RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 RUFY3Q7L099 469 aa5.24□□□□□ -1.57
SMC6-203ENST00000402989 CEMIPQ8WUJ3 1361 aa5.24□□□□□ -1.57
SMC6-203ENST00000402989 RUFY2Q8WXA3 655 aa5.24□□□□□ -1.57
SMC6-203ENST00000402989 RAD50Q92878 1312 aa5.24□□□□□ -1.57
SMC6-203ENST00000402989 HYPKQ9NX55 129 aa5.24□□□□□ -1.57
SMC6-203ENST00000402989 KDM4AO75164 1064 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 IGKV5-2P06315 115 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 ZKSCAN1P17029 563 aaPredicted RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 GJB2P29033 226 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 MCM2P49736 904 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 TOM1L2Q6ZVM7 507 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 LINS1Q8NG48 757 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 DDX21Q9NR30 783 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMC6-203ENST00000402989 CYP46A1Q9Y6A2 500 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 ADGRL3Q9HAR2 1447 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 ERBB3P21860 1342 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 BRD1O95696 1058 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 CEBPZQ03701 1054 aaKnown RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 TFCP2Q12800 502 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 ANKRD13DQ6ZTN6 518 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 DDX11Q96FC9 970 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 SEC62Q99442 399 aaKnown RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 ALS2Q96Q42 1657 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 WDR33Q9C0J8 1336 aaKnown RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 SYT1P21579 422 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 DNM1Q05193 864 aaKnown RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 CCDC173Q0VFZ6 552 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 HSP90AB3PQ58FF7 597 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 LARP1Q6PKG0 1096 aaKnown RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 KAZALD1Q96I82 304 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 ZNF594Q96JF6 807 aaPredicted RBP5.23□□□□□ -1.57
SMC6-203ENST00000402989 SLC52A2Q9HAB3 445 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 PRDM11Q9NQV5 511 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 LIMCH1Q9UPQ0 1083 aa5.23□□□□□ -1.57
SMC6-203ENST00000402989 NPHP4O75161 1426 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 NPHP3Q7Z494 1330 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 TCHHQ07283 1943 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 NEURL1BA8MQ27 555 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 STX6O43752 255 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 A1BGP04217 495 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 LMBR1LQ6UX01 489 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 ZNF589Q86UQ0 364 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 ZNF830Q96NB3 372 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 DBNDD2Q9BQY9 259 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 SNRKQ9NRH2 765 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 TFIP11Q9UBB9 837 aaKnown RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 CICQ96RK0 1608 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 FAM177BA6PVY3 158 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 NPM3O75607 178 aaKnown RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 ALDH1L1O75891 902 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 PHKG2P15735 406 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 ANAPC15P60006 121 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 GCKRQ14397 625 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 CAMK4Q16566 473 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 CREB3L3Q68CJ9 461 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 RAB11FIP4Q86YS3 637 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 ERC1Q8IUD2 1116 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 IFNL2Q8IZJ0 200 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 FBXW7Q969H0 707 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 SYTL4Q96C24 671 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 TSPY26PQ9H489 355 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 CCDC171Q6TFL3 1326 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 CYP27B1O15528 508 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 HCLS1P14317 486 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 TIMM10P62072 90 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 GIMAP6Q6P9H5 292 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 TTLL7Q6ZT98 887 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 CHST3Q7LGC8 479 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 EVI5LQ96CN4 794 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 C19orf44Q9H6X5 657 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 BABAM1Q9NWV8 329 aa5.22□□□□□ -1.57
SMC6-203ENST00000402989 COL22A1Q8NFW1 1626 aaPredicted RBP5.22□□□□□ -1.57
SMC6-203ENST00000402989 MBD3O95983 291 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 ZSCAN22P10073 491 aaPredicted RBP5.21□□□□□ -1.57
SMC6-203ENST00000402989 CLCN1P35523 988 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 CUL4AQ13619 759 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 PDIA6Q15084 440 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 ME3Q16798 604 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 DNTTIP2Q5QJE6 756 aaKnown RBP5.21□□□□□ -1.57
SMC6-203ENST00000402989 LARP1BQ659C4 914 aaKnown RBP5.21□□□□□ -1.57
SMC6-203ENST00000402989 BLOC1S2Q6QNY1 142 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 LRSAM1Q6UWE0 723 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 CHMP4AQ9BY43 222 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 USP25Q9UHP3 1055 aa5.21□□□□□ -1.57
SMC6-203ENST00000402989 R3HCC1Q9Y3T6 440 aaKnown RBP5.21□□□□□ -1.57
SMC6-203ENST00000402989 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.21□□□□□ -1.57
SMC6-203ENST00000402989 TMEM94Q12767 1356 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 NFAT5O94916 1531 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 GOLIM4O00461 696 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 HOXB7P09629 217 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 SNRPA1P09661 255 aaKnown RBP5.21□□□□□ -1.58
SMC6-203ENST00000402989 EVA1CP58658 441 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 GUCY1B3Q02153 619 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 GORABQ5T7V8 394 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 SYAP1Q96A49 352 aaPredicted RBP5.21□□□□□ -1.58
SMC6-203ENST00000402989 FMNL2Q96PY5 1086 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 BCL11BQ9C0K0 894 aaPredicted RBP5.21□□□□□ -1.58
SMC6-203ENST00000402989 NHSL1Q5SYE7 1610 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 TTC41PQ6P2S7 1318 aa5.21□□□□□ -1.58
SMC6-203ENST00000402989 GOLGA6L4A6NEF3 574 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms