RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 PDIA6Q15084 440 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 SYNE4Q8N205 404 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 RBM17Q96I25 401 aaKnown RBP18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 PSMD1Q99460 953 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 ZNF541Q9H0D2 1346 aa18.69■□□□□ 0.58
SNRNP25-203ENST00000397876 PROSER3Q2NL68 480 aa18.68■□□□□ 0.58
SNRNP25-203ENST00000397876 ANXA1P04083 346 aa18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 HSP90AB3PQ58FF7 597 aa18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 UTP14AQ9BVJ6 771 aaKnown RBP18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 ANKRD36CQ5JPF3 1778 aa18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 RNF123Q5XPI4 1314 aa18.67■□□□□ 0.58
SNRNP25-203ENST00000397876 PPEF1O14829 653 aaPredicted RBP18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 POTEIP0CG38 1075 aa18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 LDHDQ86WU2 507 aa18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 JDP2Q8WYK2 163 aa18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 NLRP3Q96P20 1036 aa18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 LAS1LQ9Y4W2 734 aaKnown RBP18.66■□□□□ 0.58
SNRNP25-203ENST00000397876 FZD9O00144 591 aa18.65■□□□□ 0.58
SNRNP25-203ENST00000397876 CHL1O00533 1208 aa18.65■□□□□ 0.58
SNRNP25-203ENST00000397876 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
SNRNP25-203ENST00000397876 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
SNRNP25-203ENST00000397876 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
SNRNP25-203ENST00000397876 HACL1Q9UJ83 578 aa18.65■□□□□ 0.58
SNRNP25-203ENST00000397876 C3orf67Q6ZVT6 689 aa18.64■□□□□ 0.57
SNRNP25-203ENST00000397876 TMX4Q9H1E5 349 aaPredicted RBP18.64■□□□□ 0.57
SNRNP25-203ENST00000397876 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
SNRNP25-203ENST00000397876 TRIM35Q9UPQ4 493 aa18.64■□□□□ 0.57
SNRNP25-203ENST00000397876 KRT24Q2M2I5 525 aa18.63■□□□□ 0.57
SNRNP25-203ENST00000397876 EAPPQ56P03 285 aaPredicted RBP18.63■□□□□ 0.57
SNRNP25-203ENST00000397876 GPC2Q8N158 579 aa18.63■□□□□ 0.57
SNRNP25-203ENST00000397876 CREBZFQ9NS37 354 aa18.63■□□□□ 0.57
SNRNP25-203ENST00000397876 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
SNRNP25-203ENST00000397876 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 HOXB7P09629 217 aa18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 EPHX2P34913 555 aa18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 EIF6P56537 245 aaKnown RBP18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 SLC10A5Q5PT55 438 aa18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 HDGFL1Q5TGJ6 251 aa18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 LARGE2Q8N3Y3 721 aa18.62■□□□□ 0.57
SNRNP25-203ENST00000397876 PNMA8AQ86V59 439 aaPredicted RBP18.61■□□□□ 0.57
SNRNP25-203ENST00000397876 NLRP10Q86W26 655 aa18.61■□□□□ 0.57
SNRNP25-203ENST00000397876 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
SNRNP25-203ENST00000397876 CHPF2Q9P2E5 772 aa18.61■□□□□ 0.57
SNRNP25-203ENST00000397876 COL4A5P29400 1685 aa18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 ABCC4O15439 1325 aa18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 TCIRG1Q13488 830 aa18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 TRMT112Q9UI30 125 aaKnown RBP18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 CLEC11AQ9Y240 323 aa18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 LAMB2P55268 1798 aa18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 ADAMTSL1Q8N6G6 1762 aa18.6■□□□□ 0.57
SNRNP25-203ENST00000397876 SH3TC1Q8TE82 1336 aa18.59■□□□□ 0.57
SNRNP25-203ENST00000397876 PASKQ96RG2 1323 aa18.59■□□□□ 0.57
SNRNP25-203ENST00000397876 NIM1KQ8IY84 436 aa18.59■□□□□ 0.57
SNRNP25-203ENST00000397876 CFAP44Q96MT7 982 aa18.59■□□□□ 0.57
SNRNP25-203ENST00000397876 ATP6V0A2Q9Y487 856 aa18.59■□□□□ 0.57
SNRNP25-203ENST00000397876 GJA3Q9Y6H8 435 aa18.59■□□□□ 0.57
SNRNP25-203ENST00000397876 PPIP5K2O43314 1243 aa18.58■□□□□ 0.56
SNRNP25-203ENST00000397876 HCLS1P14317 486 aaPredicted RBP18.58■□□□□ 0.56
SNRNP25-203ENST00000397876 LMOD1P29536 600 aaPredicted RBP18.58■□□□□ 0.56
SNRNP25-203ENST00000397876 SLC51AQ86UW1 340 aa18.58■□□□□ 0.56
SNRNP25-203ENST00000397876 DBF4Q9UBU7 674 aaPredicted RBP18.58■□□□□ 0.56
SNRNP25-203ENST00000397876 HSPA1AP0DMV8 641 aaKnown RBP18.57■□□□□ 0.56
SNRNP25-203ENST00000397876 HSPA1BP0DMV9 641 aaKnown RBP18.57■□□□□ 0.56
SNRNP25-203ENST00000397876 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
SNRNP25-203ENST00000397876 SUPT20HQ8NEM7 779 aa18.57■□□□□ 0.56
SNRNP25-203ENST00000397876 PLBD2Q8NHP8 589 aa18.57■□□□□ 0.56
SNRNP25-203ENST00000397876 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
SNRNP25-203ENST00000397876 BBOX1O75936 387 aa18.56■□□□□ 0.56
SNRNP25-203ENST00000397876 VPS33BQ9H267 617 aa18.56■□□□□ 0.56
SNRNP25-203ENST00000397876 ITGBL1O95965 494 aaPredicted RBP18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 AOC3Q16853 763 aa18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 DUSP27Q5VZP5 1158 aa18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 DPP8Q6V1X1 898 aaPredicted RBP18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 ANKRD13DQ6ZTN6 518 aa18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 HYPKQ9NX55 129 aa18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 CNTNAP1P78357 1384 aa18.55■□□□□ 0.56
SNRNP25-203ENST00000397876 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 GRAPQ13588 217 aa18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 COL13A1Q5TAT6 717 aaPredicted RBP18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 MAP1SQ66K74 1059 aaPredicted RBP18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 GRAPLQ8TC17 118 aaPredicted RBP18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 RTFDC1Q9BY42 306 aaPredicted RBP18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 LTBP1Q14766 1721 aa18.54■□□□□ 0.56
SNRNP25-203ENST00000397876 APAF1O14727 1248 aa18.53■□□□□ 0.56
SNRNP25-203ENST00000397876 SCNN1DP51172 638 aa18.53■□□□□ 0.56
SNRNP25-203ENST00000397876 TMC4Q7Z404 712 aa18.53■□□□□ 0.56
SNRNP25-203ENST00000397876 DDX60Q8IY21 1712 aaKnown RBP18.53■□□□□ 0.56
SNRNP25-203ENST00000397876 CNTROBQ8N137 903 aa18.53■□□□□ 0.56
SNRNP25-203ENST00000397876 MPNDQ8N594 471 aa18.53■□□□□ 0.56
SNRNP25-203ENST00000397876 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms