RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 LMOD3Q0VAK6 560 aa25.53■■□□□ 1.68
HDAC11-205ENST00000404548 PARP10Q53GL7 1025 aa25.53■■□□□ 1.68
HDAC11-205ENST00000404548 RPGRQ92834 1020 aaKnown RBP25.53■■□□□ 1.68
HDAC11-205ENST00000404548 CRAMP1Q96RY5 1269 aa25.53■■□□□ 1.68
HDAC11-205ENST00000404548 HACL1Q9UJ83 578 aa25.53■■□□□ 1.68
HDAC11-205ENST00000404548 ADAMTSL1Q8N6G6 1762 aa25.52■■□□□ 1.68
HDAC11-205ENST00000404548 GPTP24298 496 aa25.52■■□□□ 1.68
HDAC11-205ENST00000404548 SUSD4Q5VX71 490 aa25.52■■□□□ 1.68
HDAC11-205ENST00000404548 GPC2Q8N158 579 aa25.52■■□□□ 1.68
HDAC11-205ENST00000404548 HSPA1AP0DMV8 641 aaKnown RBP25.51■■□□□ 1.67
HDAC11-205ENST00000404548 HSPA1BP0DMV9 641 aaKnown RBP25.51■■□□□ 1.67
HDAC11-205ENST00000404548 PPP1R42Q7Z4L9 355 aa25.51■■□□□ 1.67
HDAC11-205ENST00000404548 PNMA8AQ86V59 439 aaPredicted RBP25.51■■□□□ 1.67
HDAC11-205ENST00000404548 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
HDAC11-205ENST00000404548 RIPK4P57078 832 aa25.5■■□□□ 1.67
HDAC11-205ENST00000404548 PDIA6Q15084 440 aa25.5■■□□□ 1.67
HDAC11-205ENST00000404548 JDP2Q8WYK2 163 aa25.5■■□□□ 1.67
HDAC11-205ENST00000404548 EPHX2P34913 555 aa25.49■■□□□ 1.67
HDAC11-205ENST00000404548 RBM17Q96I25 401 aaKnown RBP25.49■■□□□ 1.67
HDAC11-205ENST00000404548 CNTNAP1P78357 1384 aa25.48■■□□□ 1.67
HDAC11-205ENST00000404548 ITGBL1O95965 494 aaPredicted RBP25.48■■□□□ 1.67
HDAC11-205ENST00000404548 TMPOP42166 694 aaKnown RBP25.48■■□□□ 1.67
HDAC11-205ENST00000404548 SLC10A5Q5PT55 438 aa25.47■■□□□ 1.67
HDAC11-205ENST00000404548 PPEF1O14829 653 aaPredicted RBP25.46■■□□□ 1.67
HDAC11-205ENST00000404548 COL4A5P29400 1685 aa25.45■■□□□ 1.67
HDAC11-205ENST00000404548 EAPPQ56P03 285 aaPredicted RBP25.45■■□□□ 1.66
HDAC11-205ENST00000404548 NLRP3Q96P20 1036 aa25.45■■□□□ 1.66
HDAC11-205ENST00000404548 VPS33BQ9H267 617 aa25.45■■□□□ 1.66
HDAC11-205ENST00000404548 TMEM88BA6NKF7 163 aa25.44■■□□□ 1.66
HDAC11-205ENST00000404548 EIF6P56537 245 aaKnown RBP25.44■■□□□ 1.66
HDAC11-205ENST00000404548 HSP90AB3PQ58FF7 597 aa25.44■■□□□ 1.66
HDAC11-205ENST00000404548 TNS4Q8IZW8 715 aa25.44■■□□□ 1.66
HDAC11-205ENST00000404548 UTP14AQ9BVJ6 771 aaKnown RBP25.44■■□□□ 1.66
HDAC11-205ENST00000404548 MKRN1Q9UHC7 482 aaKnown RBP25.44■■□□□ 1.66
HDAC11-205ENST00000404548 MYBBP1AQ9BQG0 1328 aaKnown RBP25.43■■□□□ 1.66
HDAC11-205ENST00000404548 EIF2S2P20042 333 aaKnown RBP25.43■■□□□ 1.66
HDAC11-205ENST00000404548 PROSER3Q2NL68 480 aa25.42■■□□□ 1.66
HDAC11-205ENST00000404548 C3orf67Q6ZVT6 689 aa25.42■■□□□ 1.66
HDAC11-205ENST00000404548 LARGE2Q8N3Y3 721 aa25.42■■□□□ 1.66
HDAC11-205ENST00000404548 ATP6V0A2Q9Y487 856 aa25.42■■□□□ 1.66
HDAC11-205ENST00000404548 TMX4Q9H1E5 349 aaPredicted RBP25.41■■□□□ 1.66
HDAC11-205ENST00000404548 ANKRD36CQ5JPF3 1778 aa25.41■■□□□ 1.66
HDAC11-205ENST00000404548 CHL1O00533 1208 aa25.4■■□□□ 1.66
HDAC11-205ENST00000404548 CLEC11AQ9Y240 323 aa25.4■■□□□ 1.66
HDAC11-205ENST00000404548 LMOD1P29536 600 aaPredicted RBP25.39■■□□□ 1.66
HDAC11-205ENST00000404548 CNTROBQ8N137 903 aa25.39■■□□□ 1.66
HDAC11-205ENST00000404548 RTFDC1Q9BY42 306 aaPredicted RBP25.39■■□□□ 1.66
HDAC11-205ENST00000404548 DDX21Q9NR30 783 aaKnown RBP eCLIP25.39■■□□□ 1.66
HDAC11-205ENST00000404548 ABCC4O15439 1325 aa25.38■■□□□ 1.65
HDAC11-205ENST00000404548 HOXB7P09629 217 aa25.38■■□□□ 1.65
HDAC11-205ENST00000404548 SCNN1DP51172 638 aa25.38■■□□□ 1.65
HDAC11-205ENST00000404548 COPS6Q7L5N1 327 aa25.38■■□□□ 1.65
HDAC11-205ENST00000404548 NLRP10Q86W26 655 aa25.38■■□□□ 1.65
HDAC11-205ENST00000404548 LTBP1Q14766 1721 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 BBOX1O75936 387 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 ANXA1P04083 346 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 NIM1KQ8IY84 436 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 SUPT20HQ8NEM7 779 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 XAGE3Q8WTP9 111 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 RUNDC1Q96C34 613 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 GJA3Q9Y6H8 435 aa25.37■■□□□ 1.65
HDAC11-205ENST00000404548 RASSF10A6NK89 507 aa25.36■■□□□ 1.65
HDAC11-205ENST00000404548 TCIRG1Q13488 830 aa25.36■■□□□ 1.65
HDAC11-205ENST00000404548 MAP1SQ66K74 1059 aaPredicted RBP25.36■■□□□ 1.65
HDAC11-205ENST00000404548 PPIP5K2O43314 1243 aa25.35■■□□□ 1.65
HDAC11-205ENST00000404548 VEGFBP49765 207 aa25.35■■□□□ 1.65
HDAC11-205ENST00000404548 USP50Q70EL3 339 aaPredicted RBP25.35■■□□□ 1.65
HDAC11-205ENST00000404548 TRIM35Q9UPQ4 493 aa25.35■■□□□ 1.65
HDAC11-205ENST00000404548 SLC51AQ86UW1 340 aa25.34■■□□□ 1.65
HDAC11-205ENST00000404548 SP8Q8IXZ3 490 aa25.34■■□□□ 1.65
HDAC11-205ENST00000404548 SH3TC1Q8TE82 1336 aa25.34■■□□□ 1.65
HDAC11-205ENST00000404548 TMC4Q7Z404 712 aa25.33■■□□□ 1.65
HDAC11-205ENST00000404548 LAMB2P55268 1798 aa25.33■■□□□ 1.65
HDAC11-205ENST00000404548 TCERG1O14776 1098 aaKnown RBP25.32■■□□□ 1.64
HDAC11-205ENST00000404548 EPS15P42566 896 aa25.32■■□□□ 1.64
HDAC11-205ENST00000404548 AIMP1Q12904 312 aaKnown RBP25.32■■□□□ 1.64
HDAC11-205ENST00000404548 WDR43Q15061 677 aaKnown RBP eCLIP25.32■■□□□ 1.64
HDAC11-205ENST00000404548 AOC3Q16853 763 aa25.32■■□□□ 1.64
HDAC11-205ENST00000404548 CCDC146Q8IYE0 955 aa25.32■■□□□ 1.64
HDAC11-205ENST00000404548 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
HDAC11-205ENST00000404548 ZNRF3Q9ULT6 936 aa25.32■■□□□ 1.64
HDAC11-205ENST00000404548 CDHR2Q9BYE9 1310 aa25.32■■□□□ 1.64
HDAC11-205ENST00000404548 DDX46Q7L014 1031 aaKnown RBP25.31■■□□□ 1.64
HDAC11-205ENST00000404548 NECTIN2Q92692 538 aa25.31■■□□□ 1.64
HDAC11-205ENST00000404548 PRDM10Q9NQV6 1147 aa25.31■■□□□ 1.64
HDAC11-205ENST00000404548 CHPF2Q9P2E5 772 aa25.31■■□□□ 1.64
HDAC11-205ENST00000404548 FOXN1O15353 648 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 HCLS1P14317 486 aaPredicted RBP25.3■■□□□ 1.64
HDAC11-205ENST00000404548 KIAA2012Q0VF49 1180 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 DDX10Q13206 875 aaKnown RBP25.3■■□□□ 1.64
HDAC11-205ENST00000404548 GRAPQ13588 217 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 NEUROD2Q15784 382 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 KRT24Q2M2I5 525 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 DEFB115Q30KQ5 88 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 HDGFL1Q5TGJ6 251 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 DPP8Q6V1X1 898 aaPredicted RBP25.3■■□□□ 1.64
HDAC11-205ENST00000404548 PLBD2Q8NHP8 589 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 GRAPLQ8TC17 118 aaPredicted RBP25.3■■□□□ 1.64
HDAC11-205ENST00000404548 GPRC5DQ9NZD1 345 aa25.3■■□□□ 1.64
HDAC11-205ENST00000404548 DBF4Q9UBU7 674 aaPredicted RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms