RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
LRPPRC-203ENST00000409946 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
LRPPRC-203ENST00000409946 GIGYF2Q6Y7W6 1299 aaKnown RBP21.66■■□□□ 1.06
LRPPRC-203ENST00000409946 SIL1Q9H173 461 aa21.66■■□□□ 1.06
LRPPRC-203ENST00000409946 OSBPL3Q9H4L5 887 aa21.66■■□□□ 1.06
LRPPRC-203ENST00000409946 AK9Q5TCS8 1911 aa21.65■■□□□ 1.06
LRPPRC-203ENST00000409946 RABL6Q3YEC7 729 aaPredicted RBP21.65■■□□□ 1.06
LRPPRC-203ENST00000409946 TBC1D9Q6ZT07 1266 aa21.65■■□□□ 1.06
LRPPRC-203ENST00000409946 DZIP3Q86Y13 1208 aaKnown RBP21.65■■□□□ 1.06
LRPPRC-203ENST00000409946 SDSP20132 328 aa21.64■■□□□ 1.06
LRPPRC-203ENST00000409946 GPTP24298 496 aa21.64■■□□□ 1.06
LRPPRC-203ENST00000409946 FOXO4P98177 505 aa21.64■■□□□ 1.06
LRPPRC-203ENST00000409946 SEPT12Q8IYM1 358 aa21.64■■□□□ 1.06
LRPPRC-203ENST00000409946 QTRT2Q9H974 415 aaKnown RBP21.64■■□□□ 1.06
LRPPRC-203ENST00000409946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.64■■□□□ 1.06
LRPPRC-203ENST00000409946 EIF5P55010 431 aaKnown RBP21.64■■□□□ 1.05
LRPPRC-203ENST00000409946 RFX5P48382 616 aaPredicted RBP21.63■■□□□ 1.05
LRPPRC-203ENST00000409946 LMBR1LQ6UX01 489 aa21.63■■□□□ 1.05
LRPPRC-203ENST00000409946 ONECUT3O60422 494 aaPredicted RBP21.62■■□□□ 1.05
LRPPRC-203ENST00000409946 CDC45O75419 566 aa21.62■■□□□ 1.05
LRPPRC-203ENST00000409946 UPF2Q9HAU5 1272 aaKnown RBP21.62■■□□□ 1.05
LRPPRC-203ENST00000409946 SASH1O94885 1247 aa21.62■■□□□ 1.05
LRPPRC-203ENST00000409946 LINC00116Q8NCU8 138 aa21.62■■□□□ 1.05
LRPPRC-203ENST00000409946 CHMP3Q9Y3E7 222 aa21.62■■□□□ 1.05
LRPPRC-203ENST00000409946 LY75O60449 1722 aa21.61■■□□□ 1.05
LRPPRC-203ENST00000409946 MYH3P11055 1940 aa21.61■■□□□ 1.05
LRPPRC-203ENST00000409946 G3BP1Q13283 466 aaKnown RBP eCLIP21.61■■□□□ 1.058e-7■■□□□ 11.9
LRPPRC-203ENST00000409946 TBC1D32Q96NH3 1257 aa21.61■■□□□ 1.05
LRPPRC-203ENST00000409946 STAP2Q9UGK3 403 aa21.61■■□□□ 1.05
LRPPRC-203ENST00000409946 BCORQ6W2J9 1755 aa21.6■■□□□ 1.05
LRPPRC-203ENST00000409946 TAF1LQ8IZX4 1826 aa21.6■■□□□ 1.05
LRPPRC-203ENST00000409946 PTPN12Q05209 780 aaKnown RBP21.6■■□□□ 1.05
LRPPRC-203ENST00000409946 TRIM28Q13263 835 aaKnown RBP21.6■■□□□ 1.05
LRPPRC-203ENST00000409946 FAM89AQ96GI7 184 aa21.6■■□□□ 1.05
LRPPRC-203ENST00000409946 NLRP10Q86W26 655 aa21.59■■□□□ 1.05
LRPPRC-203ENST00000409946 ERC1Q8IUD2 1116 aa21.59■■□□□ 1.05
LRPPRC-203ENST00000409946 SYNE4Q8N205 404 aa21.59■■□□□ 1.05
LRPPRC-203ENST00000409946 ERVV-1B6SEH8 477 aa21.58■■□□□ 1.05
LRPPRC-203ENST00000409946 HSP90AB3PQ58FF7 597 aa21.58■■□□□ 1.05
LRPPRC-203ENST00000409946 CLASRPQ8N2M8 674 aaKnown RBP21.58■■□□□ 1.05
LRPPRC-203ENST00000409946 COPRSQ9NQ92 184 aa21.58■■□□□ 1.05
LRPPRC-203ENST00000409946 PCCAP05165 728 aaPredicted RBP21.57■■□□□ 1.04
LRPPRC-203ENST00000409946 UBN2Q6ZU65 1347 aa21.57■■□□□ 1.04
LRPPRC-203ENST00000409946 ZBTB38Q8NAP3 1195 aaPredicted RBP21.57■■□□□ 1.04
LRPPRC-203ENST00000409946 PI4K2BQ8TCG2 481 aa21.57■■□□□ 1.04
LRPPRC-203ENST00000409946 AOX1Q06278 1338 aa21.57■■□□□ 1.04
LRPPRC-203ENST00000409946 SMIM5Q71RC9 77 aa21.56■■□□□ 1.04
LRPPRC-203ENST00000409946 AACSQ86V21 672 aa21.56■■□□□ 1.04
LRPPRC-203ENST00000409946 C22orf23Q9BZE7 217 aa21.56■■□□□ 1.04
LRPPRC-203ENST00000409946 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
LRPPRC-203ENST00000409946 TRIM6-TRIM34B2RNG4 842 aa21.55■■□□□ 1.04
LRPPRC-203ENST00000409946 MAP4K4O95819 1239 aaPredicted RBP21.55■■□□□ 1.04
LRPPRC-203ENST00000409946 EAF2Q96CJ1 260 aaPredicted RBP21.55■■□□□ 1.04
LRPPRC-203ENST00000409946 CCDC85AQ96PX6 553 aaPredicted RBP21.55■■□□□ 1.04
LRPPRC-203ENST00000409946 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
LRPPRC-203ENST00000409946 RILPL2Q969X0 211 aa21.54■■□□□ 1.04
LRPPRC-203ENST00000409946 ZNF594Q96JF6 807 aaPredicted RBP21.54■■□□□ 1.04
LRPPRC-203ENST00000409946 CCDC8Q9H0W5 538 aaPredicted RBP21.54■■□□□ 1.04
LRPPRC-203ENST00000409946 TLR7Q9NYK1 1049 aaKnown RBP21.54■■□□□ 1.04
LRPPRC-203ENST00000409946 USP42Q9H9J4 1324 aaKnown RBP21.53■■□□□ 1.04
LRPPRC-203ENST00000409946 IFIT2P09913 472 aaKnown RBP21.53■■□□□ 1.04
LRPPRC-203ENST00000409946 CNTNAP4Q9C0A0 1308 aa21.53■■□□□ 1.04
LRPPRC-203ENST00000409946 TFCP2Q12800 502 aa21.52■■□□□ 1.04
LRPPRC-203ENST00000409946 TRMT112Q9UI30 125 aaKnown RBP21.52■■□□□ 1.04
LRPPRC-203ENST00000409946 CCNL1Q9UK58 526 aaPredicted RBP21.52■■□□□ 1.04
LRPPRC-203ENST00000409946 SCN7AQ01118 1682 aa21.52■■□□□ 1.04
LRPPRC-203ENST00000409946 CDHR2Q9BYE9 1310 aa21.52■■□□□ 1.04
LRPPRC-203ENST00000409946 DDX60Q8IY21 1712 aaKnown RBP21.51■■□□□ 1.03
LRPPRC-203ENST00000409946 FAM177BA6PVY3 158 aa21.51■■□□□ 1.03
LRPPRC-203ENST00000409946 SLC4A3P48751 1232 aa21.51■■□□□ 1.03
LRPPRC-203ENST00000409946 PLA2G12BQ9BX93 195 aa21.51■■□□□ 1.03
LRPPRC-203ENST00000409946 TTC41PQ6P2S7 1318 aa21.51■■□□□ 1.03
LRPPRC-203ENST00000409946 C4BP0C0L5 1744 aa21.5■■□□□ 1.03
LRPPRC-203ENST00000409946 SUSD4Q5VX71 490 aa21.5■■□□□ 1.03
LRPPRC-203ENST00000409946 ATG9AQ7Z3C6 839 aa21.5■■□□□ 1.03
LRPPRC-203ENST00000409946 IRS4O14654 1257 aaPredicted RBP21.49■■□□□ 1.03
LRPPRC-203ENST00000409946 LRRC24Q50LG9 513 aa21.49■■□□□ 1.03
LRPPRC-203ENST00000409946 ECHDC1Q9NTX5 307 aa21.49■■□□□ 1.03
LRPPRC-203ENST00000409946 CASZ1Q86V15 1759 aa21.49■■□□□ 1.03
LRPPRC-203ENST00000409946 LAMB2P55268 1798 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 TNNI3KQ59H18 835 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 CASC1Q6TDU7 716 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 KRT27Q7Z3Y8 459 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 PUS3Q9BZE2 481 aaKnown RBP21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 FPGT-TNNI3KV9GXZ4 949 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 C4AP0C0L4 1744 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 CSF1RP07333 972 aa21.48■■□□□ 1.03
LRPPRC-203ENST00000409946 EP400Q96L91 3159 aa21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 GLRX3O76003 335 aaKnown RBP21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 RBM25P49756 843 aaKnown RBP21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 CTSWP56202 376 aa21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 CCDC57Q2TAC2 916 aa21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 AMIGO3Q86WK7 504 aa21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 GPATCH3Q96I76 525 aa21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 BCL11BQ9C0K0 894 aaPredicted RBP21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 NIP7Q9Y221 180 aaKnown RBP eCLIP21.47■■□□□ 1.03
LRPPRC-203ENST00000409946 EYA2O00167 538 aa21.46■■□□□ 1.03
LRPPRC-203ENST00000409946 GNPATO15228 680 aa21.46■■□□□ 1.03
LRPPRC-203ENST00000409946 CHMLP26374 656 aa21.46■■□□□ 1.03
LRPPRC-203ENST00000409946 TTLL11Q8NHH1 800 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms