RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 IL17RAQ96F46 866 aa18.56■□□□□ 0.56
MBD1-209ENST00000398495 LSG1Q9H089 658 aaKnown RBP18.56■□□□□ 0.56
MBD1-209ENST00000398495 ZNF330Q9Y3S2 320 aaPredicted RBP18.56■□□□□ 0.56
MBD1-209ENST00000398495 RAD50Q92878 1312 aa18.56■□□□□ 0.56
MBD1-209ENST00000398495 EXOC5O00471 708 aa18.55■□□□□ 0.56
MBD1-209ENST00000398495 CWC27Q6UX04 472 aaKnown RBP18.55■□□□□ 0.56
MBD1-209ENST00000398495 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
MBD1-209ENST00000398495 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
MBD1-209ENST00000398495 EPB41L2O43491 1005 aaKnown RBP18.55■□□□□ 0.56
MBD1-209ENST00000398495 NEK4P51957 841 aa18.55■□□□□ 0.56
MBD1-209ENST00000398495 DIAPH3Q9NSV4 1193 aa18.55■□□□□ 0.56
MBD1-209ENST00000398495 HSPA4P34932 840 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 SLC4A9Q96Q91 983 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 TEX13AQ9BXU3 409 aaPredicted RBP18.54■□□□□ 0.56
MBD1-209ENST00000398495 TNNI3KQ59H18 835 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 ISCA1Q9BUE6 129 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 CHMP3Q9Y3E7 222 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 FPGT-TNNI3KV9GXZ4 949 aa18.54■□□□□ 0.56
MBD1-209ENST00000398495 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
MBD1-209ENST00000398495 SPATA31A1Q5TZJ5 1347 aa18.52■□□□□ 0.56
MBD1-209ENST00000398495 DBNLQ9UJU6 430 aaKnown RBP18.52■□□□□ 0.56
MBD1-209ENST00000398495 STARD3NLO95772 234 aa18.51■□□□□ 0.55
MBD1-209ENST00000398495 SSFA2P28290 1259 aa18.51■□□□□ 0.55
MBD1-209ENST00000398495 TCIRG1Q13488 830 aa18.51■□□□□ 0.55
MBD1-209ENST00000398495 KIF6Q6ZMV9 814 aa18.51■□□□□ 0.55
MBD1-209ENST00000398495 SYTL4Q96C24 671 aaPredicted RBP18.51■□□□□ 0.55
MBD1-209ENST00000398495 KAT6BQ8WYB5 2073 aa18.51■□□□□ 0.55
MBD1-209ENST00000398495 RUFY2Q8WXA3 655 aa18.51■□□□□ 0.55
MBD1-209ENST00000398495 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
MBD1-209ENST00000398495 NUTM2BA6NNL0 878 aaPredicted RBP18.5■□□□□ 0.55
MBD1-209ENST00000398495 NUTM2EB1AL46 878 aaPredicted RBP18.5■□□□□ 0.55
MBD1-209ENST00000398495 CYP19A1P11511 503 aaPredicted RBP18.5■□□□□ 0.55
MBD1-209ENST00000398495 PRIM1P49642 420 aaKnown RBP18.5■□□□□ 0.55
MBD1-209ENST00000398495 NUTM2AQ8IVF1 878 aaPredicted RBP18.5■□□□□ 0.55
MBD1-209ENST00000398495 ZGPATQ8N5A5 531 aaKnown RBP18.5■□□□□ 0.55
MBD1-209ENST00000398495 SNX14Q9Y5W7 946 aa18.5■□□□□ 0.55
MBD1-209ENST00000398495 ANKRD36CQ5JPF3 1778 aa18.5■□□□□ 0.55
MBD1-209ENST00000398495 PTH1RQ03431 593 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 NMIQ13287 307 aaPredicted RBP18.49■□□□□ 0.55
MBD1-209ENST00000398495 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 ATG9AQ7Z3C6 839 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 PIP4K2BP78356 416 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 FAM227BQ96M60 508 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 DBNDD2Q9BQY9 259 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
MBD1-209ENST00000398495 TMX3Q96JJ7 454 aa18.48■□□□□ 0.55
MBD1-209ENST00000398495 FSD1Q9BTV5 496 aa18.48■□□□□ 0.55
MBD1-209ENST00000398495 ATP5JP18859 108 aa18.48■□□□□ 0.55
MBD1-209ENST00000398495 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
MBD1-209ENST00000398495 RASEFQ8IZ41 740 aa18.48■□□□□ 0.55
MBD1-209ENST00000398495 EDC3Q96F86 508 aaKnown RBP18.48■□□□□ 0.55
MBD1-209ENST00000398495 ZNF594Q96JF6 807 aaPredicted RBP18.48■□□□□ 0.55
MBD1-209ENST00000398495 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
MBD1-209ENST00000398495 ZBTB1Q9Y2K1 713 aa18.48■□□□□ 0.55
MBD1-209ENST00000398495 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
MBD1-209ENST00000398495 MCM2P49736 904 aa18.47■□□□□ 0.55
MBD1-209ENST00000398495 TRIM28Q13263 835 aaKnown RBP18.47■□□□□ 0.55
MBD1-209ENST00000398495 ARXQ96QS3 562 aa18.47■□□□□ 0.55
MBD1-209ENST00000398495 HIP1O00291 1037 aa18.47■□□□□ 0.55
MBD1-209ENST00000398495 HLFQ16534 295 aa18.47■□□□□ 0.55
MBD1-209ENST00000398495 THRAP3Q9Y2W1 955 aaKnown RBP18.47■□□□□ 0.55
MBD1-209ENST00000398495 SPATA31A5Q5VU36 1347 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 SPATA31A7Q8IWB4 1347 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 A0A0D9SFI3 127 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 DDB1Q16531 1140 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 GBP4Q96PP9 640 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 SLIT2O94813 1529 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 ZNF609O15014 1411 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 CCDC171Q6TFL3 1326 aa18.46■□□□□ 0.55
MBD1-209ENST00000398495 PCCAP05165 728 aaPredicted RBP18.45■□□□□ 0.54
MBD1-209ENST00000398495 GIGYF2Q6Y7W6 1299 aaKnown RBP18.45■□□□□ 0.54
MBD1-209ENST00000398495 NDUFB9Q9Y6M9 179 aa18.45■□□□□ 0.54
MBD1-209ENST00000398495 NUP98P52948 1817 aa18.45■□□□□ 0.54
MBD1-209ENST00000398495 MED23Q9ULK4 1368 aa18.45■□□□□ 0.54
MBD1-209ENST00000398495 CYP2E1P05181 493 aaPredicted RBP18.45■□□□□ 0.54
MBD1-209ENST00000398495 PKP1Q13835 747 aa18.45■□□□□ 0.54
MBD1-209ENST00000398495 CWC22Q9HCG8 908 aaKnown RBP18.45■□□□□ 0.54
MBD1-209ENST00000398495 EYA2O00167 538 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 IL15P40933 162 aaPredicted RBP18.44■□□□□ 0.54
MBD1-209ENST00000398495 CUL4AQ13619 759 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
MBD1-209ENST00000398495 FAM89AQ96GI7 184 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 ACSBG1Q96GR2 724 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
MBD1-209ENST00000398495 SNRKQ9NRH2 765 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
MBD1-209ENST00000398495 A0A0G2JS52 829 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 TRAK2O60296 914 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 GPTP24298 496 aa18.44■□□□□ 0.54
MBD1-209ENST00000398495 PRPF40BQ6NWY9 871 aaKnown RBP18.43■□□□□ 0.54
MBD1-209ENST00000398495 DNAJC2Q99543 621 aaKnown RBP18.43■□□□□ 0.54
MBD1-209ENST00000398495 CIAO1O76071 339 aa18.42■□□□□ 0.54
MBD1-209ENST00000398495 NUCB2P80303 420 aa18.42■□□□□ 0.54
MBD1-209ENST00000398495 NLRP10Q86W26 655 aa18.42■□□□□ 0.54
MBD1-209ENST00000398495 SYNE4Q8N205 404 aa18.42■□□□□ 0.54
MBD1-209ENST00000398495 ZBTB38Q8NAP3 1195 aaPredicted RBP18.42■□□□□ 0.54
MBD1-209ENST00000398495 KCNB2Q92953 911 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms