RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 SSH3Q8TE77 659 aa24.25■■□□□ 1.47
AC008060.1-201ENST00000401499 GCC1Q96CN9 775 aa24.25■■□□□ 1.47
AC008060.1-201ENST00000401499 HDAC5Q9UQL6 1122 aa24.25■■□□□ 1.47
AC008060.1-201ENST00000401499 TUBGCP6Q96RT7 1819 aa24.25■■□□□ 1.47
AC008060.1-201ENST00000401499 POLA2Q14181 598 aa24.25■■□□□ 1.47
AC008060.1-201ENST00000401499 RTL5Q5HYW3 569 aaPredicted RBP24.24■■□□□ 1.47
AC008060.1-201ENST00000401499 ARHGEF1Q92888 912 aaKnown RBP24.24■■□□□ 1.47
AC008060.1-201ENST00000401499 BCL2L12Q9HB09 334 aa24.24■■□□□ 1.47
AC008060.1-201ENST00000401499 NARFQ9UHQ1 456 aa24.24■■□□□ 1.47
AC008060.1-201ENST00000401499 SRP68Q9UHB9 627 aaKnown RBP24.23■■□□□ 1.47
AC008060.1-201ENST00000401499 SRGAP3O43295 1099 aa24.22■■□□□ 1.47
AC008060.1-201ENST00000401499 PHF14O94880 888 aa24.22■■□□□ 1.47
AC008060.1-201ENST00000401499 PCCAP05165 728 aaPredicted RBP24.22■■□□□ 1.47
AC008060.1-201ENST00000401499 USPL1Q5W0Q7 1092 aa24.22■■□□□ 1.47
AC008060.1-201ENST00000401499 RGL2O15211 777 aa24.21■■□□□ 1.47
AC008060.1-201ENST00000401499 CLEC4GQ6UXB4 293 aa24.21■■□□□ 1.47
AC008060.1-201ENST00000401499 ZBTB38Q8NAP3 1195 aaPredicted RBP24.21■■□□□ 1.47
AC008060.1-201ENST00000401499 ZNF652Q9Y2D9 606 aa24.21■■□□□ 1.47
AC008060.1-201ENST00000401499 COL24A1Q17RW2 1714 aa24.21■■□□□ 1.47
AC008060.1-201ENST00000401499 NUCB1Q02818 461 aa24.2■■□□□ 1.47
AC008060.1-201ENST00000401499 RABL6Q3YEC7 729 aaPredicted RBP24.2■■□□□ 1.47
AC008060.1-201ENST00000401499 FAM89AQ96GI7 184 aa24.2■■□□□ 1.47
AC008060.1-201ENST00000401499 FOXO4P98177 505 aa24.2■■□□□ 1.46
AC008060.1-201ENST00000401499 ZNF827Q17R98 1081 aa24.2■■□□□ 1.46
AC008060.1-201ENST00000401499 TRAPPC3LQ5T215 181 aa24.2■■□□□ 1.46
AC008060.1-201ENST00000401499 USP42Q9H9J4 1324 aaKnown RBP24.2■■□□□ 1.46
AC008060.1-201ENST00000401499 MYH3P11055 1940 aa24.19■■□□□ 1.46
AC008060.1-201ENST00000401499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.19■■□□□ 1.46
AC008060.1-201ENST00000401499 ADRA2BP18089 450 aa24.19■■□□□ 1.46
AC008060.1-201ENST00000401499 SUSD4Q5VX71 490 aa24.19■■□□□ 1.46
AC008060.1-201ENST00000401499 SYNE4Q8N205 404 aa24.19■■□□□ 1.46
AC008060.1-201ENST00000401499 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
AC008060.1-201ENST00000401499 LAMB2P55268 1798 aa24.18■■□□□ 1.46
AC008060.1-201ENST00000401499 AKT1S1Q96B36 256 aa24.18■■□□□ 1.46
AC008060.1-201ENST00000401499 CAMKK2Q96RR4 588 aa24.18■■□□□ 1.46
AC008060.1-201ENST00000401499 EXOC6BQ9Y2D4 811 aa24.18■■□□□ 1.46
AC008060.1-201ENST00000401499 CDHR2Q9BYE9 1310 aa24.18■■□□□ 1.46
AC008060.1-201ENST00000401499 DDX60Q8IY21 1712 aaKnown RBP24.18■■□□□ 1.46
AC008060.1-201ENST00000401499 ZPR1O75312 459 aa24.17■■□□□ 1.46
AC008060.1-201ENST00000401499 SSFA2P28290 1259 aa24.17■■□□□ 1.46
AC008060.1-201ENST00000401499 PARP10Q53GL7 1025 aa24.17■■□□□ 1.46
AC008060.1-201ENST00000401499 ANKRD45Q5TZF3 282 aa24.17■■□□□ 1.46
AC008060.1-201ENST00000401499 TRMT112Q9UI30 125 aaKnown RBP24.17■■□□□ 1.46
AC008060.1-201ENST00000401499 HMGB2P26583 209 aaKnown RBP24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 PDE4AP27815 886 aa24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 RFC4P35249 363 aa24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 RGS3P49796 1198 aa24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 EN1Q05925 392 aaPredicted RBP24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 EZH2Q15910 746 aaKnown RBP24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 TBC1D9BQ66K14 1250 aa24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 CHD1LQ86WJ1 897 aa24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 LNPKQ9C0E8 428 aa24.16■■□□□ 1.46
AC008060.1-201ENST00000401499 NTSR2O95665 410 aa24.15■■□□□ 1.46
AC008060.1-201ENST00000401499 LMBR1LQ6UX01 489 aa24.15■■□□□ 1.46
AC008060.1-201ENST00000401499 PLA2G12BQ9BX93 195 aa24.15■■□□□ 1.46
AC008060.1-201ENST00000401499 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
AC008060.1-201ENST00000401499 FAM177BA6PVY3 158 aa24.13■■□□□ 1.45
AC008060.1-201ENST00000401499 APBB1O00213 710 aa24.13■■□□□ 1.45
AC008060.1-201ENST00000401499 RFX5P48382 616 aaPredicted RBP24.13■■□□□ 1.45
AC008060.1-201ENST00000401499 UTP14AQ9BVJ6 771 aaKnown RBP24.13■■□□□ 1.45
AC008060.1-201ENST00000401499 PA2G4Q9UQ80 394 aaKnown RBP24.13■■□□□ 1.45
AC008060.1-201ENST00000401499 CASZ1Q86V15 1759 aa24.13■■□□□ 1.45
AC008060.1-201ENST00000401499 SURF6O75683 361 aaKnown RBP24.12■■□□□ 1.45
AC008060.1-201ENST00000401499 NOP58Q9Y2X3 529 aaKnown RBP24.12■■□□□ 1.45
AC008060.1-201ENST00000401499 IRS4O14654 1257 aaPredicted RBP24.12■■□□□ 1.45
AC008060.1-201ENST00000401499 SMARCA5O60264 1052 aaPredicted RBP24.12■■□□□ 1.45
AC008060.1-201ENST00000401499 BICDL1Q6ZP65 573 aa24.12■■□□□ 1.45
AC008060.1-201ENST00000401499 SH3TC1Q8TE82 1336 aa24.11■■□□□ 1.45
AC008060.1-201ENST00000401499 KLHDC4Q8TBB5 520 aa24.11■■□□□ 1.45
AC008060.1-201ENST00000401499 DEFB132Q7Z7B7 95 aa24.1■■□□□ 1.45
AC008060.1-201ENST00000401499 TFCP2L1Q9NZI6 479 aa24.1■■□□□ 1.45
AC008060.1-201ENST00000401499 CSF1RP07333 972 aa24.09■■□□□ 1.45
AC008060.1-201ENST00000401499 GYS1P13807 737 aa24.09■■□□□ 1.45
AC008060.1-201ENST00000401499 SF3B2Q13435 895 aaKnown RBP24.09■■□□□ 1.45
AC008060.1-201ENST00000401499 QSER1Q2KHR3 1735 aa24.09■■□□□ 1.45
AC008060.1-201ENST00000401499 BAG6P46379 1132 aa24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 PTPN12Q05209 780 aaKnown RBP24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 NUTM1Q86Y26 1132 aa24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 LRRCC1Q9C099 1032 aa24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 ANO8Q9HCE9 1232 aaPredicted RBP24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 COPRSQ9NQ92 184 aa24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 CHMP3Q9Y3E7 222 aa24.08■■□□□ 1.45
AC008060.1-201ENST00000401499 PDE8AO60658 829 aa24.08■■□□□ 1.44
AC008060.1-201ENST00000401499 RAB11FIP3O75154 756 aa24.08■■□□□ 1.44
AC008060.1-201ENST00000401499 CTSWP56202 376 aa24.08■■□□□ 1.44
AC008060.1-201ENST00000401499 SETDB2Q96T68 719 aa24.08■■□□□ 1.44
AC008060.1-201ENST00000401499 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
AC008060.1-201ENST00000401499 FAM161AQ3B820 660 aa24.07■■□□□ 1.44
AC008060.1-201ENST00000401499 COL23A1Q86Y22 540 aaPredicted RBP24.07■■□□□ 1.44
AC008060.1-201ENST00000401499 TTLL11Q8NHH1 800 aa24.07■■□□□ 1.44
AC008060.1-201ENST00000401499 PNPLA7Q6ZV29 1317 aa24.06■■□□□ 1.44
AC008060.1-201ENST00000401499 NFIXQ14938 502 aa24.06■■□□□ 1.44
AC008060.1-201ENST00000401499 C16orf71Q8IYS4 520 aaPredicted RBP24.06■■□□□ 1.44
AC008060.1-201ENST00000401499 ERFEQ4G0M1 354 aa24.05■■□□□ 1.44
AC008060.1-201ENST00000401499 HSP90AB4PQ58FF6 505 aa24.05■■□□□ 1.44
AC008060.1-201ENST00000401499 RHPN1Q8TCX5 695 aa24.05■■□□□ 1.44
AC008060.1-201ENST00000401499 CCDC85AQ96PX6 553 aaPredicted RBP24.05■■□□□ 1.44
AC008060.1-201ENST00000401499 SIL1Q9H173 461 aa24.05■■□□□ 1.44
AC008060.1-201ENST00000401499 ABCC12Q96J65 1359 aa24.05■■□□□ 1.44
AC008060.1-201ENST00000401499 CARMIL3Q8ND23 1372 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms