RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 HSP90AB4PQ58FF6 505 aa11.87□□□□□ -0.51
CAPN11-201ENST00000398776 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
CAPN11-201ENST00000398776 RAPGEF4Q8WZA2 1011 aa11.87□□□□□ -0.51
CAPN11-201ENST00000398776 HYPKQ9NX55 129 aa11.87□□□□□ -0.51
CAPN11-201ENST00000398776 TULP2O00295 520 aa11.87□□□□□ -0.51
CAPN11-201ENST00000398776 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
CAPN11-201ENST00000398776 BRD2P25440 801 aaKnown RBP11.87□□□□□ -0.51
CAPN11-201ENST00000398776 MTX1Q13505 466 aa11.87□□□□□ -0.51
CAPN11-201ENST00000398776 ADCY5O95622 1261 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 PPP1R42Q7Z4L9 355 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 TMX3Q96JJ7 454 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 TIGD1Q96MW7 591 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 MORC2Q9Y6X9 1032 aaPredicted RBP11.86□□□□□ -0.51
CAPN11-201ENST00000398776 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
CAPN11-201ENST00000398776 CPDO75976 1380 aa11.85□□□□□ -0.51
CAPN11-201ENST00000398776 RIOK3O14730 519 aaKnown RBP11.85□□□□□ -0.51
CAPN11-201ENST00000398776 TATP17735 454 aaPredicted RBP11.85□□□□□ -0.51
CAPN11-201ENST00000398776 ZC3H6P61129 1189 aaKnown RBP11.85□□□□□ -0.51
CAPN11-201ENST00000398776 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
CAPN11-201ENST00000398776 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
CAPN11-201ENST00000398776 CTNNA3Q9UI47 895 aa11.85□□□□□ -0.51
CAPN11-201ENST00000398776 CHAF1AQ13111 956 aaPredicted RBP11.85□□□□□ -0.51
CAPN11-201ENST00000398776 DDX41Q9UJV9 622 aaKnown RBP11.85□□□□□ -0.51
CAPN11-201ENST00000398776 MRC1P22897 1456 aa11.85□□□□□ -0.51
CAPN11-201ENST00000398776 PHF14O94880 888 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 BRD1O95696 1058 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
CAPN11-201ENST00000398776 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
CAPN11-201ENST00000398776 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
CAPN11-201ENST00000398776 TSPYL1Q9H0U9 437 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPN11-201ENST00000398776 SRGAP3O43295 1099 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 SURF6O75683 361 aaKnown RBP11.84□□□□□ -0.51
CAPN11-201ENST00000398776 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
CAPN11-201ENST00000398776 IL17RAQ96F46 866 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
CAPN11-201ENST00000398776 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.51
CAPN11-201ENST00000398776 TPM3P06753 285 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 HCLS1P14317 486 aaPredicted RBP11.83□□□□□ -0.52
CAPN11-201ENST00000398776 PHKG2P15735 406 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 TERF2Q15554 542 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 CREBRFQ8IUR6 639 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 RHPN1Q8TCX5 695 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 XIRP1Q702N8 1843 aaKnown RBP11.83□□□□□ -0.52
CAPN11-201ENST00000398776 CHMLP26374 656 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 ANAPC15P60006 121 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 ZNF790Q6PG37 636 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 USP48Q86UV5 1035 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 MAP3K2Q9Y2U5 619 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 UTYO14607 1347 aa11.83□□□□□ -0.52
CAPN11-201ENST00000398776 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
CAPN11-201ENST00000398776 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
CAPN11-201ENST00000398776 LINS1Q8NG48 757 aa11.82□□□□□ -0.52
CAPN11-201ENST00000398776 MEGF6O75095 1541 aa11.82□□□□□ -0.52
CAPN11-201ENST00000398776 C5P01031 1676 aa11.82□□□□□ -0.52
CAPN11-201ENST00000398776 MCCP23508 829 aa11.82□□□□□ -0.52
CAPN11-201ENST00000398776 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
CAPN11-201ENST00000398776 TTC41PQ6P2S7 1318 aa11.81□□□□□ -0.52
CAPN11-201ENST00000398776 ANXA1P04083 346 aa11.81□□□□□ -0.52
CAPN11-201ENST00000398776 MCM2P49736 904 aa11.81□□□□□ -0.52
CAPN11-201ENST00000398776 IRX3P78415 501 aaPredicted RBP11.81□□□□□ -0.52
CAPN11-201ENST00000398776 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
CAPN11-201ENST00000398776 ERC1Q8IUD2 1116 aa11.81□□□□□ -0.52
CAPN11-201ENST00000398776 C9orf78Q9NZ63 289 aaPredicted RBP11.81□□□□□ -0.52
CAPN11-201ENST00000398776 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 PDIA6Q15084 440 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 FAM53CQ9NYF3 392 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 SPC24Q8NBT2 197 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
CAPN11-201ENST00000398776 PI4K2BQ8TCG2 481 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 IL1RAPL2Q9NP60 686 aa11.8□□□□□ -0.52
CAPN11-201ENST00000398776 GRM8O00222 908 aa11.79□□□□□ -0.52
CAPN11-201ENST00000398776 CSB-PGBD3P0DP91 1061 aa11.79□□□□□ -0.52
CAPN11-201ENST00000398776 CAPN2P17655 700 aa11.79□□□□□ -0.52
CAPN11-201ENST00000398776 TSHZ3Q63HK5 1081 aa11.79□□□□□ -0.52
CAPN11-201ENST00000398776 KDM4AO75164 1064 aa11.79□□□□□ -0.52
CAPN11-201ENST00000398776 PYCARDQ9ULZ3 195 aa11.79□□□□□ -0.52
CAPN11-201ENST00000398776 LAMB4A4D0S4 1761 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 CNTROBQ8N137 903 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
CAPN11-201ENST00000398776 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
CAPN11-201ENST00000398776 PALD1Q9ULE6 856 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 GLRX3O76003 335 aaKnown RBP11.78□□□□□ -0.52
CAPN11-201ENST00000398776 SNRPA1P09661 255 aaKnown RBP11.78□□□□□ -0.52
CAPN11-201ENST00000398776 CCDC183Q5T5S1 534 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 NUTM1Q86Y26 1132 aa11.78□□□□□ -0.52
CAPN11-201ENST00000398776 CLASRPQ8N2M8 674 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms