RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 SPATA31A1Q5TZJ5 1347 aa14.77□□□□□ -0.04
ITGB1-202ENST00000396033 CCDC191Q8NCU4 936 aa14.77□□□□□ -0.04
ITGB1-202ENST00000396033 CDCA7Q9BWT1 371 aaPredicted RBP14.77□□□□□ -0.04
ITGB1-202ENST00000396033 CHMP3Q9Y3E7 222 aa14.77□□□□□ -0.04
ITGB1-202ENST00000396033 KAT6BQ8WYB5 2073 aa14.77□□□□□ -0.04
ITGB1-202ENST00000396033 PTPN12Q05209 780 aaKnown RBP14.77□□□□□ -0.05
ITGB1-202ENST00000396033 LMBR1LQ6UX01 489 aa14.77□□□□□ -0.05
ITGB1-202ENST00000396033 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.05
ITGB1-202ENST00000396033 ST18O60284 1047 aa14.76□□□□□ -0.05
ITGB1-202ENST00000396033 IL25Q9H293 177 aa14.76□□□□□ -0.05
ITGB1-202ENST00000396033 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
ITGB1-202ENST00000396033 TLR7Q9NYK1 1049 aaKnown RBP14.76□□□□□ -0.05
ITGB1-202ENST00000396033 THRAP3Q9Y2W1 955 aaKnown RBP14.76□□□□□ -0.05
ITGB1-202ENST00000396033 DOT1LQ8TEK3 1739 aa14.76□□□□□ -0.05
ITGB1-202ENST00000396033 DDB1Q16531 1140 aa14.76□□□□□ -0.05
ITGB1-202ENST00000396033 ARXQ96QS3 562 aa14.75□□□□□ -0.05
ITGB1-202ENST00000396033 FOXO4P98177 505 aa14.75□□□□□ -0.05
ITGB1-202ENST00000396033 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
ITGB1-202ENST00000396033 A0A0G2JS52 829 aa14.75□□□□□ -0.05
ITGB1-202ENST00000396033 DDIT3P35638 169 aa14.75□□□□□ -0.05
ITGB1-202ENST00000396033 PRIM1P49642 420 aaKnown RBP14.75□□□□□ -0.05
ITGB1-202ENST00000396033 CCDC9Q9Y3X0 531 aaKnown RBP14.75□□□□□ -0.05
ITGB1-202ENST00000396033 SGSM2O43147 1006 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 TCIRG1Q13488 830 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 CWC27Q6UX04 472 aaKnown RBP14.74□□□□□ -0.05
ITGB1-202ENST00000396033 ISCA1Q9BUE6 129 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 TFCP2Q12800 502 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 EVI5LQ96CN4 794 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 SLC4A9Q96Q91 983 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 PALD1Q9ULE6 856 aa14.74□□□□□ -0.05
ITGB1-202ENST00000396033 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
ITGB1-202ENST00000396033 EPB41L2O43491 1005 aaKnown RBP14.73□□□□□ -0.05
ITGB1-202ENST00000396033 ANAPC15P60006 121 aa14.73□□□□□ -0.05
ITGB1-202ENST00000396033 CIZ1Q9ULV3 898 aaPredicted RBP14.73□□□□□ -0.05
ITGB1-202ENST00000396033 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
ITGB1-202ENST00000396033 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
ITGB1-202ENST00000396033 CYP19A1P11511 503 aaPredicted RBP14.73□□□□□ -0.05
ITGB1-202ENST00000396033 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
ITGB1-202ENST00000396033 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
ITGB1-202ENST00000396033 NWD2Q9ULI1 1742 aa14.72□□□□□ -0.05
ITGB1-202ENST00000396033 MAP3K15Q6ZN16 1313 aa14.72□□□□□ -0.05
ITGB1-202ENST00000396033 RAD50Q92878 1312 aa14.72□□□□□ -0.05
ITGB1-202ENST00000396033 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
ITGB1-202ENST00000396033 BOLA2Q9H3K6 86 aa14.72□□□□□ -0.05
ITGB1-202ENST00000396033 KIAA1211Q6ZU35 1233 aa14.72□□□□□ -0.05
ITGB1-202ENST00000396033 ZBTB1Q9Y2K1 713 aa14.71□□□□□ -0.05
ITGB1-202ENST00000396033 SLIT2O94813 1529 aa14.71□□□□□ -0.05
ITGB1-202ENST00000396033 NEK4P51957 841 aa14.71□□□□□ -0.05
ITGB1-202ENST00000396033 ACSBG1Q96GR2 724 aa14.71□□□□□ -0.06
ITGB1-202ENST00000396033 DBNLQ9UJU6 430 aaKnown RBP14.71□□□□□ -0.06
ITGB1-202ENST00000396033 UBAP1LF5GYI3 381 aa14.7□□□□□ -0.06
ITGB1-202ENST00000396033 LSG1Q9H089 658 aaKnown RBP14.7□□□□□ -0.06
ITGB1-202ENST00000396033 RRAGDQ9NQL2 400 aaPredicted RBP14.7□□□□□ -0.06
ITGB1-202ENST00000396033 HSPA4P34932 840 aa14.7□□□□□ -0.06
ITGB1-202ENST00000396033 TRIM28Q13263 835 aaKnown RBP14.7□□□□□ -0.06
ITGB1-202ENST00000396033 GIGYF2Q6Y7W6 1299 aaKnown RBP14.7□□□□□ -0.06
ITGB1-202ENST00000396033 MARCH10Q8NA82 808 aaPredicted RBP14.7□□□□□ -0.06
ITGB1-202ENST00000396033 HIP1O00291 1037 aa14.69□□□□□ -0.06
ITGB1-202ENST00000396033 FSD1Q9BTV5 496 aa14.69□□□□□ -0.06
ITGB1-202ENST00000396033 PCCAP05165 728 aaPredicted RBP14.69□□□□□ -0.06
ITGB1-202ENST00000396033 HLFQ16534 295 aa14.69□□□□□ -0.06
ITGB1-202ENST00000396033 BARGINQ6ZT62 677 aa14.69□□□□□ -0.06
ITGB1-202ENST00000396033 GPTP24298 496 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 MCM4P33991 863 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 FAM89AQ96GI7 184 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 DBNDD2Q9BQY9 259 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 ATG9AQ7Z3C6 839 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 IL17RAQ96F46 866 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 ZNF594Q96JF6 807 aaPredicted RBP14.68□□□□□ -0.06
ITGB1-202ENST00000396033 ATP5JP18859 108 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 IL15P40933 162 aaPredicted RBP14.68□□□□□ -0.06
ITGB1-202ENST00000396033 RAB3GAP1Q15042 981 aa14.68□□□□□ -0.06
ITGB1-202ENST00000396033 ZBTB38Q8NAP3 1195 aaPredicted RBP14.68□□□□□ -0.06
ITGB1-202ENST00000396033 EYA2O00167 538 aa14.67□□□□□ -0.06
ITGB1-202ENST00000396033 MCM2P49736 904 aa14.67□□□□□ -0.06
ITGB1-202ENST00000396033 NMIQ13287 307 aaPredicted RBP14.67□□□□□ -0.06
ITGB1-202ENST00000396033 CCDC57Q2TAC2 916 aa14.67□□□□□ -0.06
ITGB1-202ENST00000396033 IL6STP40189 918 aaPredicted RBP14.67□□□□□ -0.06
ITGB1-202ENST00000396033 TNPO1Q92973 898 aaKnown RBP14.67□□□□□ -0.06
ITGB1-202ENST00000396033 UPF3BQ9BZI7 483 aaKnown RBP14.67□□□□□ -0.06
ITGB1-202ENST00000396033 LRRC24Q50LG9 513 aa14.66□□□□□ -0.06
ITGB1-202ENST00000396033 DZIP3Q86Y13 1208 aaKnown RBP14.66□□□□□ -0.06
ITGB1-202ENST00000396033 FAM227BQ96M60 508 aa14.66□□□□□ -0.06
ITGB1-202ENST00000396033 C8orf37Q96NL8 207 aa14.66□□□□□ -0.06
ITGB1-202ENST00000396033 NLRP10Q86W26 655 aa14.66□□□□□ -0.06
ITGB1-202ENST00000396033 NEUROD6Q96NK8 337 aa14.66□□□□□ -0.06
ITGB1-202ENST00000396033 EDC3Q96F86 508 aaKnown RBP14.65□□□□□ -0.06
ITGB1-202ENST00000396033 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.06
ITGB1-202ENST00000396033 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 SNX14Q9Y5W7 946 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 ANKRD36CQ5JPF3 1778 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 CIAO1O76071 339 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 PTH1RQ03431 593 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 DNAJC2Q99543 621 aaKnown RBP14.65□□□□□ -0.06
ITGB1-202ENST00000396033 TBC1D2BQ9UPU7 963 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 NOL8Q76FK4 1167 aaKnown RBP14.65□□□□□ -0.06
ITGB1-202ENST00000396033 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
ITGB1-202ENST00000396033 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms