RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
MIR1249-201ENST00000408671 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
MIR1249-201ENST00000408671 SOX10P56693 466 aa15.34■□□□□ 0.05
MIR1249-201ENST00000408671 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
MIR1249-201ENST00000408671 NIP7Q9Y221 180 aaKnown RBP eCLIP15.34■□□□□ 0.05
MIR1249-201ENST00000408671 ABCC12Q96J65 1359 aa15.34■□□□□ 0.05
MIR1249-201ENST00000408671 KCNQ3O43525 872 aa15.33■□□□□ 0.04
MIR1249-201ENST00000408671 PIP4K2AP48426 406 aaPredicted RBP15.33■□□□□ 0.04
MIR1249-201ENST00000408671 NOGQ13253 232 aa15.33■□□□□ 0.04
MIR1249-201ENST00000408671 ZIC5Q96T25 663 aa15.33■□□□□ 0.04
MIR1249-201ENST00000408671 USP16Q9Y5T5 823 aa15.33■□□□□ 0.04
MIR1249-201ENST00000408671 COL3A1P02461 1466 aaPredicted RBP15.33■□□□□ 0.04
MIR1249-201ENST00000408671 GNAT3A8MTJ3 354 aa15.32■□□□□ 0.04
MIR1249-201ENST00000408671 HOXA10P31260 410 aaPredicted RBP15.32■□□□□ 0.04
MIR1249-201ENST00000408671 LARGE2Q8N3Y3 721 aa15.32■□□□□ 0.04
MIR1249-201ENST00000408671 GLIS2Q9BZE0 524 aaPredicted RBP15.32■□□□□ 0.04
MIR1249-201ENST00000408671 SAGE1Q9NXZ1 904 aa15.32■□□□□ 0.04
MIR1249-201ENST00000408671 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
MIR1249-201ENST00000408671 AMER1Q5JTC6 1135 aaPredicted RBP15.31■□□□□ 0.04
MIR1249-201ENST00000408671 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
MIR1249-201ENST00000408671 CDHR2Q9BYE9 1310 aa15.31■□□□□ 0.04
MIR1249-201ENST00000408671 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
MIR1249-201ENST00000408671 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
MIR1249-201ENST00000408671 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
MIR1249-201ENST00000408671 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
MIR1249-201ENST00000408671 NIM1KQ8IY84 436 aa15.3■□□□□ 0.04
MIR1249-201ENST00000408671 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
MIR1249-201ENST00000408671 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
MIR1249-201ENST00000408671 ZC3H15Q8WU90 426 aaKnown RBP15.3■□□□□ 0.04
MIR1249-201ENST00000408671 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
MIR1249-201ENST00000408671 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
MIR1249-201ENST00000408671 DIAPH1O60610 1272 aaKnown RBP15.29■□□□□ 0.04
MIR1249-201ENST00000408671 MKI67P46013 3256 aaKnown RBP15.29■□□□□ 0.04
MIR1249-201ENST00000408671 FAM177BA6PVY3 158 aa15.28■□□□□ 0.04
MIR1249-201ENST00000408671 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
MIR1249-201ENST00000408671 FAM155AB1AL88 458 aaPredicted RBP15.28■□□□□ 0.04
MIR1249-201ENST00000408671 HIRAP54198 1017 aaPredicted RBP15.28■□□□□ 0.04
MIR1249-201ENST00000408671 CXCL9Q07325 125 aa15.28■□□□□ 0.04
MIR1249-201ENST00000408671 HLFQ16534 295 aa15.28■□□□□ 0.04
MIR1249-201ENST00000408671 VPS33BQ9H267 617 aa15.28■□□□□ 0.04
MIR1249-201ENST00000408671 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
MIR1249-201ENST00000408671 SNRPA1P09661 255 aaKnown RBP15.27■□□□□ 0.04
MIR1249-201ENST00000408671 CDC37L1Q7L3B6 337 aa15.27■□□□□ 0.04
MIR1249-201ENST00000408671 PPIP5K2O43314 1243 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
MIR1249-201ENST00000408671 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
MIR1249-201ENST00000408671 HUNKP57058 714 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 RPGRQ92834 1020 aaKnown RBP15.26■□□□□ 0.03
MIR1249-201ENST00000408671 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 ZNF408Q9H9D4 720 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 ZNRF3Q9ULT6 936 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 LAMB2P55268 1798 aa15.26■□□□□ 0.03
MIR1249-201ENST00000408671 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
MIR1249-201ENST00000408671 AOC3Q16853 763 aa15.25■□□□□ 0.03
MIR1249-201ENST00000408671 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
MIR1249-201ENST00000408671 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
MIR1249-201ENST00000408671 ANKRD36CQ5JPF3 1778 aa15.24■□□□□ 0.03
MIR1249-201ENST00000408671 RGMBQ6NW40 437 aa15.24■□□□□ 0.03
MIR1249-201ENST00000408671 RTFDC1Q9BY42 306 aaPredicted RBP15.24■□□□□ 0.03
MIR1249-201ENST00000408671 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
MIR1249-201ENST00000408671 RNF186Q9NXI6 227 aa15.23■□□□□ 0.03
MIR1249-201ENST00000408671 UBN2Q6ZU65 1347 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 ERVV-1B6SEH8 477 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 KIF23Q02241 960 aaPredicted RBP15.22■□□□□ 0.03
MIR1249-201ENST00000408671 CCDC102AQ96A19 550 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
MIR1249-201ENST00000408671 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 DUOX1Q9NRD9 1551 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 LRRC37AA6NMS7 1700 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 HTTP42858 3142 aa15.22■□□□□ 0.03
MIR1249-201ENST00000408671 TRPA1O75762 1119 aa15.21■□□□□ 0.03
MIR1249-201ENST00000408671 C3orf67Q6ZVT6 689 aa15.21■□□□□ 0.03
MIR1249-201ENST00000408671 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
MIR1249-201ENST00000408671 HPS5Q9UPZ3 1129 aa15.21■□□□□ 0.03
MIR1249-201ENST00000408671 SHTN1A0MZ66 631 aa15.2■□□□□ 0.02
MIR1249-201ENST00000408671 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
MIR1249-201ENST00000408671 EIF4G2P78344 907 aaKnown RBP eCLIP15.2■□□□□ 0.02
MIR1249-201ENST00000408671 KIAA2012Q0VF49 1180 aa15.2■□□□□ 0.02
MIR1249-201ENST00000408671 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
MIR1249-201ENST00000408671 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
MIR1249-201ENST00000408671 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
MIR1249-201ENST00000408671 PHACTR3Q96KR7 559 aa15.2■□□□□ 0.02
MIR1249-201ENST00000408671 GBA2Q9HCG7 927 aaPredicted RBP15.2■□□□□ 0.02
MIR1249-201ENST00000408671 MAP3K15Q6ZN16 1313 aa15.19■□□□□ 0.02
MIR1249-201ENST00000408671 NTSR2O95665 410 aa15.19■□□□□ 0.02
MIR1249-201ENST00000408671 SLC10A3P09131 477 aa15.19■□□□□ 0.02
MIR1249-201ENST00000408671 BCL2L13Q9BXK5 485 aa15.19■□□□□ 0.02
MIR1249-201ENST00000408671 CNOT7Q9UIV1 285 aaKnown RBP15.19■□□□□ 0.02
MIR1249-201ENST00000408671 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
MIR1249-201ENST00000408671 TAF1P21675 1872 aa15.18■□□□□ 0.02
MIR1249-201ENST00000408671 CENPFP49454 3210 aa15.18■□□□□ 0.02
MIR1249-201ENST00000408671 YDJCA8MPS7 323 aa15.18■□□□□ 0.02
MIR1249-201ENST00000408671 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
MIR1249-201ENST00000408671 TNIP1Q15025 636 aa15.18■□□□□ 0.02
MIR1249-201ENST00000408671 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
MIR1249-201ENST00000408671 CSRNP1Q96S65 589 aa15.18■□□□□ 0.02
MIR1249-201ENST00000408671 ABCC4O15439 1325 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 8955 ms