RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 C9orf78Q9NZ63 289 aaPredicted RBP11.2□□□□□ -0.62
NDE1-201ENST00000396354 HOXB7P09629 217 aa11.19□□□□□ -0.62
NDE1-201ENST00000396354 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
NDE1-201ENST00000396354 GLIPR1L2Q4G1C9 344 aa11.19□□□□□ -0.62
NDE1-201ENST00000396354 CCDC8Q9H0W5 538 aaPredicted RBP11.19□□□□□ -0.62
NDE1-201ENST00000396354 PRDM10Q9NQV6 1147 aa11.19□□□□□ -0.62
NDE1-201ENST00000396354 DIAPH3Q9NSV4 1193 aa11.19□□□□□ -0.62
NDE1-201ENST00000396354 SPATA31A3Q5VYP0 1347 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 UBAP1LF5GYI3 381 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 CEBPZQ03701 1054 aaKnown RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 COL9A3Q14050 684 aaPredicted RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 ZNF496Q96IT1 587 aaPredicted RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 ROBO1Q9Y6N7 1651 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 LARGE1O95461 756 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 UQCRHP07919 91 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 MYL6BP14649 208 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 JAKMIP1Q96N16 626 aaKnown RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 CWC22Q9HCG8 908 aaKnown RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 IGKV5-2P06315 115 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 ZNF790Q6PG37 636 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 PI4K2BQ8TCG2 481 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 EDC3Q96F86 508 aaKnown RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
NDE1-201ENST00000396354 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
NDE1-201ENST00000396354 PTMSP20962 102 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 C1QBPQ07021 282 aaKnown RBP11.17□□□□□ -0.62
NDE1-201ENST00000396354 TSPY26PQ9H489 355 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 STAP2Q9UGK3 403 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
NDE1-201ENST00000396354 CHGBP05060 677 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 AK2P54819 239 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 RHPN1Q8TCX5 695 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 SMC3Q9UQE7 1217 aa11.17□□□□□ -0.62
NDE1-201ENST00000396354 LRSAM1Q6UWE0 723 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 SUCLG2Q96I99 432 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 USP16Q9Y5T5 823 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 ADCK5Q3MIX3 580 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 RAPGEF4Q8WZA2 1011 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 BOLA2Q9H3K6 86 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
NDE1-201ENST00000396354 ZNF330Q9Y3S2 320 aaPredicted RBP11.16□□□□□ -0.62
NDE1-201ENST00000396354 MRC1P22897 1456 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 CYP2E1P05181 493 aaPredicted RBP11.16□□□□□ -0.62
NDE1-201ENST00000396354 CSB-PGBD3P0DP91 1061 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 DNM1Q05193 864 aaKnown RBP11.16□□□□□ -0.62
NDE1-201ENST00000396354 EPHA10Q5JZY3 1008 aa11.16□□□□□ -0.62
NDE1-201ENST00000396354 TOM1O60784 492 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 KDM4AO75164 1064 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 KSR2Q6VAB6 950 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 AACSQ86V21 672 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 CERKQ8TCT0 537 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 IFIT2P09913 472 aaKnown RBP11.15□□□□□ -0.62
NDE1-201ENST00000396354 ZNF445P59923 1031 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 PTH1RQ03431 593 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 CKAP2LQ8IYA6 745 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 LRRC2Q9BYS8 371 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 ISY1Q9ULR0 285 aaKnown RBP11.15□□□□□ -0.62
NDE1-201ENST00000396354 NHSL1Q5SYE7 1610 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 ABCA3Q99758 1704 aa11.15□□□□□ -0.62
NDE1-201ENST00000396354 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
NDE1-201ENST00000396354 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 BRD1O95696 1058 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 SYT1P21579 422 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 DDX11Q96FC9 970 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 PPP1R9BQ96SB3 815 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 BICC1Q9H694 974 aaKnown RBP11.14□□□□□ -0.63
NDE1-201ENST00000396354 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
NDE1-201ENST00000396354 SNX14Q9Y5W7 946 aa11.14□□□□□ -0.63
NDE1-201ENST00000396354 FGD1P98174 961 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
NDE1-201ENST00000396354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
NDE1-201ENST00000396354 GJB2P29033 226 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
NDE1-201ENST00000396354 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.13□□□□□ -0.63
NDE1-201ENST00000396354 CPDO75976 1380 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 A0A087WWV3 80 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 DRC7Q8IY82 874 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 CNTROBQ8N137 903 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 TAF6LQ9Y6J9 622 aa11.13□□□□□ -0.63
NDE1-201ENST00000396354 SASH1O94885 1247 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 ADCY5O95622 1261 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 MTX1Q13505 466 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 RUFY3Q7L099 469 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 CLASRPQ8N2M8 674 aaKnown RBP11.12□□□□□ -0.63
NDE1-201ENST00000396354 ARFGEF2Q9Y6D5 1785 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 STX6O43752 255 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
NDE1-201ENST00000396354 MBD3O95983 291 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 SLFNL1Q499Z3 407 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 IFNL2Q8IZJ0 200 aa11.12□□□□□ -0.63
NDE1-201ENST00000396354 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
NDE1-201ENST00000396354 COL5A2P05997 1499 aaPredicted RBP11.11□□□□□ -0.63
NDE1-201ENST00000396354 GOLGA6L4A6NEF3 574 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms