RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 NECTIN1Q15223 517 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 ELP1O95163 1332 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 BECN2A8MW95 431 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 SKILP12757 684 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 KRT222Q8N1A0 295 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 GPATCH3Q96I76 525 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 USP16Q9Y5T5 823 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 AACSQ86V21 672 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 IL17REQ8NFR9 667 aa21.47■■□□□ 1.03
HERPUD2-202ENST00000396081 SLFN14P0C7P3 912 aa21.46■■□□□ 1.03
HERPUD2-202ENST00000396081 PSMA5P28066 241 aa21.46■■□□□ 1.03
HERPUD2-202ENST00000396081 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
HERPUD2-202ENST00000396081 ELF2Q15723 593 aa21.46■■□□□ 1.03
HERPUD2-202ENST00000396081 KMT5BQ4FZB7 885 aa21.46■■□□□ 1.03
HERPUD2-202ENST00000396081 LRRC8AQ8IWT6 810 aa21.46■■□□□ 1.03
HERPUD2-202ENST00000396081 NMIQ13287 307 aaPredicted RBP21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 KLHL34Q8N239 644 aa21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 TTC41PQ6P2S7 1318 aa21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 H3BQV1 296 aa21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 IFFO2Q5TF58 517 aa21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 ZNF397Q8NF99 534 aaPredicted RBP21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 TAF6LQ9Y6J9 622 aa21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 TTC21AQ8NDW8 1320 aa21.45■■□□□ 1.02
HERPUD2-202ENST00000396081 SLC27A2O14975 620 aa21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 JAK2O60674 1132 aa21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 TAF3Q5VWG9 929 aa21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 MORC2Q9Y6X9 1032 aaPredicted RBP21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 NUTM2GQ5VZR2 741 aa21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 CCDC8Q9H0W5 538 aaPredicted RBP21.44■■□□□ 1.02
HERPUD2-202ENST00000396081 C11orf57Q6ZUT1 292 aaPredicted RBP21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 C9orf78Q9NZ63 289 aaPredicted RBP21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 CHPF2Q9P2E5 772 aa21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 RIMS1Q86UR5 1692 aaKnown RBP21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 HSP90B1P14625 803 aaKnown RBP21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 SYTL4Q96C24 671 aaPredicted RBP21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 EVI5LQ96CN4 794 aa21.43■■□□□ 1.02
HERPUD2-202ENST00000396081 CCDC69A6NI79 296 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 TERF2Q15554 542 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 FSD1Q9BTV5 496 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 ST7Q9NRC1 585 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 FBXO38Q6PIJ6 1188 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 BOLA2Q9H3K6 86 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 RNF20Q5VTR2 975 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 BRF1Q92994 677 aa21.42■■□□□ 1.02
HERPUD2-202ENST00000396081 USHBP1Q8N6Y0 703 aa21.41■■□□□ 1.02
HERPUD2-202ENST00000396081 ERCC4Q92889 916 aaPredicted RBP21.41■■□□□ 1.02
HERPUD2-202ENST00000396081 ANKRD1Q15327 319 aa21.41■■□□□ 1.02
HERPUD2-202ENST00000396081 A2ML1A8K2U0 1454 aa21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 CDK11BP21127 795 aaKnown RBP21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 MAP4K1Q92918 833 aa21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 A0A0D9SFI3 127 aa21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 PPFIA3O75145 1194 aa21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 NGDNQ8NEJ9 315 aaKnown RBP21.4■■□□□ 1.02
HERPUD2-202ENST00000396081 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 FLT4P35916 1363 aa21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 NRKQ7Z2Y5 1582 aa21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 HTATSF1O43719 755 aaKnown RBP21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 RPS6KB1P23443 525 aa21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 RBM43Q6ZSC3 357 aaKnown RBP21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 SIL1Q9H173 461 aa21.39■■□□□ 1.01
HERPUD2-202ENST00000396081 TOB2Q14106 344 aaPredicted RBP21.38■■□□□ 1.01
HERPUD2-202ENST00000396081 FTOQ9C0B1 505 aaKnown RBP eCLIP21.38■■□□□ 1.01
HERPUD2-202ENST00000396081 CCDC66A2RUB6 948 aa21.38■■□□□ 1.01
HERPUD2-202ENST00000396081 PDIA4P13667 645 aaKnown RBP21.38■■□□□ 1.01
HERPUD2-202ENST00000396081 GTF2E1P29083 439 aaPredicted RBP21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 PDE4CQ08493 712 aa21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 IQCB1Q15051 598 aa21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 KCNB2Q92953 911 aa21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 CCAR1Q8IX12 1150 aaKnown RBP21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 ERO1AQ96HE7 468 aa21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 LRRC2Q9BYS8 371 aa21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 SLU7O95391 586 aaKnown RBP21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 NAP1L2Q9ULW6 460 aaPredicted RBP21.37■■□□□ 1.01
HERPUD2-202ENST00000396081 C3P01024 1663 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 VGLL3A8MV65 326 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 NEMFO60524 1076 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 STX1AQ16623 288 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 MON2Q7Z3U7 1717 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 NLRP6P59044 892 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 TRERF1Q96PN7 1200 aa21.36■■□□□ 1.01
HERPUD2-202ENST00000396081 PEAK1Q9H792 1746 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 USP42Q9H9J4 1324 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 CDC25BP30305 580 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 GORABQ5T7V8 394 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 CCDC73Q6ZRK6 1079 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 CCAR2Q8N163 923 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 MRFAP1L1Q96HT8 127 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 CFAP45Q9UL16 551 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 NEO1Q92859 1461 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 RBM6P78332 1123 aaKnown RBP21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 NYAP1Q6ZVC0 841 aa21.35■■□□□ 1.01
HERPUD2-202ENST00000396081 GTF3C6Q969F1 213 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms