RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OCLNQ16625 522 aa7.34□□□□□ -1.23
LSM5-205ENST00000409952 LYPD4Q6UWN0 246 aa7.34□□□□□ -1.23
LSM5-205ENST00000409952 ABHD17AQ96GS6 310 aa7.34□□□□□ -1.23
LSM5-205ENST00000409952 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
LSM5-205ENST00000409952 PHACTR1Q9C0D0 580 aa7.34□□□□□ -1.23
LSM5-205ENST00000409952 H3BRB1 525 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 FOXO3O43524 673 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 CELA2BP08218 269 aaPredicted RBP7.33□□□□□ -1.24
LSM5-205ENST00000409952 MAPTP10636 758 aaKnown RBP7.33□□□□□ -1.24
LSM5-205ENST00000409952 FGFR3P22607 806 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 SCNN1AP37088 669 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 LAMC2Q13753 1193 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 ACDQ96AP0 544 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 ASB16Q96NS5 453 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 CHMP4AQ9BY43 222 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 TUT1Q9H6E5 874 aaKnown RBP7.33□□□□□ -1.24
LSM5-205ENST00000409952 PPP1R1BQ9UD71 204 aaPredicted RBP7.33□□□□□ -1.24
LSM5-205ENST00000409952 CHMP3Q9Y3E7 222 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 HCN4Q9Y3Q4 1203 aa7.33□□□□□ -1.24
LSM5-205ENST00000409952 ICMTO60725 284 aa7.32□□□□□ -1.24
LSM5-205ENST00000409952 ABL1P00519 1130 aa7.32□□□□□ -1.24
LSM5-205ENST00000409952 MAPK1P28482 360 aa7.32□□□□□ -1.24
LSM5-205ENST00000409952 CTBSQ01459 385 aa7.32□□□□□ -1.24
LSM5-205ENST00000409952 TAGLNQ01995 201 aaKnown RBP7.32□□□□□ -1.24
LSM5-205ENST00000409952 GLYCTKQ8IVS8 523 aa7.32□□□□□ -1.24
LSM5-205ENST00000409952 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
LSM5-205ENST00000409952 ADAMTS8Q9UP79 889 aa7.32□□□□□ -1.24
LSM5-205ENST00000409952 NCLP19338 710 aaKnown RBP7.31□□□□□ -1.24
LSM5-205ENST00000409952 KCNQ4P56696 695 aa7.31□□□□□ -1.24
LSM5-205ENST00000409952 ZNF211Q13398 564 aaPredicted RBP7.31□□□□□ -1.24
LSM5-205ENST00000409952 RTN1Q16799 776 aa7.31□□□□□ -1.24
LSM5-205ENST00000409952 TSNAXIP1Q2TAA8 658 aa7.31□□□□□ -1.24
LSM5-205ENST00000409952 BICDL1Q6ZP65 573 aa7.31□□□□□ -1.24
LSM5-205ENST00000409952 ZSCAN29Q8IWY8 852 aaPredicted RBP7.31□□□□□ -1.24
LSM5-205ENST00000409952 RHPN1Q8TCX5 695 aa7.31□□□□□ -1.24
LSM5-205ENST00000409952 DCTN4Q9UJW0 460 aa7.31□□□□□ -1.24
LSM5-205ENST00000409952 EIF5BO60841 1220 aaKnown RBP7.3□□□□□ -1.24
LSM5-205ENST00000409952 LGR5O75473 907 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 ERCC5P28715 1186 aaPredicted RBP7.3□□□□□ -1.24
LSM5-205ENST00000409952 IER5Q5VY09 327 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 LRRC69Q6ZNQ3 347 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 MYO19Q96H55 970 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 SUSD3Q96L08 255 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 QTRT2Q9H974 415 aaKnown RBP7.3□□□□□ -1.24
LSM5-205ENST00000409952 STRN4Q9NRL3 753 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 CXXC1Q9P0U4 656 aaPredicted RBP7.3□□□□□ -1.24
LSM5-205ENST00000409952 CADPSQ9ULU8 1353 aa7.3□□□□□ -1.24
LSM5-205ENST00000409952 DCDC2BA2VCK2 349 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 PRMT3O60678 531 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 ARAFP10398 606 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 BCRP11274 1271 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 SVOPQ8N4V2 548 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 ZNF280CQ8ND82 737 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 CHMP7Q8WUX9 453 aaPredicted RBP7.29□□□□□ -1.24
LSM5-205ENST00000409952 COL26A1Q96A83 441 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
LSM5-205ENST00000409952 AVENQ9NQS1 362 aaPredicted RBP7.29□□□□□ -1.24
LSM5-205ENST00000409952 ANKIB1Q9P2G1 1089 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 DMGDHQ9UI17 866 aaKnown RBP7.29□□□□□ -1.24
LSM5-205ENST00000409952 BCS1LQ9Y276 419 aa7.29□□□□□ -1.24
LSM5-205ENST00000409952 KHNYNO15037 678 aaKnown RBP7.28□□□□□ -1.24
LSM5-205ENST00000409952 OIP5O43482 229 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 TYRO3Q06418 890 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 KCNMA1Q12791 1236 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 FKBP5Q13451 457 aaPredicted RBP7.28□□□□□ -1.24
LSM5-205ENST00000409952 HIF1AQ16665 826 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 EAPPQ56P03 285 aaPredicted RBP7.28□□□□□ -1.24
LSM5-205ENST00000409952 C1orf229Q6ZS94 237 aaPredicted RBP7.28□□□□□ -1.24
LSM5-205ENST00000409952 MDFIQ99750 246 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 ANO2Q9NQ90 1003 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 KLF15Q9UIH9 416 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 GDF2Q9UK05 429 aaPredicted RBP7.28□□□□□ -1.24
LSM5-205ENST00000409952 GJA3Q9Y6H8 435 aa7.28□□□□□ -1.24
LSM5-205ENST00000409952 SCAMP3O14828 347 aaKnown RBP7.27□□□□□ -1.25
LSM5-205ENST00000409952 BMP4P12644 408 aa7.27□□□□□ -1.25
LSM5-205ENST00000409952 SLCO4C1Q6ZQN7 724 aa7.27□□□□□ -1.25
LSM5-205ENST00000409952 HSH2DQ96JZ2 352 aa7.27□□□□□ -1.25
LSM5-205ENST00000409952 MARK1Q9P0L2 795 aa7.27□□□□□ -1.25
LSM5-205ENST00000409952 TGFBR3LH3BV60 316 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 CD33P20138 364 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 ANKRD13AQ8IZ07 590 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 RGL4Q8IZJ4 473 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 GOLGA6L1Q8N7Z2 621 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 PRIMPOLQ96LW4 560 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 BACH2Q9BYV9 841 aa7.26□□□□□ -1.25
LSM5-205ENST00000409952 HDLBPQ00341 1268 aaKnown RBP7.25□□□□□ -1.25
LSM5-205ENST00000409952 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
LSM5-205ENST00000409952 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
LSM5-205ENST00000409952 MRPL58Q14197 206 aaKnown RBP7.25□□□□□ -1.25
LSM5-205ENST00000409952 ZNF468Q5VIY5 522 aaPredicted RBP7.25□□□□□ -1.25
LSM5-205ENST00000409952 BTLAQ7Z6A9 289 aa7.25□□□□□ -1.25
LSM5-205ENST00000409952 TMEM151AQ8N4L1 468 aa7.25□□□□□ -1.25
LSM5-205ENST00000409952 GTF3C2Q8WUA4 911 aaPredicted RBP7.25□□□□□ -1.25
LSM5-205ENST00000409952 LRFN2Q9ULH4 789 aa7.25□□□□□ -1.25
LSM5-205ENST00000409952 GRNP28799 593 aaKnown RBP7.24□□□□□ -1.25
LSM5-205ENST00000409952 ARHGAP4P98171 946 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 MAP3K10Q02779 954 aa7.24□□□□□ -1.25
LSM5-205ENST00000409952 FKBP4Q02790 459 aaKnown RBP eCLIP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms