RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
VCPKMT-202ENST00000395860 SRGAP3O43295 1099 aa25.43■■□□□ 1.66
VCPKMT-202ENST00000395860 MTX1Q13505 466 aa25.42■■□□□ 1.66
VCPKMT-202ENST00000395860 RTL5Q5HYW3 569 aaPredicted RBP25.42■■□□□ 1.66
VCPKMT-202ENST00000395860 SSH3Q8TE77 659 aa25.42■■□□□ 1.66
VCPKMT-202ENST00000395860 NARFQ9UHQ1 456 aa25.42■■□□□ 1.66
VCPKMT-202ENST00000395860 TRAPPC3LQ5T215 181 aa25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 CLEC4GQ6UXB4 293 aa25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 ZPR1O75312 459 aa25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 PHF14O94880 888 aa25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 POLA2Q14181 598 aa25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 AMIGO3Q86WK7 504 aa25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 ARHGEF1Q92888 912 aaKnown RBP25.41■■□□□ 1.66
VCPKMT-202ENST00000395860 UBN2Q6ZU65 1347 aa25.4■■□□□ 1.66
VCPKMT-202ENST00000395860 RGL2O15211 777 aa25.4■■□□□ 1.66
VCPKMT-202ENST00000395860 PCCAP05165 728 aaPredicted RBP25.4■■□□□ 1.66
VCPKMT-202ENST00000395860 ZBTB38Q8NAP3 1195 aaPredicted RBP25.4■■□□□ 1.66
VCPKMT-202ENST00000395860 NUCB1Q02818 461 aa25.39■■□□□ 1.66
VCPKMT-202ENST00000395860 EPHA10Q5JZY3 1008 aa25.39■■□□□ 1.66
VCPKMT-202ENST00000395860 ANKRD45Q5TZF3 282 aa25.39■■□□□ 1.66
VCPKMT-202ENST00000395860 ADRA2BP18089 450 aa25.39■■□□□ 1.65
VCPKMT-202ENST00000395860 RFC4P35249 363 aa25.39■■□□□ 1.65
VCPKMT-202ENST00000395860 RGS3P49796 1198 aa25.39■■□□□ 1.65
VCPKMT-202ENST00000395860 USPL1Q5W0Q7 1092 aa25.39■■□□□ 1.65
VCPKMT-202ENST00000395860 NIP7Q9Y221 180 aaKnown RBP eCLIP25.39■■□□□ 1.65
VCPKMT-202ENST00000395860 PARP10Q53GL7 1025 aa25.38■■□□□ 1.65
VCPKMT-202ENST00000395860 FAM89AQ96GI7 184 aa25.38■■□□□ 1.65
VCPKMT-202ENST00000395860 TRMT112Q9UI30 125 aaKnown RBP25.38■■□□□ 1.65
VCPKMT-202ENST00000395860 CHD1LQ86WJ1 897 aa25.37■■□□□ 1.65
VCPKMT-202ENST00000395860 SRP68Q9UHB9 627 aaKnown RBP25.37■■□□□ 1.65
VCPKMT-202ENST00000395860 MYH3P11055 1940 aa25.37■■□□□ 1.65
VCPKMT-202ENST00000395860 ZBTB47Q9UFB7 747 aaPredicted RBP25.36■■□□□ 1.65
VCPKMT-202ENST00000395860 EXOC6BQ9Y2D4 811 aa25.36■■□□□ 1.65
VCPKMT-202ENST00000395860 CDHR2Q9BYE9 1310 aa25.36■■□□□ 1.65
VCPKMT-202ENST00000395860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.36■■□□□ 1.65
VCPKMT-202ENST00000395860 RABL6Q3YEC7 729 aaPredicted RBP25.36■■□□□ 1.65
VCPKMT-202ENST00000395860 SSFA2P28290 1259 aa25.35■■□□□ 1.65
VCPKMT-202ENST00000395860 SF3B2Q13435 895 aaKnown RBP25.35■■□□□ 1.65
VCPKMT-202ENST00000395860 SUSD4Q5VX71 490 aa25.35■■□□□ 1.65
VCPKMT-202ENST00000395860 LNPKQ9C0E8 428 aa25.35■■□□□ 1.65
VCPKMT-202ENST00000395860 BCL2L12Q9HB09 334 aa25.35■■□□□ 1.65
VCPKMT-202ENST00000395860 USP42Q9H9J4 1324 aaKnown RBP25.35■■□□□ 1.65
VCPKMT-202ENST00000395860 APBB1O00213 710 aa25.34■■□□□ 1.65
VCPKMT-202ENST00000395860 FOXO4P98177 505 aa25.34■■□□□ 1.65
VCPKMT-202ENST00000395860 TUBGCP6Q96RT7 1819 aa25.34■■□□□ 1.65
VCPKMT-202ENST00000395860 SURF6O75683 361 aaKnown RBP25.33■■□□□ 1.65
VCPKMT-202ENST00000395860 UTP14AQ9BVJ6 771 aaKnown RBP25.33■■□□□ 1.65
VCPKMT-202ENST00000395860 FAM177BA6PVY3 158 aa25.33■■□□□ 1.65
VCPKMT-202ENST00000395860 LMBR1LQ6UX01 489 aa25.33■■□□□ 1.65
VCPKMT-202ENST00000395860 EN1Q05925 392 aaPredicted RBP25.32■■□□□ 1.64
VCPKMT-202ENST00000395860 TBC1D9BQ66K14 1250 aa25.32■■□□□ 1.64
VCPKMT-202ENST00000395860 PLA2G12BQ9BX93 195 aa25.32■■□□□ 1.64
VCPKMT-202ENST00000395860 CHMP3Q9Y3E7 222 aa25.32■■□□□ 1.64
VCPKMT-202ENST00000395860 COL24A1Q17RW2 1714 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 IRS4O14654 1257 aaPredicted RBP25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 BICDL1Q6ZP65 573 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 TFCP2L1Q9NZI6 479 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 SH3TC1Q8TE82 1336 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 LAMB2P55268 1798 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 EZH2Q15910 746 aaKnown RBP25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 ZNF827Q17R98 1081 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 HSP90AB4PQ58FF6 505 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 AKT1S1Q96B36 256 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 CAMKK2Q96RR4 588 aa25.31■■□□□ 1.64
VCPKMT-202ENST00000395860 RAB11FIP3O75154 756 aa25.3■■□□□ 1.64
VCPKMT-202ENST00000395860 BAG6P46379 1132 aa25.3■■□□□ 1.64
VCPKMT-202ENST00000395860 NOP58Q9Y2X3 529 aaKnown RBP25.3■■□□□ 1.64
VCPKMT-202ENST00000395860 DDX60Q8IY21 1712 aaKnown RBP25.3■■□□□ 1.64
VCPKMT-202ENST00000395860 NTSR2O95665 410 aa25.29■■□□□ 1.64
VCPKMT-202ENST00000395860 PDE4AP27815 886 aa25.29■■□□□ 1.64
VCPKMT-202ENST00000395860 SETDB2Q96T68 719 aa25.29■■□□□ 1.64
VCPKMT-202ENST00000395860 LRRCC1Q9C099 1032 aa25.29■■□□□ 1.64
VCPKMT-202ENST00000395860 PA2G4Q9UQ80 394 aaKnown RBP25.29■■□□□ 1.64
VCPKMT-202ENST00000395860 OS9Q13438 667 aaPredicted RBP25.28■■□□□ 1.64
VCPKMT-202ENST00000395860 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
VCPKMT-202ENST00000395860 SMARCA5O60264 1052 aaPredicted RBP25.28■■□□□ 1.64
VCPKMT-202ENST00000395860 PDE8AO60658 829 aa25.27■■□□□ 1.64
VCPKMT-202ENST00000395860 RFX5P48382 616 aaPredicted RBP25.26■■□□□ 1.63
VCPKMT-202ENST00000395860 HSP90B1P14625 803 aaKnown RBP25.26■■□□□ 1.63
VCPKMT-202ENST00000395860 KLHDC4Q8TBB5 520 aa25.26■■□□□ 1.63
VCPKMT-202ENST00000395860 COPRSQ9NQ92 184 aa25.26■■□□□ 1.63
VCPKMT-202ENST00000395860 CSF1RP07333 972 aa25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 CTSWP56202 376 aa25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 G3BP1Q13283 466 aaKnown RBP eCLIP25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 NUTM1Q86Y26 1132 aa25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 KIF1BPQ96EK5 621 aa25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 NYXQ9GZU5 481 aa25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 CASZ1Q86V15 1759 aa25.25■■□□□ 1.63
VCPKMT-202ENST00000395860 PTPN12Q05209 780 aaKnown RBP25.24■■□□□ 1.63
VCPKMT-202ENST00000395860 ERC1Q8IUD2 1116 aa25.24■■□□□ 1.63
VCPKMT-202ENST00000395860 FLAD1Q8NFF5 587 aa25.24■■□□□ 1.63
VCPKMT-202ENST00000395860 RHPN1Q8TCX5 695 aa25.24■■□□□ 1.63
VCPKMT-202ENST00000395860 SIL1Q9H173 461 aa25.24■■□□□ 1.63
VCPKMT-202ENST00000395860 GYS1P13807 737 aa25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 HCLS1P14317 486 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 GTF2E1P29083 439 aaPredicted RBP25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 DEFB132Q7Z7B7 95 aa25.23■■□□□ 1.63
VCPKMT-202ENST00000395860 NBPF5PQ86XG9 351 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms