RNA–Protein interactions for RNA: ENST00000399395.7

SDR39U1-201, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR39U1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-201ENST00000399395 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
SDR39U1-201ENST00000399395 EPHX2P34913 555 aa23.17■■□□□ 1.3
SDR39U1-201ENST00000399395 PARP10Q53GL7 1025 aa23.17■■□□□ 1.3
SDR39U1-201ENST00000399395 SUSD4Q5VX71 490 aa23.17■■□□□ 1.3
SDR39U1-201ENST00000399395 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
SDR39U1-201ENST00000399395 RBM17Q96I25 401 aaKnown RBP23.17■■□□□ 1.3
SDR39U1-201ENST00000399395 SNED1Q8TER0 1413 aa23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 FZD9O00144 591 aa23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 NTSR2O95665 410 aa23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 HOXA10P31260 410 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 EIF6P56537 245 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 RIPK4P57078 832 aa23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 GRIPAP1Q4V328 841 aa23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 ZNF34Q8IZ26 560 aa23.16■■□□□ 1.3
SDR39U1-201ENST00000399395 PASKQ96RG2 1323 aa23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 PPEF1O14829 653 aaPredicted RBP23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 RALBP1Q15311 655 aa23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 PNMA8AQ86V59 439 aaPredicted RBP23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 GPC2Q8N158 579 aa23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 TMX4Q9H1E5 349 aaPredicted RBP23.15■■□□□ 1.3
SDR39U1-201ENST00000399395 CNTNAP1P78357 1384 aa23.14■■□□□ 1.3
SDR39U1-201ENST00000399395 CRAMP1Q96RY5 1269 aa23.14■■□□□ 1.29
SDR39U1-201ENST00000399395 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
SDR39U1-201ENST00000399395 LARGE2Q8N3Y3 721 aa23.13■■□□□ 1.29
SDR39U1-201ENST00000399395 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
SDR39U1-201ENST00000399395 GJA3Q9Y6H8 435 aa23.13■■□□□ 1.29
SDR39U1-201ENST00000399395 ADAMTSL1Q8N6G6 1762 aa23.13■■□□□ 1.29
SDR39U1-201ENST00000399395 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
SDR39U1-201ENST00000399395 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
SDR39U1-201ENST00000399395 CAPN15O75808 1086 aa23.12■■□□□ 1.29
SDR39U1-201ENST00000399395 NLRP3Q96P20 1036 aa23.12■■□□□ 1.29
SDR39U1-201ENST00000399395 PCNTO95613 3336 aa23.12■■□□□ 1.29
SDR39U1-201ENST00000399395 ZEB1P37275 1124 aaPredicted RBP23.11■■□□□ 1.29
SDR39U1-201ENST00000399395 UTP14AQ9BVJ6 771 aaKnown RBP23.11■■□□□ 1.29
SDR39U1-201ENST00000399395 ANKRD36CQ5JPF3 1778 aa23.1■■□□□ 1.29
SDR39U1-201ENST00000399395 TMPOP42166 694 aaKnown RBP23.1■■□□□ 1.29
SDR39U1-201ENST00000399395 NIM1KQ8IY84 436 aa23.1■■□□□ 1.29
SDR39U1-201ENST00000399395 COL4A5P29400 1685 aa23.09■■□□□ 1.29
SDR39U1-201ENST00000399395 ITGBL1O95965 494 aaPredicted RBP23.09■■□□□ 1.29
SDR39U1-201ENST00000399395 ANXA1P04083 346 aa23.09■■□□□ 1.29
SDR39U1-201ENST00000399395 PDIA6Q15084 440 aa23.09■■□□□ 1.29
SDR39U1-201ENST00000399395 HSP90AB3PQ58FF7 597 aa23.09■■□□□ 1.29
SDR39U1-201ENST00000399395 PROSER3Q2NL68 480 aa23.08■■□□□ 1.29
SDR39U1-201ENST00000399395 MAP1SQ66K74 1059 aaPredicted RBP23.08■■□□□ 1.29
SDR39U1-201ENST00000399395 C3orf67Q6ZVT6 689 aa23.08■■□□□ 1.29
SDR39U1-201ENST00000399395 LRP10Q7Z4F1 713 aa23.08■■□□□ 1.29
SDR39U1-201ENST00000399395 CNTROBQ8N137 903 aa23.08■■□□□ 1.29
SDR39U1-201ENST00000399395 NECTIN2Q92692 538 aa23.08■■□□□ 1.29
SDR39U1-201ENST00000399395 MYBBP1AQ9BQG0 1328 aaKnown RBP23.08■■□□□ 1.28
SDR39U1-201ENST00000399395 PPIP5K2O43314 1243 aa23.07■■□□□ 1.28
SDR39U1-201ENST00000399395 AIMP1Q12904 312 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-201ENST00000399395 AIDAQ96BJ3 306 aa23.07■■□□□ 1.28
SDR39U1-201ENST00000399395 NEUROD2Q15784 382 aa23.06■■□□□ 1.28
SDR39U1-201ENST00000399395 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 COPS6Q7L5N1 327 aa23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 SUPT20HQ8NEM7 779 aa23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 XAGE3Q8WTP9 111 aa23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 ATP6V0A2Q9Y487 856 aa23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 ABCC4O15439 1325 aa23.05■■□□□ 1.28
SDR39U1-201ENST00000399395 VEGFBP49765 207 aa23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 AOC3Q16853 763 aa23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 SLC10A5Q5PT55 438 aa23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 SLC51AQ86UW1 340 aa23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 LTBP1Q14766 1721 aa23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 LAMB2P55268 1798 aa23.04■■□□□ 1.28
SDR39U1-201ENST00000399395 SCNN1DP51172 638 aa23.03■■□□□ 1.28
SDR39U1-201ENST00000399395 NLRP10Q86W26 655 aa23.03■■□□□ 1.28
SDR39U1-201ENST00000399395 VPS33BQ9H267 617 aa23.03■■□□□ 1.28
SDR39U1-201ENST00000399395 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
SDR39U1-201ENST00000399395 ABT1Q9ULW3 272 aaKnown RBP23.03■■□□□ 1.28
SDR39U1-201ENST00000399395 FOXN1O15353 648 aa23.02■■□□□ 1.28
SDR39U1-201ENST00000399395 TRMT112Q9UI30 125 aaKnown RBP23.02■■□□□ 1.28
SDR39U1-201ENST00000399395 SH3TC1Q8TE82 1336 aa23.02■■□□□ 1.28
SDR39U1-201ENST00000399395 HCLS1P14317 486 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-201ENST00000399395 EPS15P42566 896 aa23.01■■□□□ 1.27
SDR39U1-201ENST00000399395 DPP8Q6V1X1 898 aaPredicted RBP23.01■■□□□ 1.27
SDR39U1-201ENST00000399395 DDX46Q7L014 1031 aaKnown RBP23.01■■□□□ 1.27
SDR39U1-201ENST00000399395 RUNDC1Q96C34 613 aa23.01■■□□□ 1.27
SDR39U1-201ENST00000399395 RASSF10A6NK89 507 aa23■■□□□ 1.27
SDR39U1-201ENST00000399395 BBOX1O75936 387 aa23■■□□□ 1.27
SDR39U1-201ENST00000399395 DDX10Q13206 875 aaKnown RBP23■■□□□ 1.27
SDR39U1-201ENST00000399395 TCIRG1Q13488 830 aa23■■□□□ 1.27
SDR39U1-201ENST00000399395 DEFB115Q30KQ5 88 aa23■■□□□ 1.27
SDR39U1-201ENST00000399395 USP50Q70EL3 339 aaPredicted RBP23■■□□□ 1.27
SDR39U1-201ENST00000399395 CHL1O00533 1208 aa22.99■■□□□ 1.27
SDR39U1-201ENST00000399395 CTCFP49711 727 aaPredicted RBP22.99■■□□□ 1.27
SDR39U1-201ENST00000399395 KRT24Q2M2I5 525 aa22.99■■□□□ 1.27
SDR39U1-201ENST00000399395 HDGFL1Q5TGJ6 251 aa22.99■■□□□ 1.27
SDR39U1-201ENST00000399395 MPNDQ8N594 471 aa22.99■■□□□ 1.27
SDR39U1-201ENST00000399395 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
SDR39U1-201ENST00000399395 GRAPQ13588 217 aa22.98■■□□□ 1.27
SDR39U1-201ENST00000399395 SP8Q8IXZ3 490 aa22.98■■□□□ 1.27
SDR39U1-201ENST00000399395 GRAPLQ8TC17 118 aaPredicted RBP22.98■■□□□ 1.27
SDR39U1-201ENST00000399395 ZNRF3Q9ULT6 936 aa22.98■■□□□ 1.27
SDR39U1-201ENST00000399395 HOXB7P09629 217 aa22.97■■□□□ 1.27
SDR39U1-201ENST00000399395 PAXIP1Q6ZW49 1069 aaPredicted RBP22.97■■□□□ 1.27
SDR39U1-201ENST00000399395 RTFDC1Q9BY42 306 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms