RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LCE2BO14633 110 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 ICMTO60725 284 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 CENPCQ03188 943 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 GLYCTKQ8IVS8 523 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 HPS1Q92902 700 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 C2orf49Q9BVC5 232 aaPredicted RBP7.66□□□□□ -1.18
CLK1-202ENST00000409403 FHDC1Q9C0D6 1143 aaPredicted RBP7.66□□□□□ -1.18
CLK1-202ENST00000409403 TUT1Q9H6E5 874 aaKnown RBP7.66□□□□□ -1.18
CLK1-202ENST00000409403 BIN2Q9UBW5 565 aaPredicted RBP7.66□□□□□ -1.18
CLK1-202ENST00000409403 PDZRN3Q9UPQ7 1066 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 CHMP3Q9Y3E7 222 aa7.66□□□□□ -1.18
CLK1-202ENST00000409403 DNMT3AQ9Y6K1 912 aaPredicted RBP7.66□□□□□ -1.18
CLK1-202ENST00000409403 SF3B2Q13435 895 aaKnown RBP7.65□□□□□ -1.18
CLK1-202ENST00000409403 NAA30Q147X3 362 aaPredicted RBP7.65□□□□□ -1.18
CLK1-202ENST00000409403 NPM2Q86SE8 214 aaKnown RBP7.65□□□□□ -1.18
CLK1-202ENST00000409403 ZNF395Q9H8N7 513 aaPredicted RBP7.65□□□□□ -1.18
CLK1-202ENST00000409403 ANO2Q9NQ90 1003 aa7.65□□□□□ -1.18
CLK1-202ENST00000409403 USP3Q9Y6I4 520 aa7.65□□□□□ -1.18
CLK1-202ENST00000409403 UGGT2Q9NYU1 1516 aa7.65□□□□□ -1.18
CLK1-202ENST00000409403 LRP6O75581 1613 aa7.64□□□□□ -1.19
CLK1-202ENST00000409403 ROBO1Q9Y6N7 1651 aa7.64□□□□□ -1.19
CLK1-202ENST00000409403 FKBP4Q02790 459 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLK1-202ENST00000409403 HELQQ8TDG4 1101 aa7.64□□□□□ -1.19
CLK1-202ENST00000409403 TSEN34Q9BSV6 310 aaKnown RBP7.64□□□□□ -1.19
CLK1-202ENST00000409403 CDK12Q9NYV4 1490 aaPredicted RBP7.64□□□□□ -1.19
CLK1-202ENST00000409403 MROH2AA6NES4 1674 aa7.64□□□□□ -1.19
CLK1-202ENST00000409403 ZSCAN10Q96SZ4 725 aaPredicted RBP7.63□□□□□ -1.19
CLK1-202ENST00000409403 RGS12O14924 1447 aa7.63□□□□□ -1.19
CLK1-202ENST00000409403 CAPN5O15484 640 aaPredicted RBP7.63□□□□□ -1.19
CLK1-202ENST00000409403 GTF2E1P29083 439 aaPredicted RBP7.63□□□□□ -1.19
CLK1-202ENST00000409403 MTMR3Q13615 1198 aa7.63□□□□□ -1.19
CLK1-202ENST00000409403 C16orf46Q6P387 395 aa7.63□□□□□ -1.19
CLK1-202ENST00000409403 PHLPP1O60346 1717 aa7.62□□□□□ -1.19
CLK1-202ENST00000409403 SERTM1A2A2V5 107 aa7.62□□□□□ -1.19
CLK1-202ENST00000409403 GPC1P35052 558 aa7.62□□□□□ -1.19
CLK1-202ENST00000409403 TEAD4Q15561 434 aa7.62□□□□□ -1.19
CLK1-202ENST00000409403 ERICH6BQ5W0A0 696 aa7.62□□□□□ -1.19
CLK1-202ENST00000409403 EML1O00423 815 aa7.61□□□□□ -1.19
CLK1-202ENST00000409403 UPP2O95045 317 aa7.61□□□□□ -1.19
CLK1-202ENST00000409403 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
CLK1-202ENST00000409403 MARSP56192 900 aaKnown RBP7.61□□□□□ -1.19
CLK1-202ENST00000409403 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
CLK1-202ENST00000409403 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
CLK1-202ENST00000409403 ZNF295-AS1Q8N0V1 137 aa7.61□□□□□ -1.19
CLK1-202ENST00000409403 FOXD4L4Q8WXT5 416 aaPredicted RBP7.61□□□□□ -1.19
CLK1-202ENST00000409403 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
CLK1-202ENST00000409403 ZNF232Q9UNY5 417 aa7.61□□□□□ -1.19
CLK1-202ENST00000409403 SPINT1O43278 529 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 NOS2P35228 1153 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 SLC27A3Q5K4L6 730 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 LINC00528Q8N1L1 170 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 RHBDD1Q8TEB9 315 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 L3MBTL2Q969R5 705 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 INSM2Q96T92 566 aaPredicted RBP7.6□□□□□ -1.19
CLK1-202ENST00000409403 NIFKQ9BYG3 293 aaKnown RBP7.6□□□□□ -1.19
CLK1-202ENST00000409403 SAP130Q9H0E3 1048 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 DIP2CQ9Y2E4 1556 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 NHSL1Q5SYE7 1610 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 CDK13Q14004 1512 aaKnown RBP7.6□□□□□ -1.19
CLK1-202ENST00000409403 KDM5CP41229 1560 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 DNMT1P26358 1616 aaKnown RBP7.6□□□□□ -1.19
CLK1-202ENST00000409403 ABCA6Q8N139 1617 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 ERCC3P19447 782 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 RNF144AP50876 292 aaPredicted RBP7.6□□□□□ -1.19
CLK1-202ENST00000409403 ECM1Q16610 540 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 MYO19Q96H55 970 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 GRIP2Q9C0E4 1043 aa7.6□□□□□ -1.19
CLK1-202ENST00000409403 QTRT2Q9H974 415 aaKnown RBP7.6□□□□□ -1.19
CLK1-202ENST00000409403 NPATQ14207 1427 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 FAM13AO94988 1023 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 NPR3P17342 541 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 COX20Q5RI15 118 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 SH3PXD2AQ5TCZ1 1133 aa7.59□□□□□ -1.19
CLK1-202ENST00000409403 DNAJC14Q6Y2X3 702 aaPredicted RBP7.59□□□□□ -1.19
CLK1-202ENST00000409403 ALDH16A1Q8IZ83 802 aa7.58□□□□□ -1.2
CLK1-202ENST00000409403 NGLY1Q96IV0 654 aa7.58□□□□□ -1.2
CLK1-202ENST00000409403 POLMQ9NP87 494 aaPredicted RBP7.58□□□□□ -1.2
CLK1-202ENST00000409403 AMOTL2Q9Y2J4 779 aa7.58□□□□□ -1.2
CLK1-202ENST00000409403 PARP3Q9Y6F1 533 aa7.58□□□□□ -1.2
CLK1-202ENST00000409403 ATP10BO94823 1461 aa7.58□□□□□ -1.2
CLK1-202ENST00000409403 FAM187AA6NFU0 413 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 MPSTP25325 297 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 RXRBP28702 533 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 STIM2Q9P246 746 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 HCN4Q9Y3Q4 1203 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLK1-202ENST00000409403 CLTCQ00610 1675 aaKnown RBP7.57□□□□□ -1.2
CLK1-202ENST00000409403 IQGAP1P46940 1657 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 REREQ9P2R6 1566 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 AGLP35573 1532 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 TNFRSF10BO14763 440 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 BMP2P12643 396 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 CTSOP43234 321 aaPredicted RBP7.57□□□□□ -1.2
CLK1-202ENST00000409403 RANGAP1P46060 587 aaPredicted RBP7.57□□□□□ -1.2
CLK1-202ENST00000409403 RTN1Q16799 776 aa7.57□□□□□ -1.2
CLK1-202ENST00000409403 MRPL14Q6P1L8 145 aaKnown RBP7.57□□□□□ -1.2
CLK1-202ENST00000409403 DCTN4Q9UJW0 460 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms