RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 AK2P54819 239 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 SAMD1Q6SPF0 538 aaPredicted RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 MPHOSPH8Q99549 860 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 PPLO60437 1756 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 SIGLEC1Q9BZZ2 1709 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 NMIQ13287 307 aaPredicted RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 IMMTQ16891 758 aaKnown RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 HSP90AB3PQ58FF7 597 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 DDX46Q7L014 1031 aaKnown RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 NEK1Q96PY6 1258 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 METTL22Q9BUU2 404 aaPredicted RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 TRIM5Q9C035 493 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 R3HCC1Q9Y3T6 440 aaKnown RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 ANKARQ7Z5J8 1434 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 USP31Q70CQ4 1352 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 TMEM131LA2VDJ0 1609 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 UBE2HP62256 183 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 SART3Q15020 963 aaKnown RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 STK38Q15208 465 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 NECAB1Q8N987 351 aa7.75□□□□□ -1.17
BDNF-203ENST00000395978 ZNF496Q96IT1 587 aaPredicted RBP7.75□□□□□ -1.17
BDNF-203ENST00000395978 IL15P40933 162 aaPredicted RBP7.74□□□□□ -1.17
BDNF-203ENST00000395978 SUCLG2Q96I99 432 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 RAD50Q92878 1312 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 IDH1O75874 414 aaKnown RBP7.74□□□□□ -1.17
BDNF-203ENST00000395978 CD2BP2O95400 341 aaKnown RBP7.74□□□□□ -1.17
BDNF-203ENST00000395978 CDK11BP21127 795 aaKnown RBP7.74□□□□□ -1.17
BDNF-203ENST00000395978 ME1P48163 572 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 HSPA2P54652 639 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 MAP3K11Q16584 847 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 VPS53Q5VIR6 699 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 LRSAM1Q6UWE0 723 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 TCEANC2Q96MN5 208 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 NAT10Q9H0A0 1025 aaKnown RBP7.74□□□□□ -1.17
BDNF-203ENST00000395978 HSPA4P34932 840 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 HMGN5P82970 282 aaKnown RBP7.74□□□□□ -1.17
BDNF-203ENST00000395978 GCKRQ14397 625 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 CREB3L3Q68CJ9 461 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 MPNDQ8N594 471 aa7.74□□□□□ -1.17
BDNF-203ENST00000395978 CCDC171Q6TFL3 1326 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 MCMDC2Q4G0Z9 681 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 USP48Q86UV5 1035 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 TRMT112Q9UI30 125 aaKnown RBP7.73□□□□□ -1.17
BDNF-203ENST00000395978 SNX14Q9Y5W7 946 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 IL2RBP14784 551 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 LDHAL6AQ6ZMR3 332 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 FBXW7Q969H0 707 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 NACAP1Q9BZK3 213 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 SNRKQ9NRH2 765 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 HOOK1Q9UJC3 728 aaKnown RBP7.73□□□□□ -1.17
BDNF-203ENST00000395978 CPS1P31327 1500 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 TECPR2O15040 1411 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 ADAMTS13Q76LX8 1427 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 C3P01024 1663 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 CD163L1Q9NR16 1453 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 EXOC5O00471 708 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 GPTP24298 496 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 PRIM1P49642 420 aaKnown RBP7.73□□□□□ -1.17
BDNF-203ENST00000395978 TFCP2Q12800 502 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 PLBD2Q8NHP8 589 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 KLHDC4Q8TBB5 520 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 TFIP11Q9UBB9 837 aaKnown RBP7.73□□□□□ -1.17
BDNF-203ENST00000395978 MYO3AQ8NEV4 1616 aa7.73□□□□□ -1.17
BDNF-203ENST00000395978 ANKRD18BA2A2Z9 1011 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 F13A1P00488 732 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 RRP12Q5JTH9 1297 aaKnown RBP7.72□□□□□ -1.17
BDNF-203ENST00000395978 PALD1Q9ULE6 856 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 CNPY2Q9Y2B0 182 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 TPM2P07951 284 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 CPA1P15085 419 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 SYT1P21579 422 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 RUFY3Q7L099 469 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 RASSF8Q8NHQ8 419 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 BRF1Q92994 677 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 GNL3LQ9NVN8 582 aaKnown RBP7.72□□□□□ -1.17
BDNF-203ENST00000395978 PHKG2P15735 406 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 JMYQ8N9B5 988 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 SPC24Q8NBT2 197 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 DDX17Q92841 729 aaKnown RBP7.72□□□□□ -1.17
BDNF-203ENST00000395978 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.72□□□□□ -1.17
BDNF-203ENST00000395978 OVOS2A0A0J9YW53 1432 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 OVOS2Q6IE36 1432 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 SSH2Q76I76 1423 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 CDC42BPGQ6DT37 1551 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 COL3A1P02461 1466 aaPredicted RBP7.72□□□□□ -1.17
BDNF-203ENST00000395978 KDRP35968 1356 aa7.72□□□□□ -1.17
BDNF-203ENST00000395978 NEURL1BA8MQ27 555 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 CDKL5O76039 1030 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 CLCN1P35523 988 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 CAMK4Q16566 473 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 PROSER3Q2NL68 480 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 UNC5CLQ8IV45 518 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 AIDAQ96BJ3 306 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 LMBRD1Q9NUN5 540 aa7.71□□□□□ -1.17
BDNF-203ENST00000395978 KDM4FA0A1W2PPD8 638 aa7.71□□□□□ -1.18
BDNF-203ENST00000395978 ZNF213O14771 459 aa7.71□□□□□ -1.18
BDNF-203ENST00000395978 KDM4AO75164 1064 aa7.71□□□□□ -1.18
BDNF-203ENST00000395978 FAM227BQ96M60 508 aa7.71□□□□□ -1.18
BDNF-203ENST00000395978 USP16Q9Y5T5 823 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms