RNA–Protein interactions for RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 TRIM28Q13263 835 aaKnown RBP23.27■■□□□ 1.32
TTC3-203ENST00000399010 NLGN1Q8N2Q7 840 aa23.27■■□□□ 1.32
TTC3-203ENST00000399010 JARID2Q92833 1246 aaPredicted RBP23.27■■□□□ 1.32
TTC3-203ENST00000399010 NEFLP07196 543 aa23.27■■□□□ 1.32
TTC3-203ENST00000399010 RTL5Q5HYW3 569 aaPredicted RBP23.27■■□□□ 1.32
TTC3-203ENST00000399010 SUSD4Q5VX71 490 aa23.27■■□□□ 1.32
TTC3-203ENST00000399010 C9orf78Q9NZ63 289 aaPredicted RBP23.27■■□□□ 1.32
TTC3-203ENST00000399010 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
TTC3-203ENST00000399010 MEIS3Q99687 375 aa23.26■■□□□ 1.31
TTC3-203ENST00000399010 DDX19BQ9UMR2 479 aa23.26■■□□□ 1.31
TTC3-203ENST00000399010 CARMIL3Q8ND23 1372 aa23.26■■□□□ 1.31
TTC3-203ENST00000399010 ZBTB7AO95365 584 aa23.25■■□□□ 1.31
TTC3-203ENST00000399010 USP44Q9H0E7 712 aa23.25■■□□□ 1.31
TTC3-203ENST00000399010 GRM8O00222 908 aa23.24■■□□□ 1.31
TTC3-203ENST00000399010 TM4SF1P30408 202 aa23.24■■□□□ 1.31
TTC3-203ENST00000399010 DDR1Q08345 913 aa23.24■■□□□ 1.31
TTC3-203ENST00000399010 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
TTC3-203ENST00000399010 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
TTC3-203ENST00000399010 NBPF7P0C2Y1 421 aaPredicted RBP23.24■■□□□ 1.31
TTC3-203ENST00000399010 UBE3BQ7Z3V4 1068 aa23.24■■□□□ 1.31
TTC3-203ENST00000399010 SLC16A10Q8TF71 515 aa23.24■■□□□ 1.31
TTC3-203ENST00000399010 ZBTB7BO15156 539 aaPredicted RBP23.23■■□□□ 1.31
TTC3-203ENST00000399010 MMP10P09238 476 aa23.23■■□□□ 1.31
TTC3-203ENST00000399010 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
TTC3-203ENST00000399010 NBPF5PQ86XG9 351 aaPredicted RBP23.23■■□□□ 1.31
TTC3-203ENST00000399010 FAM89AQ96GI7 184 aa23.23■■□□□ 1.31
TTC3-203ENST00000399010 UTP14AQ9BVJ6 771 aaKnown RBP23.23■■□□□ 1.31
TTC3-203ENST00000399010 NTSR2O95665 410 aa23.23■■□□□ 1.31
TTC3-203ENST00000399010 NUTM1Q86Y26 1132 aa23.22■■□□□ 1.31
TTC3-203ENST00000399010 SYNE4Q8N205 404 aa23.22■■□□□ 1.31
TTC3-203ENST00000399010 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
TTC3-203ENST00000399010 NPHP1O15259 732 aa23.21■■□□□ 1.31
TTC3-203ENST00000399010 ZBTB38Q8NAP3 1195 aaPredicted RBP23.21■■□□□ 1.31
TTC3-203ENST00000399010 DDX60Q8IY21 1712 aaKnown RBP23.21■■□□□ 1.31
TTC3-203ENST00000399010 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
TTC3-203ENST00000399010 H7C1W4 665 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 SERPINB2P05120 415 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 PCCAP05165 728 aaPredicted RBP23.2■■□□□ 1.3
TTC3-203ENST00000399010 UBTFL1P0CB47 393 aaPredicted RBP23.2■■□□□ 1.3
TTC3-203ENST00000399010 ATF5Q9Y2D1 282 aaPredicted RBP23.2■■□□□ 1.3
TTC3-203ENST00000399010 LAMB2P55268 1798 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 GNAI3P08754 354 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 GTF2E1P29083 439 aaPredicted RBP23.2■■□□□ 1.3
TTC3-203ENST00000399010 CCDC24Q8N4L8 307 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 MTFR1LQ9H019 292 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 C1orf115Q9H7X2 142 aa23.2■■□□□ 1.3
TTC3-203ENST00000399010 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
TTC3-203ENST00000399010 UTYO14607 1347 aa23.19■■□□□ 1.3
TTC3-203ENST00000399010 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
TTC3-203ENST00000399010 NYXQ9GZU5 481 aa23.19■■□□□ 1.3
TTC3-203ENST00000399010 PARP3Q9Y6F1 533 aa23.19■■□□□ 1.3
TTC3-203ENST00000399010 MYH3P11055 1940 aa23.18■■□□□ 1.3
TTC3-203ENST00000399010 CASP7P55210 303 aa23.18■■□□□ 1.3
TTC3-203ENST00000399010 ERFEQ4G0M1 354 aa23.18■■□□□ 1.3
TTC3-203ENST00000399010 TPTE2Q6XPS3 522 aa23.18■■□□□ 1.3
TTC3-203ENST00000399010 CNBD1Q8NA66 436 aa23.18■■□□□ 1.3
TTC3-203ENST00000399010 ZBTB40Q9NUA8 1239 aa23.18■■□□□ 1.3
TTC3-203ENST00000399010 CHMP4BQ9H444 224 aaKnown RBP23.17■■□□□ 1.3
TTC3-203ENST00000399010 LRRFIP2Q9Y608 721 aaKnown RBP23.17■■□□□ 1.3
TTC3-203ENST00000399010 ABCC12Q96J65 1359 aa23.17■■□□□ 1.3
TTC3-203ENST00000399010 PRR5LQ6MZQ0 368 aa23.17■■□□□ 1.3
TTC3-203ENST00000399010 SUCLG2Q96I99 432 aa23.17■■□□□ 1.3
TTC3-203ENST00000399010 IRS4O14654 1257 aaPredicted RBP23.16■■□□□ 1.3
TTC3-203ENST00000399010 TNRC6CQ9HCJ0 1690 aaKnown RBP23.16■■□□□ 1.3
TTC3-203ENST00000399010 HCLS1P14317 486 aaPredicted RBP23.15■■□□□ 1.3
TTC3-203ENST00000399010 CDHR2Q9BYE9 1310 aa23.15■■□□□ 1.3
TTC3-203ENST00000399010 GNAI2P04899 355 aa23.15■■□□□ 1.3
TTC3-203ENST00000399010 ANKRD31Q8N7Z5 1873 aa23.14■■□□□ 1.29
TTC3-203ENST00000399010 KAZALD1Q96I82 304 aa23.14■■□□□ 1.29
TTC3-203ENST00000399010 ST5P78524 1137 aa23.13■■□□□ 1.29
TTC3-203ENST00000399010 EPHA10Q5JZY3 1008 aa23.13■■□□□ 1.29
TTC3-203ENST00000399010 BICC1Q9H694 974 aaKnown RBP23.12■■□□□ 1.29
TTC3-203ENST00000399010 POLD1P28340 1107 aa23.12■■□□□ 1.29
TTC3-203ENST00000399010 HDAC5Q9UQL6 1122 aa23.11■■□□□ 1.29
TTC3-203ENST00000399010 FOXO4P98177 505 aa23.1■■□□□ 1.29
TTC3-203ENST00000399010 PDE8AO60658 829 aa23.09■■□□□ 1.29
TTC3-203ENST00000399010 C3orf67Q6ZVT6 689 aa23.09■■□□□ 1.29
TTC3-203ENST00000399010 CCDC85AQ96PX6 553 aaPredicted RBP23.09■■□□□ 1.29
TTC3-203ENST00000399010 SLC10A5Q5PT55 438 aa23.09■■□□□ 1.29
TTC3-203ENST00000399010 ANKRD44Q8N8A2 993 aa23.09■■□□□ 1.29
TTC3-203ENST00000399010 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
TTC3-203ENST00000399010 SGIP1Q9BQI5 828 aa23.08■■□□□ 1.29
TTC3-203ENST00000399010 CHMP3Q9Y3E7 222 aa23.08■■□□□ 1.29
TTC3-203ENST00000399010 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.28
TTC3-203ENST00000399010 PTGER2P43116 358 aa23.08■■□□□ 1.28
TTC3-203ENST00000399010 CTSWP56202 376 aa23.08■■□□□ 1.28
TTC3-203ENST00000399010 LMBR1LQ6UX01 489 aa23.08■■□□□ 1.28
TTC3-203ENST00000399010 PCDHB15Q9Y5E8 787 aa23.08■■□□□ 1.28
TTC3-203ENST00000399010 AAMPQ13685 434 aa23.07■■□□□ 1.28
TTC3-203ENST00000399010 SPON1Q9HCB6 807 aa23.07■■□□□ 1.28
TTC3-203ENST00000399010 CEP85Q6P2H3 762 aa23.06■■□□□ 1.28
TTC3-203ENST00000399010 NLRP3Q96P20 1036 aa23.06■■□□□ 1.28
TTC3-203ENST00000399010 RIC1Q4ADV7 1423 aa23.06■■□□□ 1.28
TTC3-203ENST00000399010 TAF1P21675 1872 aa23.06■■□□□ 1.28
TTC3-203ENST00000399010 COL11A2P13942 1736 aaPredicted RBP23.06■■□□□ 1.28
TTC3-203ENST00000399010 RABL6Q3YEC7 729 aaPredicted RBP23.05■■□□□ 1.28
TTC3-203ENST00000399010 C10orf71Q711Q0 1435 aa23.05■■□□□ 1.28
TTC3-203ENST00000399010 TTLL11Q8NHH1 800 aa23.05■■□□□ 1.28
TTC3-203ENST00000399010 KIF13BQ9NQT8 1826 aa23.05■■□□□ 1.28
TTC3-203ENST00000399010 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms