RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 PTPN14Q15678 1187 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 ELF2Q15723 593 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.23
PUM3-202ENST00000397885 ST7Q9NRC1 585 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 POLKQ9UBT6 870 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 FYB1O15117 783 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 SYT10Q6XYQ8 523 aa13.61□□□□□ -0.23
PUM3-202ENST00000397885 GJD4Q96KN9 370 aaPredicted RBP13.61□□□□□ -0.23
PUM3-202ENST00000397885 PLCH1Q4KWH8 1693 aa13.6□□□□□ -0.23
PUM3-202ENST00000397885 FCHSD2O94868 740 aa13.6□□□□□ -0.23
PUM3-202ENST00000397885 TUBB4AP04350 444 aa13.6□□□□□ -0.23
PUM3-202ENST00000397885 APPP05067 770 aa13.6□□□□□ -0.23
PUM3-202ENST00000397885 ACEP12821 1306 aa13.6□□□□□ -0.23
PUM3-202ENST00000397885 SSH2Q76I76 1423 aa13.6□□□□□ -0.23
PUM3-202ENST00000397885 ZSCAN22P10073 491 aaPredicted RBP13.59□□□□□ -0.23
PUM3-202ENST00000397885 LRMPQ12912 555 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
PUM3-202ENST00000397885 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 CD163L1Q9NR16 1453 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
PUM3-202ENST00000397885 PLA2G4AP47712 749 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 ZNF75DP51815 510 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 PSD3Q9NYI0 1048 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 CRYBG1Q9Y4K1 1723 aa13.59□□□□□ -0.23
PUM3-202ENST00000397885 CAVIN2O95810 425 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 ZSCAN26Q16670 478 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 DRC7Q8IY82 874 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 GOLGA5Q8TBA6 731 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.23
PUM3-202ENST00000397885 UBXN6Q9BZV1 441 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 L2HGDHQ9H9P8 463 aa13.58□□□□□ -0.23
PUM3-202ENST00000397885 ARGLU1Q9NWB6 273 aaPredicted RBP13.58□□□□□ -0.23
PUM3-202ENST00000397885 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.24
PUM3-202ENST00000397885 LOC102724159A0A0B4J2E5 919 aa13.58□□□□□ -0.24
PUM3-202ENST00000397885 ZRANB2O95218 330 aaKnown RBP eCLIP13.58□□□□□ -0.24
PUM3-202ENST00000397885 PWP2Q15269 919 aaKnown RBP13.58□□□□□ -0.24
PUM3-202ENST00000397885 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
PUM3-202ENST00000397885 OSBPL3Q9H4L5 887 aa13.58□□□□□ -0.24
PUM3-202ENST00000397885 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
PUM3-202ENST00000397885 ERBB3P21860 1342 aa13.58□□□□□ -0.24
PUM3-202ENST00000397885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.57□□□□□ -0.24
PUM3-202ENST00000397885 A0A1B0GUL7 405 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 VPS72Q15906 364 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 SRLQ86TD4 932 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 FBXO18Q8NFZ0 1043 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
PUM3-202ENST00000397885 ZNF592Q92610 1267 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 AATKQ6ZMQ8 1374 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 FILIP1Q7Z7B0 1213 aa13.57□□□□□ -0.24
PUM3-202ENST00000397885 CACTINQ8WUQ7 758 aaKnown RBP13.57□□□□□ -0.24
PUM3-202ENST00000397885 LRRFIP2Q9Y608 721 aaKnown RBP13.57□□□□□ -0.24
PUM3-202ENST00000397885 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 MAP3K11Q16584 847 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
PUM3-202ENST00000397885 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
PUM3-202ENST00000397885 CLCN6P51797 869 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 LRRC8AQ8IWT6 810 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 C10orf67Q8IYJ2 551 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 GTF3C6Q969F1 213 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 AK7Q96M32 723 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 TRIM5Q9C035 493 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
PUM3-202ENST00000397885 GLI3P10071 1580 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 F13A1P00488 732 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 TYRO3Q06418 890 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 NEK11Q8NG66 645 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 JRKLQ9Y4A0 524 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 STX6O43752 255 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 TPM1P09493 284 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
PUM3-202ENST00000397885 PHRF1Q9P1Y6 1649 aaKnown RBP13.55□□□□□ -0.24
PUM3-202ENST00000397885 TCHHQ07283 1943 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 SARM1Q6SZW1 724 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 EXOC4Q96A65 974 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 CABP1Q9NZU7 370 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 NRBP1Q9UHY1 535 aa13.54□□□□□ -0.24
PUM3-202ENST00000397885 GNAI1P63096 354 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 NFE2L2Q16236 605 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
PUM3-202ENST00000397885 FOXD4L3Q6VB84 417 aaPredicted RBP13.53□□□□□ -0.24
PUM3-202ENST00000397885 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
PUM3-202ENST00000397885 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
PUM3-202ENST00000397885 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
PUM3-202ENST00000397885 VAMP4O75379 141 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 IVLP07476 585 aa13.53□□□□□ -0.24
PUM3-202ENST00000397885 MAGEA9P43362 315 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms