RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CLSTN2Q9H4D0 955 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CTTNBP2Q8WZ74 1663 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
PTPRM-203ENST00000400060 NSRP1Q9H0G5 558 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 URB2Q14146 1524 aaKnown RBP11.49□□□□□ -0.57
PTPRM-203ENST00000400060 LUC7L3O95232 432 aaKnown RBP11.48□□□□□ -0.57
PTPRM-203ENST00000400060 SLFN14P0C7P3 912 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 SSH2Q76I76 1423 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 SYT1P21579 422 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 RABGGTAQ92696 567 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 SLMAPQ14BN4 828 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 CXorf56Q9H5V9 222 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 CLASP1Q7Z460 1538 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
PTPRM-203ENST00000400060 GCKP35557 465 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
PTPRM-203ENST00000400060 ANKS4BQ8N8V4 417 aa11.48□□□□□ -0.57
PTPRM-203ENST00000400060 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 ZBTB40Q9NUA8 1239 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 MAGEC2Q9UBF1 373 aaPredicted RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 PYCARDQ9ULZ3 195 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 ZGPATQ8N5A5 531 aaKnown RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 DONSONQ9NYP3 566 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 KDM5CP41229 1560 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 TADA2BQ86TJ2 420 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 SUFUQ9UMX1 484 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 GRIN2AQ12879 1464 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 SCAF11Q99590 1463 aaKnown RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 UBTFL1P0CB47 393 aaPredicted RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 ENOX2Q16206 610 aaKnown RBP11.47□□□□□ -0.57
PTPRM-203ENST00000400060 SRLQ86TD4 932 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 DNAJC25Q9H1X3 360 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 KIF24Q5T7B8 1368 aa11.47□□□□□ -0.57
PTPRM-203ENST00000400060 CHMP4BP1P59074 171 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 LMNTD2Q8IXW0 634 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 DHX37Q8IY37 1157 aaKnown RBP11.46□□□□□ -0.57
PTPRM-203ENST00000400060 CLASRPQ8N2M8 674 aaKnown RBP11.46□□□□□ -0.57
PTPRM-203ENST00000400060 TMEM87AQ8NBN3 555 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
PTPRM-203ENST00000400060 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 PNMA6AP0CW24 399 aaPredicted RBP11.46□□□□□ -0.57
PTPRM-203ENST00000400060 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 SH3GL3Q99963 347 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTPRM-203ENST00000400060 DACT1Q9NYF0 836 aa11.46□□□□□ -0.57
PTPRM-203ENST00000400060 PPFIA4O75335 1185 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 PPFIA1Q13136 1202 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 CEP85LQ5SZL2 805 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 ESYT1Q9BSJ8 1104 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 SLC3A2P08195 630 aaKnown RBP11.46□□□□□ -0.58
PTPRM-203ENST00000400060 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.58
PTPRM-203ENST00000400060 PAFAH1B1P43034 410 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 RASSF8Q8NHQ8 419 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 GGNBP2Q9H3C7 697 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 UHRF1BP1LA0JNW5 1464 aa11.46□□□□□ -0.58
PTPRM-203ENST00000400060 FCHSD2O94868 740 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 LRRC8AQ8IWT6 810 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 TDRD7Q8NHU6 1098 aaKnown RBP11.45□□□□□ -0.58
PTPRM-203ENST00000400060 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 PTPRCP08575 1304 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 SDSP20132 328 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 PLB1Q6P1J6 1458 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 RPGRIP1LQ68CZ1 1315 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 FBXO38Q6PIJ6 1188 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 CTAGE1Q96RT6 745 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 GOLGA8KD6RF30 607 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
PTPRM-203ENST00000400060 NAP1L1P55209 391 aaKnown RBP11.45□□□□□ -0.58
PTPRM-203ENST00000400060 RNF168Q8IYW5 571 aaPredicted RBP11.45□□□□□ -0.58
PTPRM-203ENST00000400060 FSIP1Q8NA03 581 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 CARD6Q9BX69 1037 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
PTPRM-203ENST00000400060 YEATS4O95619 227 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 UBASH3AP57075 661 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 NUCKS1Q9H1E3 243 aaKnown RBP11.44□□□□□ -0.58
PTPRM-203ENST00000400060 GOLGA6CA6NDK9 693 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 ARHGAP6O43182 974 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 GOLGA6DP0CG33 693 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 MAP2K1Q02750 393 aaPredicted RBP11.44□□□□□ -0.58
PTPRM-203ENST00000400060 SNCBQ16143 134 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 ERCC6LQ2NKX8 1250 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 SH2D4BQ5SQS7 431 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 GOLGA6AQ9NYA3 693 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 RAI14Q9P0K7 980 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 CLCN6P51797 869 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 ZNF710Q8N1W2 664 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 CCDC151A5D8V7 595 aa11.44□□□□□ -0.58
PTPRM-203ENST00000400060 RPUSD2Q8IZ73 545 aaKnown RBP11.44□□□□□ -0.58
PTPRM-203ENST00000400060 NDUFAB1O14561 156 aa11.43□□□□□ -0.58
PTPRM-203ENST00000400060 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.58
PTPRM-203ENST00000400060 HMG20BQ9P0W2 317 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms