RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 RBM8AQ9Y5S9 174 aaKnown RBP15.03■□□□□ -0
ATG9A-203ENST00000409033 PRIM1P49642 420 aaKnown RBP15.02□□□□□ -0.01
ATG9A-203ENST00000409033 CEBPZQ03701 1054 aaKnown RBP15.02□□□□□ -0.01
ATG9A-203ENST00000409033 TTC39AQ5SRH9 613 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 RASEFQ8IZ41 740 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 EVI5LQ96CN4 794 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 SEC62Q99442 399 aaKnown RBP15.02□□□□□ -0.01
ATG9A-203ENST00000409033 SASH1O94885 1247 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 HAND2P61296 217 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 RAB3GAP1Q15042 981 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 WDR17Q8IZU2 1322 aa15.02□□□□□ -0.01
ATG9A-203ENST00000409033 METTL24Q5JXM2 366 aa15.01□□□□□ -0.01
ATG9A-203ENST00000409033 BLOC1S2Q6QNY1 142 aa15.01□□□□□ -0.01
ATG9A-203ENST00000409033 SYNE4Q8N205 404 aa15.01□□□□□ -0.01
ATG9A-203ENST00000409033 IFIT1P09914 478 aaKnown RBP15.01□□□□□ -0.01
ATG9A-203ENST00000409033 SGSM2O43147 1006 aa15.01□□□□□ -0.01
ATG9A-203ENST00000409033 AK2P54819 239 aa15.01□□□□□ -0.01
ATG9A-203ENST00000409033 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.01□□□□□ -0.01
ATG9A-203ENST00000409033 MEGF6O75095 1541 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 CHST3Q7LGC8 479 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 PLBD2Q8NHP8 589 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 PI4K2BQ8TCG2 481 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 IQSEC3Q9UPP2 1182 aaPredicted RBP15□□□□□ -0.01
ATG9A-203ENST00000409033 A0A0D9SFI3 127 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 IDH1O75874 414 aaKnown RBP15□□□□□ -0.01
ATG9A-203ENST00000409033 LRRC24Q50LG9 513 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 FAM182BQ5T319 152 aa15□□□□□ -0.01
ATG9A-203ENST00000409033 NALCNQ8IZF0 1738 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 TNS3Q68CZ2 1445 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 POLA2Q14181 598 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
ATG9A-203ENST00000409033 PUS3Q9BZE2 481 aaKnown RBP14.99□□□□□ -0.01
ATG9A-203ENST00000409033 H3BQV1 296 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
ATG9A-203ENST00000409033 IFFO2Q5TF58 517 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 LDHAL6AQ6ZMR3 332 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 FAM184AQ8NB25 1140 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 SNX14Q9Y5W7 946 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 NBPF26B4DH59 902 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 NBPF10Q6P3W6 841 aaKnown RBP14.99□□□□□ -0.01
ATG9A-203ENST00000409033 NBPF15Q8N660 670 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 CHMP4CQ96CF2 233 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 OSBPL3Q9H4L5 887 aa14.99□□□□□ -0.01
ATG9A-203ENST00000409033 SYCE3A1L190 88 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 MCM2P49736 904 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 ADCK5Q3MIX3 580 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 GRPEL1Q9HAV7 217 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 PDIA6Q15084 440 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 CWC22Q9HCG8 908 aaKnown RBP14.98□□□□□ -0.01
ATG9A-203ENST00000409033 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 MST1RQ04912 1400 aa14.98□□□□□ -0.01
ATG9A-203ENST00000409033 CCDC158Q5M9N0 1113 aa14.97□□□□□ -0.01
ATG9A-203ENST00000409033 CCDC24Q8N4L8 307 aa14.97□□□□□ -0.01
ATG9A-203ENST00000409033 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
ATG9A-203ENST00000409033 DBNLQ9UJU6 430 aaKnown RBP14.97□□□□□ -0.01
ATG9A-203ENST00000409033 LMTK3Q96Q04 1460 aa14.97□□□□□ -0.01
ATG9A-203ENST00000409033 FBXW7Q969H0 707 aa14.97□□□□□ -0.01
ATG9A-203ENST00000409033 XRCC6P12956 609 aaKnown RBP eCLIP14.96□□□□□ -0.015e-15■■■■■ 80.1
ATG9A-203ENST00000409033 HCLS1P14317 486 aaPredicted RBP14.96□□□□□ -0.01
ATG9A-203ENST00000409033 NAP1L5Q96NT1 182 aaPredicted RBP14.96□□□□□ -0.01
ATG9A-203ENST00000409033 FMN2Q9NZ56 1722 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 TTC41PQ6P2S7 1318 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.96□□□□□ -0.01
ATG9A-203ENST00000409033 DDB1Q16531 1140 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 PIGBQ92521 554 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 KAZALD1Q96I82 304 aa14.96□□□□□ -0.01
ATG9A-203ENST00000409033 AK9Q5TCS8 1911 aa14.96□□□□□ -0.02
ATG9A-203ENST00000409033 HIP1O00291 1037 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 NASPP49321 788 aaPredicted RBP14.95□□□□□ -0.02
ATG9A-203ENST00000409033 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
ATG9A-203ENST00000409033 GUCY1B3Q02153 619 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 LARP1BQ659C4 914 aaKnown RBP14.95□□□□□ -0.02
ATG9A-203ENST00000409033 FAM173BQ6P4H8 233 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 XRN1Q8IZH2 1706 aaKnown RBP14.95□□□□□ -0.02
ATG9A-203ENST00000409033 RAD50Q92878 1312 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 CREB3L3Q68CJ9 461 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 SMIM5Q71RC9 77 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 MPHOSPH8Q99549 860 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 PSMA5P28066 241 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 GJB2P29033 226 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 CCDC171Q6TFL3 1326 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 LTN1O94822 1766 aa14.95□□□□□ -0.02
ATG9A-203ENST00000409033 TOPAZ1Q8N9V7 1692 aa14.94□□□□□ -0.02
ATG9A-203ENST00000409033 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
ATG9A-203ENST00000409033 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
ATG9A-203ENST00000409033 ZBTB1Q9Y2K1 713 aa14.94□□□□□ -0.02
ATG9A-203ENST00000409033 KDM6AO15550 1401 aaPredicted RBP14.94□□□□□ -0.02
ATG9A-203ENST00000409033 MRE11P49959 708 aa14.94□□□□□ -0.02
ATG9A-203ENST00000409033 RRP12Q5JTH9 1297 aaKnown RBP14.94□□□□□ -0.02
ATG9A-203ENST00000409033 PTMSP20962 102 aa14.94□□□□□ -0.02
ATG9A-203ENST00000409033 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
ATG9A-203ENST00000409033 PI16Q6UXB8 463 aa14.94□□□□□ -0.02
ATG9A-203ENST00000409033 DZIP3Q86Y13 1208 aaKnown RBP14.94□□□□□ -0.02
ATG9A-203ENST00000409033 CARD10Q9BWT7 1032 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms