RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TOGARAM1Q9Y4F4 1720 aa21.62■■□□□ 1.05
CHTOP-205ENST00000403433 SNX14Q9Y5W7 946 aa21.62■■□□□ 1.05
CHTOP-205ENST00000403433 INTS4Q96HW7 963 aaKnown RBP21.61■■□□□ 1.05
CHTOP-205ENST00000403433 TLR7Q9NYK1 1049 aaKnown RBP21.61■■□□□ 1.05
CHTOP-205ENST00000403433 RFX5P48382 616 aaPredicted RBP21.61■■□□□ 1.05
CHTOP-205ENST00000403433 TJP1Q07157 1748 aa21.6■■□□□ 1.05
CHTOP-205ENST00000403433 MCTP1Q6DN14 999 aa21.59■■□□□ 1.05
CHTOP-205ENST00000403433 ARXQ96QS3 562 aa21.59■■□□□ 1.05
CHTOP-205ENST00000403433 ISY1Q9ULR0 285 aaKnown RBP21.59■■□□□ 1.05
CHTOP-205ENST00000403433 CASP7P55210 303 aa21.59■■□□□ 1.05
CHTOP-205ENST00000403433 PTPN12Q05209 780 aaKnown RBP21.59■■□□□ 1.05
CHTOP-205ENST00000403433 A1BGP04217 495 aa21.58■■□□□ 1.04
CHTOP-205ENST00000403433 TTLL7Q6ZT98 887 aa21.58■■□□□ 1.04
CHTOP-205ENST00000403433 BOLA2Q9H3K6 86 aa21.58■■□□□ 1.04
CHTOP-205ENST00000403433 CWC25Q9NXE8 425 aaPredicted RBP21.58■■□□□ 1.04
CHTOP-205ENST00000403433 FSD1Q9BTV5 496 aa21.57■■□□□ 1.04
CHTOP-205ENST00000403433 TMOD3Q9NYL9 352 aa21.57■■□□□ 1.04
CHTOP-205ENST00000403433 ZDHHC9Q9Y397 364 aa21.57■■□□□ 1.04
CHTOP-205ENST00000403433 TNNI3KQ59H18 835 aa21.57■■□□□ 1.04
CHTOP-205ENST00000403433 RASEFQ8IZ41 740 aa21.57■■□□□ 1.04
CHTOP-205ENST00000403433 FPGT-TNNI3KV9GXZ4 949 aa21.57■■□□□ 1.04
CHTOP-205ENST00000403433 CCDC171Q6TFL3 1326 aa21.56■■□□□ 1.04
CHTOP-205ENST00000403433 H7C1W4 665 aa21.56■■□□□ 1.04
CHTOP-205ENST00000403433 PTH1RQ03431 593 aa21.56■■□□□ 1.04
CHTOP-205ENST00000403433 TFCP2Q12800 502 aa21.56■■□□□ 1.04
CHTOP-205ENST00000403433 KLHL40Q2TBA0 621 aa21.56■■□□□ 1.04
CHTOP-205ENST00000403433 DDX49Q9Y6V7 483 aaKnown RBP21.56■■□□□ 1.04
CHTOP-205ENST00000403433 NMIQ13287 307 aaPredicted RBP21.55■■□□□ 1.04
CHTOP-205ENST00000403433 MRE11P49959 708 aa21.55■■□□□ 1.04
CHTOP-205ENST00000403433 LMBR1LQ6UX01 489 aa21.55■■□□□ 1.04
CHTOP-205ENST00000403433 TTC14Q96N46 770 aa21.55■■□□□ 1.04
CHTOP-205ENST00000403433 ZBTB3Q9H5J0 574 aa21.55■■□□□ 1.04
CHTOP-205ENST00000403433 CHMP3Q9Y3E7 222 aa21.55■■□□□ 1.04
CHTOP-205ENST00000403433 COL14A1Q05707 1796 aaKnown RBP21.54■■□□□ 1.04
CHTOP-205ENST00000403433 FAM227BQ96M60 508 aa21.54■■□□□ 1.04
CHTOP-205ENST00000403433 ATP5JP18859 108 aa21.53■■□□□ 1.04
CHTOP-205ENST00000403433 CASTP20810 708 aaKnown RBP21.53■■□□□ 1.04
CHTOP-205ENST00000403433 FOXO4P98177 505 aa21.53■■□□□ 1.04
CHTOP-205ENST00000403433 PRPF40BQ6NWY9 871 aaKnown RBP21.53■■□□□ 1.04
CHTOP-205ENST00000403433 CCDC191Q8NCU4 936 aa21.53■■□□□ 1.04
CHTOP-205ENST00000403433 DBNLQ9UJU6 430 aaKnown RBP21.53■■□□□ 1.04
CHTOP-205ENST00000403433 XRCC6P12956 609 aaKnown RBP eCLIP21.53■■□□□ 1.04
CHTOP-205ENST00000403433 SNRKQ9NRH2 765 aa21.53■■□□□ 1.04
CHTOP-205ENST00000403433 BTG4Q9NY30 223 aa21.53■■□□□ 1.04
CHTOP-205ENST00000403433 BRD1O95696 1058 aa21.52■■□□□ 1.04
CHTOP-205ENST00000403433 KCNJ4P48050 445 aa21.52■■□□□ 1.04
CHTOP-205ENST00000403433 AK2P54819 239 aa21.52■■□□□ 1.04
CHTOP-205ENST00000403433 KCNB2Q92953 911 aa21.52■■□□□ 1.04
CHTOP-205ENST00000403433 LMBRD1Q9NUN5 540 aa21.52■■□□□ 1.04
CHTOP-205ENST00000403433 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
CHTOP-205ENST00000403433 JAKMIP1Q96N16 626 aaKnown RBP21.51■■□□□ 1.03
CHTOP-205ENST00000403433 LIMCH1Q9UPQ0 1083 aa21.51■■□□□ 1.03
CHTOP-205ENST00000403433 RBM8AQ9Y5S9 174 aaKnown RBP21.51■■□□□ 1.03
CHTOP-205ENST00000403433 ITGB4P16144 1822 aa21.51■■□□□ 1.03
CHTOP-205ENST00000403433 NECTIN1Q15223 517 aa21.51■■□□□ 1.03
CHTOP-205ENST00000403433 TM6SF1Q9BZW5 370 aa21.51■■□□□ 1.03
CHTOP-205ENST00000403433 GRPEL1Q9HAV7 217 aa21.51■■□□□ 1.03
CHTOP-205ENST00000403433 RFX7Q2KHR2 1363 aa21.5■■□□□ 1.03
CHTOP-205ENST00000403433 MED23Q9ULK4 1368 aa21.5■■□□□ 1.03
CHTOP-205ENST00000403433 A0A0D9SFI3 127 aa21.5■■□□□ 1.03
CHTOP-205ENST00000403433 FOXD4L5Q5VV16 416 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-205ENST00000403433 FOXD4L4Q8WXT5 416 aaPredicted RBP21.5■■□□□ 1.03
CHTOP-205ENST00000403433 PLCH1Q4KWH8 1693 aa21.5■■□□□ 1.03
CHTOP-205ENST00000403433 TEX13AQ9BXU3 409 aaPredicted RBP21.49■■□□□ 1.03
CHTOP-205ENST00000403433 CYP46A1Q9Y6A2 500 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 VPS53Q5VIR6 699 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 CREB3L3Q68CJ9 461 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 RUFY3Q7L099 469 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 MAP4K1Q92918 833 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 PDRG1Q9NUG6 133 aa21.49■■□□□ 1.03
CHTOP-205ENST00000403433 DBNDD2Q9BQY9 259 aa21.48■■□□□ 1.03
CHTOP-205ENST00000403433 ZSWIM6Q9HCJ5 1215 aa21.48■■□□□ 1.03
CHTOP-205ENST00000403433 ROBO1Q9Y6N7 1651 aa21.48■■□□□ 1.03
CHTOP-205ENST00000403433 PRPF40AO75400 957 aaKnown RBP21.47■■□□□ 1.03
CHTOP-205ENST00000403433 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 PIGBQ92521 554 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.47■■□□□ 1.03
CHTOP-205ENST00000403433 WDR33Q9C0J8 1336 aaKnown RBP21.47■■□□□ 1.03
CHTOP-205ENST00000403433 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 NCLP19338 710 aaKnown RBP21.47■■□□□ 1.03
CHTOP-205ENST00000403433 ADCK5Q3MIX3 580 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 KIF6Q6ZMV9 814 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 HAUS7Q99871 368 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 ASAP1Q9ULH1 1129 aa21.47■■□□□ 1.03
CHTOP-205ENST00000403433 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
CHTOP-205ENST00000403433 COL22A1Q8NFW1 1626 aaPredicted RBP21.46■■□□□ 1.03
CHTOP-205ENST00000403433 CPA1P15085 419 aa21.46■■□□□ 1.03
CHTOP-205ENST00000403433 IL15P40933 162 aaPredicted RBP21.46■■□□□ 1.03
CHTOP-205ENST00000403433 EDC3Q96F86 508 aaKnown RBP21.46■■□□□ 1.03
CHTOP-205ENST00000403433 DNAJC2Q99543 621 aaKnown RBP21.46■■□□□ 1.03
CHTOP-205ENST00000403433 ISCA1Q9BUE6 129 aa21.46■■□□□ 1.03
CHTOP-205ENST00000403433 JCADQ9P266 1359 aa21.46■■□□□ 1.03
CHTOP-205ENST00000403433 LRP6O75581 1613 aa21.46■■□□□ 1.03
CHTOP-205ENST00000403433 WNK3Q9BYP7 1800 aa21.46■■□□□ 1.03
CHTOP-205ENST00000403433 SLC27A2O14975 620 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 STARD3NLO95772 234 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 PSMA5P28066 241 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 DNAJC10Q8IXB1 793 aa21.45■■□□□ 1.02
CHTOP-205ENST00000403433 COL16A1Q07092 1604 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms