RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 DDX11Q96FC9 970 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 CPLX1O14810 134 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 SYNE4Q8N205 404 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 SSH3Q8TE77 659 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 PDRG1Q9NUG6 133 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 USP21Q9UK80 565 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 ZRSR1Q15695 479 aaKnown RBP18.21■□□□□ 0.51
MCF2L-205ENST00000397017 EVI5LQ96CN4 794 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-205ENST00000397017 JAG2Q9Y219 1238 aa18.21■□□□□ 0.51
MCF2L-205ENST00000397017 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
MCF2L-205ENST00000397017 LRP2BPQ9P2M1 347 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 FIBPO43427 364 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 NUCB2P80303 420 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 FAM227BQ96M60 508 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.2■□□□□ 0.51e-7■■□□□ 11.7
MCF2L-205ENST00000397017 EPHA10Q5JZY3 1008 aa18.2■□□□□ 0.5
MCF2L-205ENST00000397017 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-205ENST00000397017 HIP1O00291 1037 aa18.19■□□□□ 0.5
MCF2L-205ENST00000397017 RAD21O60216 631 aa18.19■□□□□ 0.5
MCF2L-205ENST00000397017 NMIQ13287 307 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-205ENST00000397017 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-205ENST00000397017 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
MCF2L-205ENST00000397017 USP26Q9BXU7 913 aa18.19■□□□□ 0.5
MCF2L-205ENST00000397017 GDPD2Q9HCC8 539 aa18.19■□□□□ 0.5
MCF2L-205ENST00000397017 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
MCF2L-205ENST00000397017 MCM4P33991 863 aa18.18■□□□□ 0.5
MCF2L-205ENST00000397017 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
MCF2L-205ENST00000397017 ZGPATQ8N5A5 531 aaKnown RBP18.18■□□□□ 0.5
MCF2L-205ENST00000397017 GNPATO15228 680 aa18.18■□□□□ 0.5
MCF2L-205ENST00000397017 ZNF652Q9Y2D9 606 aa18.18■□□□□ 0.5
MCF2L-205ENST00000397017 PSMA5P28066 241 aa18.17■□□□□ 0.5
MCF2L-205ENST00000397017 LRRC24Q50LG9 513 aa18.17■□□□□ 0.5
MCF2L-205ENST00000397017 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
MCF2L-205ENST00000397017 TAF5LO75529 589 aa18.17■□□□□ 0.5
MCF2L-205ENST00000397017 PUS3Q9BZE2 481 aaKnown RBP18.17■□□□□ 0.5
MCF2L-205ENST00000397017 TULP1O00294 542 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-205ENST00000397017 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
MCF2L-205ENST00000397017 KCNQ2O43526 872 aa18.16■□□□□ 0.5
MCF2L-205ENST00000397017 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
MCF2L-205ENST00000397017 NBPF5PQ86XG9 351 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-205ENST00000397017 AK7Q96M32 723 aa18.16■□□□□ 0.5
MCF2L-205ENST00000397017 AKAP2Q9Y2D5 859 aa18.16■□□□□ 0.5
MCF2L-205ENST00000397017 RFC4P35249 363 aa18.16■□□□□ 0.5
MCF2L-205ENST00000397017 RNF214Q8ND24 703 aa18.16■□□□□ 0.5
MCF2L-205ENST00000397017 TNPO1Q92973 898 aaKnown RBP18.16■□□□□ 0.5
MCF2L-205ENST00000397017 A0A1B0GUL7 405 aa18.15■□□□□ 0.5
MCF2L-205ENST00000397017 RBM8AQ9Y5S9 174 aaKnown RBP18.15■□□□□ 0.5
MCF2L-205ENST00000397017 ITGA6P23229 1130 aa18.15■□□□□ 0.5
MCF2L-205ENST00000397017 TNNI3KQ59H18 835 aa18.15■□□□□ 0.5
MCF2L-205ENST00000397017 FPGT-TNNI3KV9GXZ4 949 aa18.15■□□□□ 0.5
MCF2L-205ENST00000397017 NBPF26B4DH59 902 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 SF3A1Q15459 793 aaKnown RBP18.14■□□□□ 0.49
MCF2L-205ENST00000397017 NBPF14Q5TI25 921 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 NBPF10Q6P3W6 841 aaKnown RBP18.14■□□□□ 0.49
MCF2L-205ENST00000397017 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 ATP2B1P20020 1258 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 IL15P40933 162 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-205ENST00000397017 TMX3Q96JJ7 454 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 CD2BP2O95400 341 aaKnown RBP18.14■□□□□ 0.49
MCF2L-205ENST00000397017 TCIRG1Q13488 830 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 CCDC82Q8N4S0 544 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 CCDC191Q8NCU4 936 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 PALD1Q9ULE6 856 aa18.14■□□□□ 0.49
MCF2L-205ENST00000397017 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.49
MCF2L-205ENST00000397017 ANKIB1Q9P2G1 1089 aa18.13■□□□□ 0.49
MCF2L-205ENST00000397017 CCT2P78371 535 aaKnown RBP18.13■□□□□ 0.49
MCF2L-205ENST00000397017 AIDAQ96BJ3 306 aa18.13■□□□□ 0.49
MCF2L-205ENST00000397017 LOC102724428A0A0B4J2F2 783 aa18.13■□□□□ 0.49
MCF2L-205ENST00000397017 SIK1P57059 783 aa18.13■□□□□ 0.49
MCF2L-205ENST00000397017 HLFQ16534 295 aa18.13■□□□□ 0.49
MCF2L-205ENST00000397017 SEC62Q99442 399 aaKnown RBP18.13■□□□□ 0.49
MCF2L-205ENST00000397017 L1TD1Q5T7N2 865 aaKnown RBP18.12■□□□□ 0.49
MCF2L-205ENST00000397017 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-205ENST00000397017 ITSN1Q15811 1721 aa18.12■□□□□ 0.49
MCF2L-205ENST00000397017 MINDY4BA8MYZ0 360 aa18.12■□□□□ 0.49
MCF2L-205ENST00000397017 SNAP23O00161 211 aa18.12■□□□□ 0.49
MCF2L-205ENST00000397017 EYA2O00167 538 aa18.12■□□□□ 0.49
MCF2L-205ENST00000397017 GUCY1B3Q02153 619 aa18.12■□□□□ 0.49
MCF2L-205ENST00000397017 CCNL1Q9UK58 526 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-205ENST00000397017 MST1RQ04912 1400 aa18.12■□□□□ 0.49
MCF2L-205ENST00000397017 IBTKQ9P2D0 1353 aaPredicted RBP18.12■□□□□ 0.49
MCF2L-205ENST00000397017 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
MCF2L-205ENST00000397017 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
MCF2L-205ENST00000397017 SETDB2Q96T68 719 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 ATG3Q9NT62 314 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 TDO2P48775 406 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 CCDC87Q9NVE4 849 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 MCM2P49736 904 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 ADCY9O60503 1353 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
MCF2L-205ENST00000397017 SSH2Q76I76 1423 aa18.1■□□□□ 0.49
MCF2L-205ENST00000397017 PAG1Q9NWQ8 432 aa18.1■□□□□ 0.49
MCF2L-205ENST00000397017 BRPF3Q9ULD4 1205 aa18.1■□□□□ 0.49
MCF2L-205ENST00000397017 SLFNL1Q499Z3 407 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms