RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SPATA31C1P0DKV0 1188 aa7.26□□□□□ -1.25
GABPB1-204ENST00000396464 TCF3P15923 654 aa7.26□□□□□ -1.25
GABPB1-204ENST00000396464 SREK1Q8WXA9 508 aaKnown RBP7.26□□□□□ -1.25
GABPB1-204ENST00000396464 ANKIB1Q9P2G1 1089 aa7.26□□□□□ -1.25
GABPB1-204ENST00000396464 GNEQ9Y223 722 aaKnown RBP7.26□□□□□ -1.25
GABPB1-204ENST00000396464 APBA3O96018 575 aa7.25□□□□□ -1.25
GABPB1-204ENST00000396464 XP32Q5T750 250 aa7.25□□□□□ -1.25
GABPB1-204ENST00000396464 CCDC102BQ68D86 513 aa7.25□□□□□ -1.25
GABPB1-204ENST00000396464 CEP63Q96MT8 703 aa7.25□□□□□ -1.25
GABPB1-204ENST00000396464 HCN2Q9UL51 889 aa7.25□□□□□ -1.25
GABPB1-204ENST00000396464 TMEM88BA6NKF7 163 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 EML1O00423 815 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 SIN3BO75182 1162 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 GATA4P43694 442 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 PSMA6P60900 246 aaKnown RBP7.24□□□□□ -1.25
GABPB1-204ENST00000396464 ADAMTS19Q8TE59 1207 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 C8orf37Q96NL8 207 aa7.24□□□□□ -1.25
GABPB1-204ENST00000396464 USP17L3A6NCW0 530 aa7.23□□□□□ -1.25
GABPB1-204ENST00000396464 USP17L4A6NCW7 530 aa7.23□□□□□ -1.25
GABPB1-204ENST00000396464 DOC2BQ14184 412 aa7.23□□□□□ -1.25
GABPB1-204ENST00000396464 USP17L2Q6R6M4 530 aa7.23□□□□□ -1.25
GABPB1-204ENST00000396464 USP17L1Q7RTZ2 530 aa7.23□□□□□ -1.25
GABPB1-204ENST00000396464 ZNF16P17020 682 aaPredicted RBP7.22□□□□□ -1.25
GABPB1-204ENST00000396464 EPHA4P54764 986 aa7.22□□□□□ -1.25
GABPB1-204ENST00000396464 SPEM2Q0P670 501 aa7.22□□□□□ -1.25
GABPB1-204ENST00000396464 SFSWAPQ12872 951 aaKnown RBP7.22□□□□□ -1.25
GABPB1-204ENST00000396464 PLEKHM2Q8IWE5 1019 aa7.22□□□□□ -1.25
GABPB1-204ENST00000396464 ANKRD13AQ8IZ07 590 aa7.22□□□□□ -1.25
GABPB1-204ENST00000396464 SEMA6BQ9H3T3 888 aa7.22□□□□□ -1.25
GABPB1-204ENST00000396464 HCN4Q9Y3Q4 1203 aa7.22□□□□□ -1.25
GABPB1-204ENST00000396464 ARID4BQ4LE39 1312 aaPredicted RBP7.21□□□□□ -1.25
GABPB1-204ENST00000396464 PALM3A6NDB9 673 aaPredicted RBP7.21□□□□□ -1.25
GABPB1-204ENST00000396464 SFI1A8K8P3 1242 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 M0R082 166 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 TRIM28Q13263 835 aaKnown RBP7.21□□□□□ -1.25
GABPB1-204ENST00000396464 HDGFL1Q5TGJ6 251 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 C1orf53Q5VUE5 145 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 DNAJC14Q6Y2X3 702 aaPredicted RBP7.21□□□□□ -1.25
GABPB1-204ENST00000396464 CERS3Q8IU89 383 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 OGFOD1Q8N543 542 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 ZNF417Q8TAU3 575 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 ZNF587Q96SQ5 575 aaPredicted RBP7.21□□□□□ -1.25
GABPB1-204ENST00000396464 TSPAN10Q9H1Z9 355 aaPredicted RBP7.21□□□□□ -1.25
GABPB1-204ENST00000396464 BRD7Q9NPI1 651 aa7.21□□□□□ -1.25
GABPB1-204ENST00000396464 CADPSQ9ULU8 1353 aa7.21□□□□□ -1.26
GABPB1-204ENST00000396464 ADARB2-AS1A8MUL3 147 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 PPP1R12BO60237 982 aaPredicted RBP7.2□□□□□ -1.26
GABPB1-204ENST00000396464 NCLP19338 710 aaKnown RBP7.2□□□□□ -1.26
GABPB1-204ENST00000396464 ADH7P40394 386 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 SH3PXD2AQ5TCZ1 1133 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 Q8N3U1 123 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 SLC30A3Q99726 388 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 PHACTR1Q9C0D0 580 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 MKRN1Q9UHC7 482 aaKnown RBP7.2□□□□□ -1.26
GABPB1-204ENST00000396464 KCNH4Q9UQ05 1017 aa7.2□□□□□ -1.26
GABPB1-204ENST00000396464 ATP9BO43861 1147 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 HIF1AQ16665 826 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 RAB44Q7Z6P3 723 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-204ENST00000396464 ZNF594Q96JF6 807 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-204ENST00000396464 HSH2DQ96JZ2 352 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 PPP1R12CQ9BZL4 782 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 KIAA1024Q9UPX6 916 aa7.19□□□□□ -1.26
GABPB1-204ENST00000396464 ZBTB7BO15156 539 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-204ENST00000396464 ERCC3P19447 782 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 CLDN10P78369 228 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 UBXN4Q92575 508 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 TNFRSF25Q93038 417 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 IGFLR1Q9H665 355 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 M0R2N6 131 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 TSEN2Q8NCE0 465 aaKnown RBP7.18□□□□□ -1.26
GABPB1-204ENST00000396464 CHMP7Q8WUX9 453 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-204ENST00000396464 BHMTQ93088 406 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 SUSD3Q96L08 255 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 BCL2L13Q9BXK5 485 aa7.18□□□□□ -1.26
GABPB1-204ENST00000396464 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
GABPB1-204ENST00000396464 HIRAP54198 1017 aaPredicted RBP7.17□□□□□ -1.26
GABPB1-204ENST00000396464 NOM1Q5C9Z4 860 aaKnown RBP7.17□□□□□ -1.26
GABPB1-204ENST00000396464 TRAPPC3LQ5T215 181 aa7.17□□□□□ -1.26
GABPB1-204ENST00000396464 NGLY1Q96IV0 654 aa7.17□□□□□ -1.26
GABPB1-204ENST00000396464 UBE2OQ9C0C9 1292 aaKnown RBP7.17□□□□□ -1.26
GABPB1-204ENST00000396464 ANKRD62A6NC57 917 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 LILRB5O75023 590 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 ATG7O95352 703 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 ALBP02768 609 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 RASA1P20936 1047 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 ZC3H6P61129 1189 aaKnown RBP7.16□□□□□ -1.26
GABPB1-204ENST00000396464 MICALL1Q8N3F8 863 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 GIPC2Q8TF65 315 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 PNMA5Q96PV4 448 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 PRDM6Q9NQX0 595 aa7.16□□□□□ -1.26
GABPB1-204ENST00000396464 TYRO3Q06418 890 aa7.15□□□□□ -1.27
GABPB1-204ENST00000396464 ZMYM1Q5SVZ6 1142 aa7.15□□□□□ -1.27
GABPB1-204ENST00000396464 B4GALNT3Q6L9W6 998 aa7.15□□□□□ -1.27
GABPB1-204ENST00000396464 ALDH16A1Q8IZ83 802 aa7.15□□□□□ -1.27
GABPB1-204ENST00000396464 SIX5Q8N196 739 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms