RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
CHL1-202ENST00000397491 PTPRCP08575 1304 aa17.24■□□□□ 0.35
CHL1-202ENST00000397491 PPP2R3AQ06190 1150 aa17.24■□□□□ 0.35
CHL1-202ENST00000397491 NAA25Q14CX7 972 aa17.24■□□□□ 0.35
CHL1-202ENST00000397491 C16orf71Q8IYS4 520 aaPredicted RBP17.24■□□□□ 0.35
CHL1-202ENST00000397491 LZTFL1Q9NQ48 299 aa17.24■□□□□ 0.35
CHL1-202ENST00000397491 USP16Q9Y5T5 823 aa17.24■□□□□ 0.35
CHL1-202ENST00000397491 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
CHL1-202ENST00000397491 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
CHL1-202ENST00000397491 IFNKQ9P0W0 207 aa17.23■□□□□ 0.35
CHL1-202ENST00000397491 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
CHL1-202ENST00000397491 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
CHL1-202ENST00000397491 FAM76AQ8TAV0 307 aa17.23■□□□□ 0.35
CHL1-202ENST00000397491 ZNF526Q8TF50 670 aaPredicted RBP17.23■□□□□ 0.35
CHL1-202ENST00000397491 TSG101Q99816 390 aa17.23■□□□□ 0.35
CHL1-202ENST00000397491 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
CHL1-202ENST00000397491 ATAD2Q6PL18 1390 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 BTBD11A6QL63 1104 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 TUBB4BP68371 445 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 FBF1Q8TES7 1133 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
CHL1-202ENST00000397491 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHL1-202ENST00000397491 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 EFCAB5A4FU69 1503 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 CCDC196A0A1B0GTZ2 297 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 ZNF500O60304 480 aaPredicted RBP17.22■□□□□ 0.35
CHL1-202ENST00000397491 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
CHL1-202ENST00000397491 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
CHL1-202ENST00000397491 INTS4Q96HW7 963 aaKnown RBP17.22■□□□□ 0.35
CHL1-202ENST00000397491 BRF1Q92994 677 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
CHL1-202ENST00000397491 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
CHL1-202ENST00000397491 AKR1B10O60218 316 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 PRPF4BQ13523 1007 aaKnown RBP17.21■□□□□ 0.35
CHL1-202ENST00000397491 PAXIP1Q6ZW49 1069 aaPredicted RBP17.21■□□□□ 0.35
CHL1-202ENST00000397491 RSRC1Q96IZ7 334 aaKnown RBP17.21■□□□□ 0.35
CHL1-202ENST00000397491 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
CHL1-202ENST00000397491 MYO1BO43795 1136 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
CHL1-202ENST00000397491 KCNG4Q8TDN1 519 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 PPM1EQ8WY54 764 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 FGFR1OPO95684 399 aaKnown RBP17.21■□□□□ 0.35
CHL1-202ENST00000397491 CCDC6Q16204 474 aa17.21■□□□□ 0.35
CHL1-202ENST00000397491 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.34
CHL1-202ENST00000397491 NOP2P46087 812 aaKnown RBP17.21■□□□□ 0.34
CHL1-202ENST00000397491 CCDC96Q2M329 555 aa17.21■□□□□ 0.34
CHL1-202ENST00000397491 ESCO1Q5FWF5 840 aa17.21■□□□□ 0.34
CHL1-202ENST00000397491 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.34
CHL1-202ENST00000397491 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.34
CHL1-202ENST00000397491 MAPKBP1O60336 1514 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 TRIM21P19474 475 aaKnown RBP17.2■□□□□ 0.34
CHL1-202ENST00000397491 DMTNQ08495 405 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 HMGXB3Q12766 1538 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 ZNF213O14771 459 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 IFIT1P09914 478 aaKnown RBP17.2■□□□□ 0.34
CHL1-202ENST00000397491 CAPZA3Q96KX2 299 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 ANKS4BQ8N8V4 417 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 CTAGE1Q96RT6 745 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
CHL1-202ENST00000397491 RAB11FIP4Q86YS3 637 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
CHL1-202ENST00000397491 CYLC1P35663 651 aaPredicted RBP17.19■□□□□ 0.34
CHL1-202ENST00000397491 TUBBP07437 444 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 PPP1R9BQ96SB3 815 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 NSRP1Q9H0G5 558 aaKnown RBP17.19■□□□□ 0.34
CHL1-202ENST00000397491 MBIPQ9NS73 344 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 FLIIQ13045 1269 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 CTNNBL1Q8WYA6 563 aaPredicted RBP17.19■□□□□ 0.34
CHL1-202ENST00000397491 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 PPP1R12BO60237 982 aaPredicted RBP17.19■□□□□ 0.34
CHL1-202ENST00000397491 CETN2P41208 172 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 AK2P54819 239 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
CHL1-202ENST00000397491 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
CHL1-202ENST00000397491 AFAP1L1Q8TED9 768 aa17.18■□□□□ 0.34
CHL1-202ENST00000397491 SUPT6HQ7KZ85 1726 aaKnown RBP17.18■□□□□ 0.34
CHL1-202ENST00000397491 THEMISQ8N1K5 641 aaPredicted RBP17.18■□□□□ 0.34
CHL1-202ENST00000397491 CEP63Q96MT8 703 aa17.18■□□□□ 0.34
CHL1-202ENST00000397491 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
CHL1-202ENST00000397491 IL16Q14005 1332 aa17.18■□□□□ 0.34
CHL1-202ENST00000397491 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
CHL1-202ENST00000397491 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
CHL1-202ENST00000397491 MEIS3Q99687 375 aa17.18■□□□□ 0.34
CHL1-202ENST00000397491 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
CHL1-202ENST00000397491 PPP1R42Q7Z4L9 355 aa17.17■□□□□ 0.34
CHL1-202ENST00000397491 CARD6Q9BX69 1037 aa17.17■□□□□ 0.34
CHL1-202ENST00000397491 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
CHL1-202ENST00000397491 C6orf163Q5TEZ5 329 aa17.17■□□□□ 0.34
CHL1-202ENST00000397491 CCDC144CPQ8IYA2 1237 aa17.17■□□□□ 0.34
CHL1-202ENST00000397491 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
CHL1-202ENST00000397491 OAS2P29728 719 aaKnown RBP17.17■□□□□ 0.34
CHL1-202ENST00000397491 SARNPP82979 210 aaKnown RBP17.17■□□□□ 0.34
CHL1-202ENST00000397491 CPLX4Q7Z7G2 160 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms