RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 RNF123Q5XPI4 1314 aa23.25■■□□□ 1.31
ITM2C-204ENST00000409704 C7orf43Q8WVR3 580 aa23.24■■□□□ 1.31
ITM2C-204ENST00000409704 TAOK3Q9H2K8 898 aa23.24■■□□□ 1.31
ITM2C-204ENST00000409704 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
ITM2C-204ENST00000409704 NCBP3Q53F19 620 aaKnown RBP23.23■■□□□ 1.31
ITM2C-204ENST00000409704 CCDC93Q567U6 631 aa23.23■■□□□ 1.31
ITM2C-204ENST00000409704 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
ITM2C-204ENST00000409704 HYPKQ9NX55 129 aa23.23■■□□□ 1.31
ITM2C-204ENST00000409704 KDM2BQ8NHM5 1336 aa23.23■■□□□ 1.31
ITM2C-204ENST00000409704 TCIRG1Q13488 830 aa23.22■■□□□ 1.31
ITM2C-204ENST00000409704 NLRP10Q86W26 655 aa23.22■■□□□ 1.31
ITM2C-204ENST00000409704 PLBD2Q8NHP8 589 aa23.22■■□□□ 1.31
ITM2C-204ENST00000409704 UTP14AQ9BVJ6 771 aaKnown RBP23.22■■□□□ 1.31
ITM2C-204ENST00000409704 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
ITM2C-204ENST00000409704 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
ITM2C-204ENST00000409704 TSR2Q969E8 191 aaKnown RBP23.21■■□□□ 1.31
ITM2C-204ENST00000409704 WDR90Q96KV7 1748 aa23.2■■□□□ 1.3
ITM2C-204ENST00000409704 IL16Q14005 1332 aa23.2■■□□□ 1.3
ITM2C-204ENST00000409704 ELL2O00472 640 aaPredicted RBP23.2■■□□□ 1.3
ITM2C-204ENST00000409704 ALDH1B1P30837 517 aa23.2■■□□□ 1.3
ITM2C-204ENST00000409704 C3orf67Q6ZVT6 689 aa23.2■■□□□ 1.3
ITM2C-204ENST00000409704 HOXA10P31260 410 aaPredicted RBP23.19■■□□□ 1.3
ITM2C-204ENST00000409704 OLFM4Q6UX06 510 aa23.18■■□□□ 1.3
ITM2C-204ENST00000409704 ANKRD13DQ6ZTN6 518 aa23.18■■□□□ 1.3
ITM2C-204ENST00000409704 FKBP4Q02790 459 aaKnown RBP eCLIP23.17■■□□□ 1.3
ITM2C-204ENST00000409704 TSPYL6Q8N831 410 aa23.17■■□□□ 1.3
ITM2C-204ENST00000409704 SH3TC1Q8TE82 1336 aa23.16■■□□□ 1.3
ITM2C-204ENST00000409704 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
ITM2C-204ENST00000409704 SLC10A5Q5PT55 438 aa23.16■■□□□ 1.3
ITM2C-204ENST00000409704 NLRP3Q96P20 1036 aa23.16■■□□□ 1.3
ITM2C-204ENST00000409704 ISCA1Q9BUE6 129 aa23.16■■□□□ 1.3
ITM2C-204ENST00000409704 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
ITM2C-204ENST00000409704 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
ITM2C-204ENST00000409704 CCDC30Q5VVM6 783 aa23.15■■□□□ 1.3
ITM2C-204ENST00000409704 RBM17Q96I25 401 aaKnown RBP23.15■■□□□ 1.3
ITM2C-204ENST00000409704 CRAMP1Q96RY5 1269 aa23.15■■□□□ 1.3
ITM2C-204ENST00000409704 TRMT112Q9UI30 125 aaKnown RBP23.15■■□□□ 1.3
ITM2C-204ENST00000409704 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
ITM2C-204ENST00000409704 LRRC37AA6NMS7 1700 aa23.14■■□□□ 1.3
ITM2C-204ENST00000409704 TOMM70O94826 608 aa23.14■■□□□ 1.29
ITM2C-204ENST00000409704 RTKN2Q8IZC4 609 aa23.14■■□□□ 1.29
ITM2C-204ENST00000409704 ABCC4O15439 1325 aa23.13■■□□□ 1.29
ITM2C-204ENST00000409704 PPEF1O14829 653 aaPredicted RBP23.13■■□□□ 1.29
ITM2C-204ENST00000409704 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
ITM2C-204ENST00000409704 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
ITM2C-204ENST00000409704 SYNE4Q8N205 404 aa23.13■■□□□ 1.29
ITM2C-204ENST00000409704 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
ITM2C-204ENST00000409704 ATP5J2-PTCD1G3V325 749 aa23.12■■□□□ 1.29
ITM2C-204ENST00000409704 TAF1P21675 1872 aa23.12■■□□□ 1.29
ITM2C-204ENST00000409704 SLC51AQ86UW1 340 aa23.12■■□□□ 1.29
ITM2C-204ENST00000409704 ZNF428Q96B54 188 aa23.12■■□□□ 1.29
ITM2C-204ENST00000409704 RRAGCQ9HB90 399 aa23.12■■□□□ 1.29
ITM2C-204ENST00000409704 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
ITM2C-204ENST00000409704 SALL2Q9Y467 1007 aaPredicted RBP23.12■■□□□ 1.29
ITM2C-204ENST00000409704 TWISTNBQ3B726 338 aaPredicted RBP23.11■■□□□ 1.29
ITM2C-204ENST00000409704 CC2D2BQ6DHV5 1058 aa23.11■■□□□ 1.29
ITM2C-204ENST00000409704 RIC3Q7Z5B4 369 aa23.11■■□□□ 1.29
ITM2C-204ENST00000409704 WDR63Q8IWG1 891 aa23.11■■□□□ 1.29
ITM2C-204ENST00000409704 C16orf71Q8IYS4 520 aaPredicted RBP23.11■■□□□ 1.29
ITM2C-204ENST00000409704 PSMD1Q99460 953 aa23.11■■□□□ 1.29
ITM2C-204ENST00000409704 COL4A5P29400 1685 aa23.11■■□□□ 1.29
ITM2C-204ENST00000409704 HSPA6P17066 643 aa23.1■■□□□ 1.29
ITM2C-204ENST00000409704 RBM46Q8TBY0 533 aaKnown RBP23.1■■□□□ 1.29
ITM2C-204ENST00000409704 CACNA1FO60840 1977 aa23.1■■□□□ 1.29
ITM2C-204ENST00000409704 TRIM28Q13263 835 aaKnown RBP23.09■■□□□ 1.29
ITM2C-204ENST00000409704 COL4A1P02462 1669 aa23.09■■□□□ 1.29
ITM2C-204ENST00000409704 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.29
ITM2C-204ENST00000409704 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
ITM2C-204ENST00000409704 DPY19L2Q6NUT2 758 aa23.08■■□□□ 1.29
ITM2C-204ENST00000409704 FAM89AQ96GI7 184 aa23.08■■□□□ 1.29
ITM2C-204ENST00000409704 MYD88Q99836 296 aa23.08■■□□□ 1.29
ITM2C-204ENST00000409704 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
ITM2C-204ENST00000409704 CEP350Q5VT06 3117 aa23.07■■□□□ 1.28
ITM2C-204ENST00000409704 SCN4AP35499 1836 aa23.07■■□□□ 1.28
ITM2C-204ENST00000409704 DUOX1Q9NRD9 1551 aa23.06■■□□□ 1.28
ITM2C-204ENST00000409704 TCERG1O14776 1098 aaKnown RBP23.06■■□□□ 1.28
ITM2C-204ENST00000409704 VEGFAP15692 232 aaPredicted RBP23.06■■□□□ 1.28
ITM2C-204ENST00000409704 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
ITM2C-204ENST00000409704 ZNF541Q9H0D2 1346 aa23.06■■□□□ 1.28
ITM2C-204ENST00000409704 POTECB2RU33 542 aa23.05■■□□□ 1.28
ITM2C-204ENST00000409704 GRAPQ13588 217 aa23.05■■□□□ 1.28
ITM2C-204ENST00000409704 DDX46Q7L014 1031 aaKnown RBP23.05■■□□□ 1.28
ITM2C-204ENST00000409704 GRAPLQ8TC17 118 aaPredicted RBP23.05■■□□□ 1.28
ITM2C-204ENST00000409704 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
ITM2C-204ENST00000409704 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
ITM2C-204ENST00000409704 MYH3P11055 1940 aa23.04■■□□□ 1.28
ITM2C-204ENST00000409704 DDNO94850 711 aaPredicted RBP23.04■■□□□ 1.28
ITM2C-204ENST00000409704 RTL5Q5HYW3 569 aaPredicted RBP23.04■■□□□ 1.28
ITM2C-204ENST00000409704 SPINK5Q9NQ38 1064 aaPredicted RBP23.04■■□□□ 1.28
ITM2C-204ENST00000409704 MAP3K2Q9Y2U5 619 aa23.04■■□□□ 1.28
ITM2C-204ENST00000409704 LTBP1Q14766 1721 aa23.04■■□□□ 1.28
ITM2C-204ENST00000409704 IRS4O14654 1257 aaPredicted RBP23.03■■□□□ 1.28
ITM2C-204ENST00000409704 FSTL1Q12841 308 aa23.03■■□□□ 1.28
ITM2C-204ENST00000409704 ZBTB38Q8NAP3 1195 aaPredicted RBP23.03■■□□□ 1.28
ITM2C-204ENST00000409704 CCDC191Q8NCU4 936 aa23.03■■□□□ 1.28
ITM2C-204ENST00000409704 SF3B3Q15393 1217 aaKnown RBP23.02■■□□□ 1.28
ITM2C-204ENST00000409704 KSR2Q6VAB6 950 aa23.02■■□□□ 1.28
ITM2C-204ENST00000409704 CWC25Q9NXE8 425 aaPredicted RBP23.02■■□□□ 1.28
ITM2C-204ENST00000409704 ZNF521Q96K83 1311 aa23.02■■□□□ 1.28
ITM2C-204ENST00000409704 PI4KAP2A4QPH2 592 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms