RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 SNED1Q8TER0 1413 aa28.96■■■□□ 2.23
PARD6B-202ENST00000396039 TMPOP42166 694 aaKnown RBP28.96■■■□□ 2.23
PARD6B-202ENST00000396039 CRAMP1Q96RY5 1269 aa28.96■■■□□ 2.23
PARD6B-202ENST00000396039 HACL1Q9UJ83 578 aa28.96■■■□□ 2.23
PARD6B-202ENST00000396039 FZD9O00144 591 aa28.95■■■□□ 2.22
PARD6B-202ENST00000396039 SUSD4Q5VX71 490 aa28.95■■■□□ 2.22
PARD6B-202ENST00000396039 TMX4Q9H1E5 349 aaPredicted RBP28.95■■■□□ 2.22
PARD6B-202ENST00000396039 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
PARD6B-202ENST00000396039 NTSR2O95665 410 aa28.94■■■□□ 2.22
PARD6B-202ENST00000396039 EIF2S2P20042 333 aaKnown RBP28.94■■■□□ 2.22
PARD6B-202ENST00000396039 HSP90AB3PQ58FF7 597 aa28.94■■■□□ 2.22
PARD6B-202ENST00000396039 OLFM4Q6UX06 510 aa28.94■■■□□ 2.22
PARD6B-202ENST00000396039 PNMA8AQ86V59 439 aaPredicted RBP28.94■■■□□ 2.22
PARD6B-202ENST00000396039 PCNTO95613 3336 aa28.94■■■□□ 2.22
PARD6B-202ENST00000396039 GPC2Q8N158 579 aa28.93■■■□□ 2.22
PARD6B-202ENST00000396039 NLRP3Q96P20 1036 aa28.92■■■□□ 2.22
PARD6B-202ENST00000396039 ADAMTSL1Q8N6G6 1762 aa28.92■■■□□ 2.22
PARD6B-202ENST00000396039 POTEIP0CG38 1075 aa28.91■■■□□ 2.22
PARD6B-202ENST00000396039 POTEJP0CG39 1038 aa28.91■■■□□ 2.22
PARD6B-202ENST00000396039 EIF6P56537 245 aaKnown RBP28.91■■■□□ 2.22
PARD6B-202ENST00000396039 PDIA6Q15084 440 aa28.91■■■□□ 2.22
PARD6B-202ENST00000396039 LRP10Q7Z4F1 713 aa28.91■■■□□ 2.22
PARD6B-202ENST00000396039 UTP14AQ9BVJ6 771 aaKnown RBP28.91■■■□□ 2.22
PARD6B-202ENST00000396039 PPEF1O14829 653 aaPredicted RBP28.9■■■□□ 2.22
PARD6B-202ENST00000396039 EPHX2P34913 555 aa28.9■■■□□ 2.22
PARD6B-202ENST00000396039 WDR43Q15061 677 aaKnown RBP eCLIP28.89■■■□□ 2.22
PARD6B-202ENST00000396039 EAPPQ56P03 285 aaPredicted RBP28.89■■■□□ 2.22
PARD6B-202ENST00000396039 PASKQ96RG2 1323 aa28.89■■■□□ 2.21
PARD6B-202ENST00000396039 SLC10A5Q5PT55 438 aa28.88■■■□□ 2.21
PARD6B-202ENST00000396039 VPS33BQ9H267 617 aa28.88■■■□□ 2.21
PARD6B-202ENST00000396039 LAMB2P55268 1798 aa28.88■■■□□ 2.21
PARD6B-202ENST00000396039 HSPA1AP0DMV8 641 aaKnown RBP28.87■■■□□ 2.21
PARD6B-202ENST00000396039 HSPA1BP0DMV9 641 aaKnown RBP28.87■■■□□ 2.21
PARD6B-202ENST00000396039 RUNDC1Q96C34 613 aa28.87■■■□□ 2.21
PARD6B-202ENST00000396039 LARGE2Q8N3Y3 721 aa28.86■■■□□ 2.21
PARD6B-202ENST00000396039 LMOD1P29536 600 aaPredicted RBP28.85■■■□□ 2.21
PARD6B-202ENST00000396039 DDX10Q13206 875 aaKnown RBP28.85■■■□□ 2.21
PARD6B-202ENST00000396039 DDX21Q9NR30 783 aaKnown RBP eCLIP28.85■■■□□ 2.21
PARD6B-202ENST00000396039 CLEC11AQ9Y240 323 aa28.85■■■□□ 2.21
PARD6B-202ENST00000396039 CHL1O00533 1208 aa28.84■■■□□ 2.21
PARD6B-202ENST00000396039 HOXB7P09629 217 aa28.84■■■□□ 2.21
PARD6B-202ENST00000396039 CNTNAP1P78357 1384 aa28.84■■■□□ 2.21
PARD6B-202ENST00000396039 TMEM88BA6NKF7 163 aa28.83■■■□□ 2.21
PARD6B-202ENST00000396039 NEUROD2Q15784 382 aa28.83■■■□□ 2.21
PARD6B-202ENST00000396039 PROSER3Q2NL68 480 aa28.83■■■□□ 2.21
PARD6B-202ENST00000396039 COL13A1Q5TAT6 717 aaPredicted RBP28.83■■■□□ 2.21
PARD6B-202ENST00000396039 COPS6Q7L5N1 327 aa28.83■■■□□ 2.21
PARD6B-202ENST00000396039 SUPT20HQ8NEM7 779 aa28.83■■■□□ 2.21
PARD6B-202ENST00000396039 ATP6V0A2Q9Y487 856 aa28.83■■■□□ 2.21
PARD6B-202ENST00000396039 NIM1KQ8IY84 436 aa28.82■■■□□ 2.2
PARD6B-202ENST00000396039 CCDC146Q8IYE0 955 aa28.82■■■□□ 2.2
PARD6B-202ENST00000396039 XAGE3Q8WTP9 111 aa28.82■■■□□ 2.2
PARD6B-202ENST00000396039 MKRN1Q9UHC7 482 aaKnown RBP28.82■■■□□ 2.2
PARD6B-202ENST00000396039 COL4A5P29400 1685 aa28.81■■■□□ 2.2
PARD6B-202ENST00000396039 ITGBL1O95965 494 aaPredicted RBP28.81■■■□□ 2.2
PARD6B-202ENST00000396039 ANXA1P04083 346 aa28.81■■■□□ 2.2
PARD6B-202ENST00000396039 AIMP1Q12904 312 aaKnown RBP28.81■■■□□ 2.2
PARD6B-202ENST00000396039 BBOX1O75936 387 aa28.8■■■□□ 2.2
PARD6B-202ENST00000396039 TCIRG1Q13488 830 aa28.8■■■□□ 2.2
PARD6B-202ENST00000396039 NLRP10Q86W26 655 aa28.8■■■□□ 2.2
PARD6B-202ENST00000396039 GJA3Q9Y6H8 435 aa28.8■■■□□ 2.2
PARD6B-202ENST00000396039 ABCC4O15439 1325 aa28.79■■■□□ 2.2
PARD6B-202ENST00000396039 SH3TC1Q8TE82 1336 aa28.79■■■□□ 2.2
PARD6B-202ENST00000396039 PPIP5K2O43314 1243 aa28.79■■■□□ 2.2
PARD6B-202ENST00000396039 C3orf67Q6ZVT6 689 aa28.79■■■□□ 2.2
PARD6B-202ENST00000396039 TNS4Q8IZW8 715 aa28.79■■■□□ 2.2
PARD6B-202ENST00000396039 NECTIN2Q92692 538 aa28.79■■■□□ 2.2
PARD6B-202ENST00000396039 LAS1LQ9Y4W2 734 aaKnown RBP28.79■■■□□ 2.2
PARD6B-202ENST00000396039 CNTROBQ8N137 903 aa28.78■■■□□ 2.2
PARD6B-202ENST00000396039 TRMT112Q9UI30 125 aaKnown RBP28.78■■■□□ 2.2
PARD6B-202ENST00000396039 TCERG1O14776 1098 aaKnown RBP28.77■■■□□ 2.2
PARD6B-202ENST00000396039 HDGFL1Q5TGJ6 251 aa28.77■■■□□ 2.2
PARD6B-202ENST00000396039 DDX46Q7L014 1031 aaKnown RBP28.77■■■□□ 2.2
PARD6B-202ENST00000396039 TMC4Q7Z404 712 aa28.77■■■□□ 2.2
PARD6B-202ENST00000396039 TRIM35Q9UPQ4 493 aa28.77■■■□□ 2.2
PARD6B-202ENST00000396039 LTBP1Q14766 1721 aa28.77■■■□□ 2.2
PARD6B-202ENST00000396039 SP8Q8IXZ3 490 aa28.76■■■□□ 2.19
PARD6B-202ENST00000396039 RTFDC1Q9BY42 306 aaPredicted RBP28.76■■■□□ 2.19
PARD6B-202ENST00000396039 CHPF2Q9P2E5 772 aa28.76■■■□□ 2.19
PARD6B-202ENST00000396039 DBF4Q9UBU7 674 aaPredicted RBP28.76■■■□□ 2.19
PARD6B-202ENST00000396039 TRPM7Q96QT4 1865 aa28.75■■■□□ 2.19
PARD6B-202ENST00000396039 PLBD2Q8NHP8 589 aa28.75■■■□□ 2.19
PARD6B-202ENST00000396039 CFAP44Q96MT7 982 aa28.75■■■□□ 2.19
PARD6B-202ENST00000396039 DDX60Q8IY21 1712 aaKnown RBP28.74■■■□□ 2.19
PARD6B-202ENST00000396039 DPP8Q6V1X1 898 aaPredicted RBP28.74■■■□□ 2.19
PARD6B-202ENST00000396039 USP50Q70EL3 339 aaPredicted RBP28.74■■■□□ 2.19
PARD6B-202ENST00000396039 LRRC37AA6NMS7 1700 aa28.74■■■□□ 2.19
PARD6B-202ENST00000396039 SCNN1DP51172 638 aa28.73■■■□□ 2.19
PARD6B-202ENST00000396039 GRAPQ13588 217 aa28.73■■■□□ 2.19
PARD6B-202ENST00000396039 AOC3Q16853 763 aa28.73■■■□□ 2.19
PARD6B-202ENST00000396039 MAP1SQ66K74 1059 aaPredicted RBP28.73■■■□□ 2.19
PARD6B-202ENST00000396039 MPNDQ8N594 471 aa28.73■■■□□ 2.19
PARD6B-202ENST00000396039 GRAPLQ8TC17 118 aaPredicted RBP28.73■■■□□ 2.19
PARD6B-202ENST00000396039 HYPKQ9NX55 129 aa28.73■■■□□ 2.19
PARD6B-202ENST00000396039 ADAMTS8Q9UP79 889 aa28.73■■■□□ 2.19
PARD6B-202ENST00000396039 HCLS1P14317 486 aaPredicted RBP28.72■■■□□ 2.19
PARD6B-202ENST00000396039 CALD1Q05682 793 aaKnown RBP28.72■■■□□ 2.19
PARD6B-202ENST00000396039 ZNRF3Q9ULT6 936 aa28.72■■■□□ 2.19
PARD6B-202ENST00000396039 CDHR2Q9BYE9 1310 aa28.71■■■□□ 2.19
PARD6B-202ENST00000396039 KRT24Q2M2I5 525 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms