RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
SMIM11A-201ENST00000399292 SCN11AQ9UI33 1791 aa15.63■□□□□ 0.09
SMIM11A-201ENST00000399292 GPR162Q16538 588 aa15.63■□□□□ 0.09
SMIM11A-201ENST00000399292 CFAP44Q96MT7 982 aa15.63■□□□□ 0.09
SMIM11A-201ENST00000399292 CD2APQ9Y5K6 639 aa15.63■□□□□ 0.09
SMIM11A-201ENST00000399292 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
SMIM11A-201ENST00000399292 PDIA6Q15084 440 aa15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 INTS5Q6P9B9 1019 aaKnown RBP15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 ZNF790Q6PG37 636 aa15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 NLGN2Q8NFZ4 835 aa15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 DDX12PQ92771 950 aa15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 PNNQ9H307 717 aaKnown RBP15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 MRC1P22897 1456 aa15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 COL24A1Q17RW2 1714 aa15.62■□□□□ 0.09
SMIM11A-201ENST00000399292 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
SMIM11A-201ENST00000399292 CYP19A1P11511 503 aaPredicted RBP15.61■□□□□ 0.09
SMIM11A-201ENST00000399292 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
SMIM11A-201ENST00000399292 UBR3Q6ZT12 1888 aa15.61■□□□□ 0.09
SMIM11A-201ENST00000399292 BTBD11A6QL63 1104 aa15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 STARD3NLO95772 234 aa15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 MMP10P09238 476 aa15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 GYS1P13807 737 aa15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 MCM10Q7L590 875 aa15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 ZNF496Q96IT1 587 aaPredicted RBP15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 TEX13AQ9BXU3 409 aaPredicted RBP15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 CEMIPQ8WUJ3 1361 aa15.6■□□□□ 0.09
SMIM11A-201ENST00000399292 ADAMTS7Q9UKP4 1686 aa15.59■□□□□ 0.09
SMIM11A-201ENST00000399292 SPDYE16A6NNV3 312 aaPredicted RBP15.58■□□□□ 0.08
SMIM11A-201ENST00000399292 DCTN1Q14203 1278 aa15.58■□□□□ 0.08
SMIM11A-201ENST00000399292 FMNL2Q96PY5 1086 aa15.58■□□□□ 0.08
SMIM11A-201ENST00000399292 PLEKHF1Q96S99 279 aa15.58■□□□□ 0.08
SMIM11A-201ENST00000399292 ZPR1O75312 459 aa15.57■□□□□ 0.08
SMIM11A-201ENST00000399292 E2F4Q16254 413 aa15.57■□□□□ 0.08
SMIM11A-201ENST00000399292 LAPTM4BQ86VI4 370 aa15.57■□□□□ 0.08
SMIM11A-201ENST00000399292 MYBBP1AQ9BQG0 1328 aaKnown RBP15.57■□□□□ 0.08
SMIM11A-201ENST00000399292 KCPQ6ZWJ8 1503 aa15.57■□□□□ 0.08
SMIM11A-201ENST00000399292 KCNQ3O43525 872 aa15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 KIAA1468Q9P260 1216 aa15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 SRP68Q9UHB9 627 aaKnown RBP15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 ZBTB1Q9Y2K1 713 aa15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 PARP3Q9Y6F1 533 aa15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 SOS1Q07889 1333 aaPredicted RBP15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 HEG1Q9ULI3 1381 aa15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 COL5A3P25940 1745 aaPredicted RBP15.56■□□□□ 0.08
SMIM11A-201ENST00000399292 USP42Q9H9J4 1324 aaKnown RBP15.55■□□□□ 0.08
SMIM11A-201ENST00000399292 GRIN3BO60391 1043 aa15.55■□□□□ 0.08
SMIM11A-201ENST00000399292 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
SMIM11A-201ENST00000399292 NFE2L2Q16236 605 aa15.55■□□□□ 0.08
SMIM11A-201ENST00000399292 USPL1Q5W0Q7 1092 aa15.54■□□□□ 0.08
SMIM11A-201ENST00000399292 ANKK1Q8NFD2 765 aa15.54■□□□□ 0.08
SMIM11A-201ENST00000399292 WDR70Q9NW82 654 aa15.54■□□□□ 0.08
SMIM11A-201ENST00000399292 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
SMIM11A-201ENST00000399292 ARIH1Q9Y4X5 557 aaPredicted RBP15.54■□□□□ 0.08
SMIM11A-201ENST00000399292 TJP1Q07157 1748 aa15.54■□□□□ 0.08
SMIM11A-201ENST00000399292 MYH14Q7Z406 1995 aaKnown RBP15.53■□□□□ 0.08
SMIM11A-201ENST00000399292 NBR1Q14596 966 aa15.53■□□□□ 0.08
SMIM11A-201ENST00000399292 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
SMIM11A-201ENST00000399292 A0A087WZG4 1122 aa15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 TRIM6-TRIM34B2RNG4 842 aa15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 YBX3P16989 372 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 TM4SF1P30408 202 aa15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 EIF5P55010 431 aaKnown RBP15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 TGFB2P61812 414 aa15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 IFFO2Q5TF58 517 aa15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 NPM2Q86SE8 214 aaKnown RBP15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 PNISRQ8TF01 805 aaKnown RBP15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 CICQ96RK0 1608 aaPredicted RBP15.52■□□□□ 0.08
SMIM11A-201ENST00000399292 COL15A1P39059 1388 aa15.51■□□□□ 0.07
SMIM11A-201ENST00000399292 A1BGP04217 495 aa15.51■□□□□ 0.07
SMIM11A-201ENST00000399292 IL6STP40189 918 aaPredicted RBP15.51■□□□□ 0.07
SMIM11A-201ENST00000399292 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
SMIM11A-201ENST00000399292 RIPK4P57078 832 aa15.5■□□□□ 0.07
SMIM11A-201ENST00000399292 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMIM11A-201ENST00000399292 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
SMIM11A-201ENST00000399292 USP16Q9Y5T5 823 aa15.5■□□□□ 0.07
SMIM11A-201ENST00000399292 VIRMAQ69YN4 1812 aaKnown RBP15.5■□□□□ 0.07
SMIM11A-201ENST00000399292 MAP3K7O43318 606 aa15.49■□□□□ 0.07
SMIM11A-201ENST00000399292 DDR1Q08345 913 aa15.49■□□□□ 0.07
SMIM11A-201ENST00000399292 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
SMIM11A-201ENST00000399292 A0A0G2JLW4 131 aa15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 PRAMEF22A3QJZ6 481 aa15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 POLRMTO00411 1230 aaKnown RBP15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 WWC3Q9ULE0 1092 aa15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 TBC1D2BQ9UPU7 963 aa15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 UBR2Q8IWV8 1755 aa15.48■□□□□ 0.07
SMIM11A-201ENST00000399292 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
SMIM11A-201ENST00000399292 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-201ENST00000399292 NFIXQ14938 502 aa15.47■□□□□ 0.07
SMIM11A-201ENST00000399292 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
SMIM11A-201ENST00000399292 RUNDC1Q96C34 613 aa15.47■□□□□ 0.07
SMIM11A-201ENST00000399292 SEPT9Q9UHD8 586 aaPredicted RBP15.47■□□□□ 0.07
SMIM11A-201ENST00000399292 SOWAHBA6NEL2 793 aa15.46■□□□□ 0.07
SMIM11A-201ENST00000399292 DPEP1P16444 411 aa15.46■□□□□ 0.07
SMIM11A-201ENST00000399292 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
SMIM11A-201ENST00000399292 NEUROD2Q15784 382 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms