RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 MEIS3Q99687 375 aa22.78■■□□□ 1.24
MBD1-208ENST00000398493 ADCY9O60503 1353 aa22.77■■□□□ 1.24
MBD1-208ENST00000398493 PLBD2Q8NHP8 589 aa22.77■■□□□ 1.24
MBD1-208ENST00000398493 ERVV-1B6SEH8 477 aa22.76■■□□□ 1.23
MBD1-208ENST00000398493 ZBTB7AO95365 584 aa22.76■■□□□ 1.23
MBD1-208ENST00000398493 CEP85Q6P2H3 762 aa22.76■■□□□ 1.23
MBD1-208ENST00000398493 GNAI2P04899 355 aa22.75■■□□□ 1.23
MBD1-208ENST00000398493 KSR2Q6VAB6 950 aa22.75■■□□□ 1.23
MBD1-208ENST00000398493 MAP3K2Q9Y2U5 619 aa22.75■■□□□ 1.23
MBD1-208ENST00000398493 RIC3Q7Z5B4 369 aa22.75■■□□□ 1.23
MBD1-208ENST00000398493 DAXXQ9UER7 740 aaPredicted RBP22.75■■□□□ 1.23
MBD1-208ENST00000398493 TBC1D9BQ66K14 1250 aa22.74■■□□□ 1.23
MBD1-208ENST00000398493 GIGYF2Q6Y7W6 1299 aaKnown RBP22.74■■□□□ 1.23
MBD1-208ENST00000398493 CASZ1Q86V15 1759 aa22.74■■□□□ 1.23
MBD1-208ENST00000398493 PXDNLA1KZ92 1463 aa22.74■■□□□ 1.23
MBD1-208ENST00000398493 DDX58O95786 925 aaKnown RBP22.73■■□□□ 1.23
MBD1-208ENST00000398493 BICDL1Q6ZP65 573 aa22.73■■□□□ 1.23
MBD1-208ENST00000398493 ATP10DQ9P241 1426 aa22.72■■□□□ 1.23
MBD1-208ENST00000398493 CLEC4GQ6UXB4 293 aa22.72■■□□□ 1.23
MBD1-208ENST00000398493 SLC16A10Q8TF71 515 aa22.72■■□□□ 1.23
MBD1-208ENST00000398493 ATF5Q9Y2D1 282 aaPredicted RBP22.72■■□□□ 1.23
MBD1-208ENST00000398493 SCN7AQ01118 1682 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 ATP5J2-PTCD1G3V325 749 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 GPTP24298 496 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 TCIRG1Q13488 830 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 NFIXQ14938 502 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 NLGN1Q8N2Q7 840 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 DNAAF4Q8WXU2 420 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 MYD88Q99836 296 aa22.71■■□□□ 1.23
MBD1-208ENST00000398493 METTL22Q9BUU2 404 aaPredicted RBP22.71■■□□□ 1.23
MBD1-208ENST00000398493 BCORQ6W2J9 1755 aa22.7■■□□□ 1.22
MBD1-208ENST00000398493 TM4SF1P30408 202 aa22.7■■□□□ 1.22
MBD1-208ENST00000398493 BMP2KLQ5H9B9 411 aa22.7■■□□□ 1.22
MBD1-208ENST00000398493 SEC24BO95487 1268 aa22.69■■□□□ 1.22
MBD1-208ENST00000398493 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
MBD1-208ENST00000398493 SRCIN1Q9C0H9 1055 aa22.69■■□□□ 1.22
MBD1-208ENST00000398493 MTFR1LQ9H019 292 aa22.69■■□□□ 1.22
MBD1-208ENST00000398493 ZNF652Q9Y2D9 606 aa22.69■■□□□ 1.22
MBD1-208ENST00000398493 UBN2Q6ZU65 1347 aa22.69■■□□□ 1.22
MBD1-208ENST00000398493 IGKV5-2P06315 115 aa22.68■■□□□ 1.22
MBD1-208ENST00000398493 DDR1Q08345 913 aa22.68■■□□□ 1.22
MBD1-208ENST00000398493 NIP7Q9Y221 180 aaKnown RBP eCLIP22.68■■□□□ 1.22
MBD1-208ENST00000398493 RGL2O15211 777 aa22.68■■□□□ 1.22
MBD1-208ENST00000398493 NUP98P52948 1817 aa22.67■■□□□ 1.22
MBD1-208ENST00000398493 MMP10P09238 476 aa22.67■■□□□ 1.22
MBD1-208ENST00000398493 CWF19L2Q2TBE0 894 aaKnown RBP22.67■■□□□ 1.22
MBD1-208ENST00000398493 ISCA1Q9BUE6 129 aa22.67■■□□□ 1.22
MBD1-208ENST00000398493 BEND3Q5T5X7 828 aa22.66■■□□□ 1.22
MBD1-208ENST00000398493 ARFGEF2Q9Y6D5 1785 aa22.66■■□□□ 1.22
MBD1-208ENST00000398493 EIF5BO60841 1220 aaKnown RBP22.66■■□□□ 1.22
MBD1-208ENST00000398493 UBTFL1P0CB47 393 aaPredicted RBP22.66■■□□□ 1.22
MBD1-208ENST00000398493 ATP8B2P98198 1209 aa22.66■■□□□ 1.22
MBD1-208ENST00000398493 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
MBD1-208ENST00000398493 POLRMTO00411 1230 aaKnown RBP22.65■■□□□ 1.22
MBD1-208ENST00000398493 HSP90AB3PQ58FF7 597 aa22.65■■□□□ 1.22
MBD1-208ENST00000398493 SUSD4Q5VX71 490 aa22.65■■□□□ 1.22
MBD1-208ENST00000398493 SETDB2Q96T68 719 aa22.65■■□□□ 1.22
MBD1-208ENST00000398493 SGIP1Q9BQI5 828 aa22.65■■□□□ 1.22
MBD1-208ENST00000398493 N4BP2Q86UW6 1770 aaPredicted RBP22.64■■□□□ 1.22
MBD1-208ENST00000398493 PTGER2P43116 358 aa22.64■■□□□ 1.22
MBD1-208ENST00000398493 NLRP10Q86W26 655 aa22.64■■□□□ 1.22
MBD1-208ENST00000398493 USP44Q9H0E7 712 aa22.64■■□□□ 1.21
MBD1-208ENST00000398493 HDAC5Q9UQL6 1122 aa22.64■■□□□ 1.21
MBD1-208ENST00000398493 NEURL1BA8MQ27 555 aa22.63■■□□□ 1.21
MBD1-208ENST00000398493 TRIM28Q13263 835 aaKnown RBP22.62■■□□□ 1.21
MBD1-208ENST00000398493 LINS1Q8NG48 757 aa22.62■■□□□ 1.21
MBD1-208ENST00000398493 TBC1D32Q96NH3 1257 aa22.62■■□□□ 1.21
MBD1-208ENST00000398493 SERPINB2P05120 415 aa22.61■■□□□ 1.21
MBD1-208ENST00000398493 NEXNQ0ZGT2 675 aa22.61■■□□□ 1.21
MBD1-208ENST00000398493 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
MBD1-208ENST00000398493 CCDC24Q8N4L8 307 aa22.61■■□□□ 1.21
MBD1-208ENST00000398493 BECN1Q14457 450 aa22.61■■□□□ 1.21
MBD1-208ENST00000398493 SYNE4Q8N205 404 aa22.61■■□□□ 1.21
MBD1-208ENST00000398493 JARID2Q92833 1246 aaPredicted RBP22.61■■□□□ 1.21
MBD1-208ENST00000398493 CARMIL3Q8ND23 1372 aa22.6■■□□□ 1.21
MBD1-208ENST00000398493 LRRFIP2Q9Y608 721 aaKnown RBP22.6■■□□□ 1.21
MBD1-208ENST00000398493 ALDH1L1O75891 902 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 NTSR2O95665 410 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 PARP10Q53GL7 1025 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 RTL5Q5HYW3 569 aaPredicted RBP22.59■■□□□ 1.21
MBD1-208ENST00000398493 NUTM1Q86Y26 1132 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 CCDC191Q8NCU4 936 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 SPON1Q9HCB6 807 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 PARP3Q9Y6F1 533 aa22.59■■□□□ 1.21
MBD1-208ENST00000398493 MFAP1P55081 439 aaKnown RBP22.59■■□□□ 1.21
MBD1-208ENST00000398493 NBPF5PQ86XG9 351 aaPredicted RBP22.59■■□□□ 1.21
MBD1-208ENST00000398493 CWC25Q9NXE8 425 aaPredicted RBP22.59■■□□□ 1.21
MBD1-208ENST00000398493 GCKRQ14397 625 aa22.58■■□□□ 1.21
MBD1-208ENST00000398493 PRR5LQ6MZQ0 368 aa22.58■■□□□ 1.21
MBD1-208ENST00000398493 POLD1P28340 1107 aa22.57■■□□□ 1.2
MBD1-208ENST00000398493 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
MBD1-208ENST00000398493 UTP14AQ9BVJ6 771 aaKnown RBP22.57■■□□□ 1.2
MBD1-208ENST00000398493 C22orf23Q9BZE7 217 aa22.57■■□□□ 1.2
MBD1-208ENST00000398493 TRMT112Q9UI30 125 aaKnown RBP22.57■■□□□ 1.2
MBD1-208ENST00000398493 ANKRD36CQ5JPF3 1778 aa22.57■■□□□ 1.2
MBD1-208ENST00000398493 COL24A1Q17RW2 1714 aa22.57■■□□□ 1.2
MBD1-208ENST00000398493 APBB1O00213 710 aa22.57■■□□□ 1.2
MBD1-208ENST00000398493 ERFEQ4G0M1 354 aa22.56■■□□□ 1.2
MBD1-208ENST00000398493 PPP1R42Q7Z4L9 355 aa22.56■■□□□ 1.2
MBD1-208ENST00000398493 TTC22Q5TAA0 569 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms