RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 DDX19AQ9NUU7 478 aaKnown RBP17.42■□□□□ 0.38
CCNF-202ENST00000397066 CLIP2Q9UDT6 1046 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 CWF19L2Q2TBE0 894 aaKnown RBP17.42■□□□□ 0.38
CCNF-202ENST00000397066 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 CCDC112Q8NEF3 446 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 DNAJC25Q9H1X3 360 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 U2AF2P26368 475 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCNF-202ENST00000397066 LRMPQ12912 555 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
CCNF-202ENST00000397066 CBX8Q9HC52 389 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 TNRQ92752 1358 aa17.42■□□□□ 0.38
CCNF-202ENST00000397066 KCNQ3O43525 872 aa17.41■□□□□ 0.38
CCNF-202ENST00000397066 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
CCNF-202ENST00000397066 MRVI1Q9Y6F6 885 aa17.41■□□□□ 0.38
CCNF-202ENST00000397066 SLC27A2O14975 620 aa17.41■□□□□ 0.38
CCNF-202ENST00000397066 PDIA4P13667 645 aaKnown RBP17.41■□□□□ 0.38
CCNF-202ENST00000397066 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
CCNF-202ENST00000397066 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
CCNF-202ENST00000397066 PRDM4Q9UKN5 801 aa17.41■□□□□ 0.38
CCNF-202ENST00000397066 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCNF-202ENST00000397066 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
CCNF-202ENST00000397066 IL17RAQ96F46 866 aa17.4■□□□□ 0.38
CCNF-202ENST00000397066 ZNF771Q7L3S4 317 aaPredicted RBP17.4■□□□□ 0.38
CCNF-202ENST00000397066 FUCA2Q9BTY2 467 aa17.4■□□□□ 0.38
CCNF-202ENST00000397066 IGSF3O75054 1194 aa17.4■□□□□ 0.38
CCNF-202ENST00000397066 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
CCNF-202ENST00000397066 NRBP1Q9UHY1 535 aa17.4■□□□□ 0.38
CCNF-202ENST00000397066 LTKP29376 864 aa17.39■□□□□ 0.38
CCNF-202ENST00000397066 KDRP35968 1356 aa17.39■□□□□ 0.37
CCNF-202ENST00000397066 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
CCNF-202ENST00000397066 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
CCNF-202ENST00000397066 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
CCNF-202ENST00000397066 TMEM2Q9UHN6 1383 aa17.39■□□□□ 0.37
CCNF-202ENST00000397066 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
CCNF-202ENST00000397066 NECTIN1Q15223 517 aa17.38■□□□□ 0.37
CCNF-202ENST00000397066 TAOK2Q9UL54 1235 aa17.38■□□□□ 0.37
CCNF-202ENST00000397066 DMTNQ08495 405 aa17.38■□□□□ 0.37
CCNF-202ENST00000397066 FILIP1Q7Z7B0 1213 aa17.38■□□□□ 0.37
CCNF-202ENST00000397066 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
CCNF-202ENST00000397066 DNAJC2Q99543 621 aaKnown RBP17.38■□□□□ 0.37
CCNF-202ENST00000397066 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
CCNF-202ENST00000397066 TCHHQ07283 1943 aa17.37■□□□□ 0.37
CCNF-202ENST00000397066 ZNF75DP51815 510 aa17.37■□□□□ 0.37
CCNF-202ENST00000397066 CCDC73Q6ZRK6 1079 aa17.37■□□□□ 0.37
CCNF-202ENST00000397066 CEP170BQ9Y4F5 1589 aaPredicted RBP17.37■□□□□ 0.37
CCNF-202ENST00000397066 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
CCNF-202ENST00000397066 A0A0D9SFI3 127 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 NR1I2O75469 434 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 MAP4K1Q92918 833 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 CLSTN2Q9H4D0 955 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 CEBPAP49715 358 aaPredicted RBP17.36■□□□□ 0.37
CCNF-202ENST00000397066 BRF1Q92994 677 aa17.36■□□□□ 0.37
CCNF-202ENST00000397066 ZSCAN25Q6NSZ9 544 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
CCNF-202ENST00000397066 ALDH1L1O75891 902 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 KSR2Q6VAB6 950 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 C3P01024 1663 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 JAK2O60674 1132 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 PPFIA3O75145 1194 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 KLHDC4Q8TBB5 520 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 GTPBP4Q9BZE4 634 aaKnown RBP17.35■□□□□ 0.37
CCNF-202ENST00000397066 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
CCNF-202ENST00000397066 KINO60870 393 aaKnown RBP17.35■□□□□ 0.37
CCNF-202ENST00000397066 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
CCNF-202ENST00000397066 NRKQ7Z2Y5 1582 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 SMTNL1A8MU46 457 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 GRM8O00222 908 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 TECPR2O15040 1411 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 KRT32Q14532 448 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 RIMS1Q86UR5 1692 aaKnown RBP17.34■□□□□ 0.37
CCNF-202ENST00000397066 ELP1O95163 1332 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 NPHP1O15259 732 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 MYL6BP14649 208 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 NEK1Q96PY6 1258 aa17.34■□□□□ 0.37
CCNF-202ENST00000397066 TRMT1Q9NXH9 659 aaKnown RBP17.34■□□□□ 0.37
CCNF-202ENST00000397066 ZSCAN20P17040 1043 aaPredicted RBP17.33■□□□□ 0.37
CCNF-202ENST00000397066 ST3GAL1Q11201 340 aa17.33■□□□□ 0.37
CCNF-202ENST00000397066 CEP135Q66GS9 1140 aa17.33■□□□□ 0.37
CCNF-202ENST00000397066 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.37
CCNF-202ENST00000397066 EDC3Q96F86 508 aaKnown RBP17.33■□□□□ 0.36
CCNF-202ENST00000397066 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
CCNF-202ENST00000397066 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
CCNF-202ENST00000397066 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
CCNF-202ENST00000397066 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
CCNF-202ENST00000397066 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.36
CCNF-202ENST00000397066 HMG20BQ9P0W2 317 aa17.33■□□□□ 0.36
CCNF-202ENST00000397066 HOXB7P09629 217 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 ME1P48163 572 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 PSME1Q06323 249 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 PTPN14Q15678 1187 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 Q6ZUG5 572 aa17.32■□□□□ 0.36
CCNF-202ENST00000397066 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms