RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 GTF2E1P29083 439 aaPredicted RBP21.13■□□□□ 0.97
CXCL12-206ENST00000395795 FKBP4Q02790 459 aaKnown RBP eCLIP21.13■□□□□ 0.97
CXCL12-206ENST00000395795 PARP10Q53GL7 1025 aa21.13■□□□□ 0.97
CXCL12-206ENST00000395795 NLRP10Q86W26 655 aa21.13■□□□□ 0.97
CXCL12-206ENST00000395795 SYNE4Q8N205 404 aa21.13■□□□□ 0.97
CXCL12-206ENST00000395795 ANKRD36CQ5JPF3 1778 aa21.13■□□□□ 0.97
CXCL12-206ENST00000395795 COL4A5P29400 1685 aa21.12■□□□□ 0.97
CXCL12-206ENST00000395795 VEGFAP15692 232 aaPredicted RBP21.12■□□□□ 0.97
CXCL12-206ENST00000395795 ALDH1B1P30837 517 aa21.12■□□□□ 0.97
CXCL12-206ENST00000395795 FSTL1Q12841 308 aa21.12■□□□□ 0.97
CXCL12-206ENST00000395795 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
CXCL12-206ENST00000395795 DUSP27Q5VZP5 1158 aa21.12■□□□□ 0.97
CXCL12-206ENST00000395795 ZNF277Q9NRM2 450 aaPredicted RBP21.12■□□□□ 0.97
CXCL12-206ENST00000395795 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
CXCL12-206ENST00000395795 DDNO94850 711 aaPredicted RBP21.1■□□□□ 0.97
CXCL12-206ENST00000395795 ZEB1P37275 1124 aaPredicted RBP21.1■□□□□ 0.97
CXCL12-206ENST00000395795 APLP1P51693 650 aa21.1■□□□□ 0.97
CXCL12-206ENST00000395795 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
CXCL12-206ENST00000395795 CRAMP1Q96RY5 1269 aa21.1■□□□□ 0.97
CXCL12-206ENST00000395795 UTP14AQ9BVJ6 771 aaKnown RBP21.1■□□□□ 0.97
CXCL12-206ENST00000395795 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
CXCL12-206ENST00000395795 PPP1R42Q7Z4L9 355 aa21.09■□□□□ 0.97
CXCL12-206ENST00000395795 RTKN2Q8IZC4 609 aa21.09■□□□□ 0.97
CXCL12-206ENST00000395795 ZNF541Q9H0D2 1346 aa21.08■□□□□ 0.97
CXCL12-206ENST00000395795 HTRA3P83110 453 aa21.08■□□□□ 0.97
CXCL12-206ENST00000395795 ISCA1Q9BUE6 129 aa21.08■□□□□ 0.97
CXCL12-206ENST00000395795 LAMB2P55268 1798 aa21.08■□□□□ 0.96
CXCL12-206ENST00000395795 DPY19L2Q6NUT2 758 aa21.07■□□□□ 0.96
CXCL12-206ENST00000395795 C16orf71Q8IYS4 520 aaPredicted RBP21.07■□□□□ 0.96
CXCL12-206ENST00000395795 C8orf58Q8NAV2 365 aa21.07■□□□□ 0.96
CXCL12-206ENST00000395795 PLBD2Q8NHP8 589 aa21.07■□□□□ 0.96
CXCL12-206ENST00000395795 PSMD1Q99460 953 aa21.07■□□□□ 0.96
CXCL12-206ENST00000395795 DBF4Q9UBU7 674 aaPredicted RBP21.07■□□□□ 0.96
CXCL12-206ENST00000395795 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
CXCL12-206ENST00000395795 POTEIP0CG38 1075 aa21.06■□□□□ 0.96
CXCL12-206ENST00000395795 POTEJP0CG39 1038 aa21.06■□□□□ 0.96
CXCL12-206ENST00000395795 HSP90AB3PQ58FF7 597 aa21.06■□□□□ 0.96
CXCL12-206ENST00000395795 SMC1BQ8NDV3 1235 aa21.06■□□□□ 0.96
CXCL12-206ENST00000395795 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
CXCL12-206ENST00000395795 L3MBTL3Q96JM7 780 aaPredicted RBP21.06■□□□□ 0.96
CXCL12-206ENST00000395795 FZD9O00144 591 aa21.05■□□□□ 0.96
CXCL12-206ENST00000395795 HCLS1P14317 486 aaPredicted RBP21.05■□□□□ 0.96
CXCL12-206ENST00000395795 IARSP41252 1262 aaKnown RBP21.05■□□□□ 0.96
CXCL12-206ENST00000395795 GNAI1P63096 354 aa21.05■□□□□ 0.96
CXCL12-206ENST00000395795 ANKRD13DQ6ZTN6 518 aa21.05■□□□□ 0.96
CXCL12-206ENST00000395795 ABCC4O15439 1325 aa21.04■□□□□ 0.96
CXCL12-206ENST00000395795 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
CXCL12-206ENST00000395795 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
CXCL12-206ENST00000395795 ZNF428Q96B54 188 aa21.04■□□□□ 0.96
CXCL12-206ENST00000395795 RBM17Q96I25 401 aaKnown RBP21.04■□□□□ 0.96
CXCL12-206ENST00000395795 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
CXCL12-206ENST00000395795 COL4A1P02462 1669 aa21.04■□□□□ 0.96
CXCL12-206ENST00000395795 ELL2O00472 640 aaPredicted RBP21.03■□□□□ 0.96
CXCL12-206ENST00000395795 TSPYL6Q8N831 410 aa21.03■□□□□ 0.96
CXCL12-206ENST00000395795 PHAXQ9H814 394 aaKnown RBP21.03■□□□□ 0.96
CXCL12-206ENST00000395795 HYPKQ9NX55 129 aa21.03■□□□□ 0.96
CXCL12-206ENST00000395795 DDX60Q8IY21 1712 aaKnown RBP21.02■□□□□ 0.96
CXCL12-206ENST00000395795 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
CXCL12-206ENST00000395795 CCDC27Q2M243 656 aa21.02■□□□□ 0.96
CXCL12-206ENST00000395795 TRMT112Q9UI30 125 aaKnown RBP21.02■□□□□ 0.96
CXCL12-206ENST00000395795 ATP6V0A2Q9Y487 856 aa21.02■□□□□ 0.96
CXCL12-206ENST00000395795 SH3TC1Q8TE82 1336 aa21.02■□□□□ 0.95
CXCL12-206ENST00000395795 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
CXCL12-206ENST00000395795 TRIM28Q13263 835 aaKnown RBP21.01■□□□□ 0.95
CXCL12-206ENST00000395795 WWC1Q8IX03 1113 aa21.01■□□□□ 0.95
CXCL12-206ENST00000395795 CALD1Q05682 793 aaKnown RBP21■□□□□ 0.95
CXCL12-206ENST00000395795 TAF1P21675 1872 aa20.99■□□□□ 0.95
CXCL12-206ENST00000395795 TCERG1O14776 1098 aaKnown RBP20.99■□□□□ 0.95
CXCL12-206ENST00000395795 RTFDC1Q9BY42 306 aaPredicted RBP20.99■□□□□ 0.95
CXCL12-206ENST00000395795 TAF1DQ9H5J8 278 aaPredicted RBP20.99■□□□□ 0.95
CXCL12-206ENST00000395795 ADAMTSL1Q8N6G6 1762 aa20.99■□□□□ 0.95
CXCL12-206ENST00000395795 SCN4AP35499 1836 aa20.99■□□□□ 0.95
CXCL12-206ENST00000395795 GRIPAP1Q4V328 841 aa20.98■□□□□ 0.95
CXCL12-206ENST00000395795 NCBP3Q53F19 620 aaKnown RBP20.98■□□□□ 0.95
CXCL12-206ENST00000395795 TSR2Q969E8 191 aaKnown RBP20.98■□□□□ 0.95
CXCL12-206ENST00000395795 FAM89AQ96GI7 184 aa20.98■□□□□ 0.95
CXCL12-206ENST00000395795 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
CXCL12-206ENST00000395795 DUOX1Q9NRD9 1551 aa20.97■□□□□ 0.95
CXCL12-206ENST00000395795 SF3B3Q15393 1217 aaKnown RBP20.97■□□□□ 0.95
CXCL12-206ENST00000395795 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
CXCL12-206ENST00000395795 BBOX1O75936 387 aa20.96■□□□□ 0.95
CXCL12-206ENST00000395795 SP8Q8IXZ3 490 aa20.96■□□□□ 0.95
CXCL12-206ENST00000395795 MRS2Q9HD23 443 aa20.96■□□□□ 0.95
CXCL12-206ENST00000395795 LRRC37AA6NMS7 1700 aa20.95■□□□□ 0.94
CXCL12-206ENST00000395795 GRAPQ13588 217 aa20.95■□□□□ 0.94
CXCL12-206ENST00000395795 CHADLQ6NUI6 762 aa20.95■□□□□ 0.94
CXCL12-206ENST00000395795 JMYQ8N9B5 988 aa20.95■□□□□ 0.94
CXCL12-206ENST00000395795 GRAPLQ8TC17 118 aaPredicted RBP20.95■□□□□ 0.94
CXCL12-206ENST00000395795 GPC2Q8N158 579 aa20.94■□□□□ 0.94
CXCL12-206ENST00000395795 CELF1Q92879 486 aaKnown RBP20.94■□□□□ 0.94
CXCL12-206ENST00000395795 IQCA1LA6NCM1 817 aa20.93■□□□□ 0.94
CXCL12-206ENST00000395795 AOC3Q16853 763 aa20.93■□□□□ 0.94
CXCL12-206ENST00000395795 IL16Q14005 1332 aa20.93■□□□□ 0.94
CXCL12-206ENST00000395795 PASKQ96RG2 1323 aa20.93■□□□□ 0.94
CXCL12-206ENST00000395795 ITGBL1O95965 494 aaPredicted RBP20.92■□□□□ 0.94
CXCL12-206ENST00000395795 SCNN1DP51172 638 aa20.92■□□□□ 0.94
CXCL12-206ENST00000395795 RTL5Q5HYW3 569 aaPredicted RBP20.92■□□□□ 0.94
CXCL12-206ENST00000395795 CCDC30Q5VVM6 783 aa20.92■□□□□ 0.94
CXCL12-206ENST00000395795 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
CXCL12-206ENST00000395795 LARGE2Q8N3Y3 721 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms