RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 PTPRCP08575 1304 aa8.88□□□□□ -0.99
SH3D19-203ENST00000409598 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
SH3D19-203ENST00000409598 RPAP2Q8IXW5 612 aaPredicted RBP8.88□□□□□ -0.99
SH3D19-203ENST00000409598 KIF1BPQ96EK5 621 aa8.88□□□□□ -0.99
SH3D19-203ENST00000409598 DNMT1P26358 1616 aaKnown RBP8.88□□□□□ -0.99
SH3D19-203ENST00000409598 RIMS1Q86UR5 1692 aaKnown RBP8.88□□□□□ -0.99
SH3D19-203ENST00000409598 PDE8AO60658 829 aa8.88□□□□□ -0.99
SH3D19-203ENST00000409598 KSR2Q6VAB6 950 aa8.88□□□□□ -0.99
SH3D19-203ENST00000409598 ABCA9Q8IUA7 1624 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 HOXD10P28358 340 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 ATP2B3Q16720 1220 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.87□□□□□ -0.998e-15■■■■■ 50.2
SH3D19-203ENST00000409598 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 PTMAP06454 111 aaKnown RBP8.87□□□□□ -0.99
SH3D19-203ENST00000409598 NPR1P16066 1061 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 IMMTQ16891 758 aaKnown RBP8.87□□□□□ -0.99
SH3D19-203ENST00000409598 DNTTIP2Q5QJE6 756 aaKnown RBP8.87□□□□□ -0.99
SH3D19-203ENST00000409598 ABCC3O15438 1527 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 CA8P35219 290 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 NAA16Q6N069 864 aaPredicted RBP8.87□□□□□ -0.99
SH3D19-203ENST00000409598 DRC1Q96MC2 740 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 PODXL2Q9NZ53 605 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 DENND2AQ9ULE3 1009 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 RTL1A6NKG5 1358 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 PICALMQ13492 652 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 MTHFSDQ2M296 383 aaKnown RBP8.87□□□□□ -0.99
SH3D19-203ENST00000409598 ANKRD20A12PQ8NF67 263 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 WDR66Q8TBY9 1149 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 PKNOX2Q96KN3 472 aa8.87□□□□□ -0.99
SH3D19-203ENST00000409598 CDKL5O76039 1030 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 SSFA2P28290 1259 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 CREBRFQ8IUR6 639 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 NUP133Q8WUM0 1156 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 MTFR1LQ9H019 292 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 NOB1Q9ULX3 412 aaKnown RBP8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PHKG2P15735 406 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PLCB2Q00722 1185 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 STK11IPQ8N1F8 1099 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PLBD2Q8NHP8 589 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 GCC1Q96CN9 775 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PI4KAP2A4QPH2 592 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 BBOX1O75936 387 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 IL15P40933 162 aaPredicted RBP8.86□□□□□ -0.99
SH3D19-203ENST00000409598 CIAPIN1Q6FI81 312 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PI4KAP1Q8N8J0 262 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 MASTLQ96GX5 879 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PREX2Q70Z35 1606 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 KCNQ2O43526 872 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 HIBADHP31937 336 aaKnown RBP8.86□□□□□ -0.99
SH3D19-203ENST00000409598 BMS1Q14692 1282 aaKnown RBP8.86□□□□□ -0.99
SH3D19-203ENST00000409598 ALDH1L2Q3SY69 923 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 CTCFLQ8NI51 663 aaPredicted RBP8.86□□□□□ -0.99
SH3D19-203ENST00000409598 THUMPD2Q9BTF0 503 aaKnown RBP8.86□□□□□ -0.99
SH3D19-203ENST00000409598 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
SH3D19-203ENST00000409598 PPEF1O14829 653 aaPredicted RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 PTMSP20962 102 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 PDE4AP27815 886 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 IREB2P48200 963 aaKnown RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 PRKG1Q13976 671 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 SYAP1Q96A49 352 aaPredicted RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 PALLDQ8WX93 1383 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 PRAG1Q86YV5 1406 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 CRKLP46109 303 aaKnown RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 GZF1Q9H116 711 aaPredicted RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 DDX21Q9NR30 783 aaKnown RBP eCLIP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 RPS6KA4O75676 772 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 CCNA1P78396 465 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 BARGINQ6ZT62 677 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 SPRYD3Q8NCJ5 442 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 CCDC191Q8NCU4 936 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 ARHGEF10LQ9HCE6 1279 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 ERBB4Q15303 1308 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 HOXB7P09629 217 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 MSNP26038 577 aaKnown RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 CHPF2Q9P2E5 772 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 NOL7Q9UMY1 257 aaKnown RBP8.85□□□□□ -0.99
SH3D19-203ENST00000409598 A0A1W2PP64 1363 aa8.85□□□□□ -0.99
SH3D19-203ENST00000409598 MBD5Q9P267 1494 aa8.84□□□□□ -0.99
SH3D19-203ENST00000409598 GOLGA6L3A6NEY3 463 aa8.84□□□□□ -0.99
SH3D19-203ENST00000409598 IL6STP40189 918 aaPredicted RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 CCDC12Q8WUD4 166 aaPredicted RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 PES1O00541 588 aaKnown RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 MATR3P43243 847 aaKnown RBP eCLIP8.84□□□□□ -0.992e-6■■□□□ 13.4
SH3D19-203ENST00000409598 RPS8P62241 208 aaKnown RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 LINS1Q8NG48 757 aa8.84□□□□□ -0.99
SH3D19-203ENST00000409598 WASF1Q92558 559 aa8.84□□□□□ -0.99
SH3D19-203ENST00000409598 BMP2KQ9NSY1 1161 aaPredicted RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 CCDC196A0A1B0GTZ2 297 aa8.84□□□□□ -0.99
SH3D19-203ENST00000409598 RANBP6O60518 1105 aaKnown RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
SH3D19-203ENST00000409598 NCBP1Q09161 790 aaKnown RBP8.84□□□□□ -0.99
SH3D19-203ENST00000409598 RRP1P56182 461 aaKnown RBP8.83□□□□□ -1
SH3D19-203ENST00000409598 CENPQQ7L2Z9 268 aaPredicted RBP8.83□□□□□ -1
SH3D19-203ENST00000409598 KIF5BP33176 963 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 SLC10A4Q96EP9 437 aa8.83□□□□□ -1
SH3D19-203ENST00000409598 NBPF3Q9H094 633 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms