RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-202ENST00000394888 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
CPSF7-202ENST00000394888 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
CPSF7-202ENST00000394888 COL16A1Q07092 1604 aaPredicted RBP18.66■□□□□ 0.58
CPSF7-202ENST00000394888 SOS2Q07890 1332 aaPredicted RBP18.66■□□□□ 0.58
CPSF7-202ENST00000394888 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
CPSF7-202ENST00000394888 PPP1R9BQ96SB3 815 aa18.66■□□□□ 0.58
CPSF7-202ENST00000394888 LARP6Q9BRS8 491 aaKnown RBP18.66■□□□□ 0.58
CPSF7-202ENST00000394888 PRPF40AO75400 957 aaKnown RBP18.66■□□□□ 0.58
CPSF7-202ENST00000394888 DDX49Q9Y6V7 483 aaKnown RBP18.66■□□□□ 0.58
CPSF7-202ENST00000394888 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
CPSF7-202ENST00000394888 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
CPSF7-202ENST00000394888 AACSQ86V21 672 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 ZSWIM6Q9HCJ5 1215 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 DTNBO60941 627 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 ATF3P18847 181 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 FOXO4P98177 505 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 MYD88Q99836 296 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 SPEF2Q9C093 1822 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 MAP4K1Q92918 833 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 MYH7P12883 1935 aa18.65■□□□□ 0.58
CPSF7-202ENST00000394888 LARP1Q6PKG0 1096 aaKnown RBP18.64■□□□□ 0.58
CPSF7-202ENST00000394888 CCDC8Q9H0W5 538 aaPredicted RBP18.64■□□□□ 0.58
CPSF7-202ENST00000394888 DBNLQ9UJU6 430 aaKnown RBP18.64■□□□□ 0.58
CPSF7-202ENST00000394888 CAVIN1Q6NZI2 390 aaKnown RBP18.64■□□□□ 0.57
CPSF7-202ENST00000394888 ZNF589Q86UQ0 364 aaPredicted RBP18.64■□□□□ 0.57
CPSF7-202ENST00000394888 CLASRPQ8N2M8 674 aaKnown RBP18.64■□□□□ 0.57
CPSF7-202ENST00000394888 EDC3Q96F86 508 aaKnown RBP18.64■□□□□ 0.57
CPSF7-202ENST00000394888 ZNF609O15014 1411 aa18.64■□□□□ 0.57
CPSF7-202ENST00000394888 AKAP11Q9UKA4 1901 aa18.64■□□□□ 0.57
CPSF7-202ENST00000394888 CCDC171Q6TFL3 1326 aa18.64■□□□□ 0.57
CPSF7-202ENST00000394888 SNRPA1P09661 255 aaKnown RBP18.64■□□□□ 0.57
CPSF7-202ENST00000394888 NMIQ13287 307 aaPredicted RBP18.64■□□□□ 0.57
CPSF7-202ENST00000394888 MYH3P11055 1940 aa18.64■□□□□ 0.57
CPSF7-202ENST00000394888 WDR17Q8IZU2 1322 aa18.64■□□□□ 0.57
CPSF7-202ENST00000394888 HSPA2P54652 639 aa18.63■□□□□ 0.57
CPSF7-202ENST00000394888 NKX1-1Q15270 411 aaPredicted RBP18.63■□□□□ 0.57
CPSF7-202ENST00000394888 GADD45BO75293 160 aaPredicted RBP18.63■□□□□ 0.57
CPSF7-202ENST00000394888 EVI5LQ96CN4 794 aa18.63■□□□□ 0.57
CPSF7-202ENST00000394888 CASZ1Q86V15 1759 aa18.63■□□□□ 0.57
CPSF7-202ENST00000394888 SLIT2O94813 1529 aa18.63■□□□□ 0.57
CPSF7-202ENST00000394888 PRIM1P49642 420 aaKnown RBP18.63■□□□□ 0.57
CPSF7-202ENST00000394888 ANKRD13DQ6ZTN6 518 aa18.63■□□□□ 0.57
CPSF7-202ENST00000394888 ERC1Q8IUD2 1116 aa18.63■□□□□ 0.57
CPSF7-202ENST00000394888 MCCP23508 829 aa18.62■□□□□ 0.57
CPSF7-202ENST00000394888 FOXD4L5Q5VV16 416 aaPredicted RBP18.62■□□□□ 0.57
CPSF7-202ENST00000394888 FOXD4L4Q8WXT5 416 aaPredicted RBP18.62■□□□□ 0.57
CPSF7-202ENST00000394888 CADPS2Q86UW7 1296 aa18.62■□□□□ 0.57
CPSF7-202ENST00000394888 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
CPSF7-202ENST00000394888 SIL1Q9H173 461 aa18.62■□□□□ 0.57
CPSF7-202ENST00000394888 LRP6O75581 1613 aa18.61■□□□□ 0.57
CPSF7-202ENST00000394888 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
CPSF7-202ENST00000394888 TM6SF1Q9BZW5 370 aa18.61■□□□□ 0.57
CPSF7-202ENST00000394888 ATG9AQ7Z3C6 839 aa18.61■□□□□ 0.57
CPSF7-202ENST00000394888 DDX58O95786 925 aaKnown RBP18.6■□□□□ 0.57
CPSF7-202ENST00000394888 PDLIM2Q96JY6 352 aa18.6■□□□□ 0.57
CPSF7-202ENST00000394888 NUP98P52948 1817 aa18.6■□□□□ 0.57
CPSF7-202ENST00000394888 USPL1Q5W0Q7 1092 aa18.6■□□□□ 0.57
CPSF7-202ENST00000394888 H7C1W4 665 aa18.6■□□□□ 0.57
CPSF7-202ENST00000394888 FMNL2Q96PY5 1086 aa18.6■□□□□ 0.57
CPSF7-202ENST00000394888 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.6■□□□□ 0.57
CPSF7-202ENST00000394888 NDUFB9Q9Y6M9 179 aa18.6■□□□□ 0.57
CPSF7-202ENST00000394888 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
CPSF7-202ENST00000394888 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
CPSF7-202ENST00000394888 TTLL7Q6ZT98 887 aa18.59■□□□□ 0.57
CPSF7-202ENST00000394888 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
CPSF7-202ENST00000394888 ARAP2Q8WZ64 1704 aa18.59■□□□□ 0.57
CPSF7-202ENST00000394888 TFCP2Q12800 502 aa18.59■□□□□ 0.57
CPSF7-202ENST00000394888 ME3Q16798 604 aa18.59■□□□□ 0.57
CPSF7-202ENST00000394888 CREB3L3Q68CJ9 461 aa18.59■□□□□ 0.57
CPSF7-202ENST00000394888 RBM8AQ9Y5S9 174 aaKnown RBP18.59■□□□□ 0.57
CPSF7-202ENST00000394888 SLC27A2O14975 620 aa18.58■□□□□ 0.57
CPSF7-202ENST00000394888 VPS53Q5VIR6 699 aa18.58■□□□□ 0.57
CPSF7-202ENST00000394888 TPCN1Q9ULQ1 816 aa18.58■□□□□ 0.57
CPSF7-202ENST00000394888 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.57
CPSF7-202ENST00000394888 RREB1Q92766 1687 aa18.58■□□□□ 0.57
CPSF7-202ENST00000394888 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
CPSF7-202ENST00000394888 IFIT2P09913 472 aaKnown RBP18.58■□□□□ 0.56
CPSF7-202ENST00000394888 TNNI3KQ59H18 835 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 PLBD2Q8NHP8 589 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 FPGT-TNNI3KV9GXZ4 949 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 CLCN1P35523 988 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 GDPD2Q9HCC8 539 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 LIMCH1Q9UPQ0 1083 aa18.58■□□□□ 0.56
CPSF7-202ENST00000394888 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
CPSF7-202ENST00000394888 SYT1P21579 422 aa18.57■□□□□ 0.56
CPSF7-202ENST00000394888 TOB2Q14106 344 aaPredicted RBP18.57■□□□□ 0.56
CPSF7-202ENST00000394888 UBE3BQ7Z3V4 1068 aa18.57■□□□□ 0.56
CPSF7-202ENST00000394888 BOLA2Q9H3K6 86 aa18.57■□□□□ 0.56
CPSF7-202ENST00000394888 LRP5O75197 1615 aa18.57■□□□□ 0.56
CPSF7-202ENST00000394888 ATP5JP18859 108 aa18.56■□□□□ 0.56
CPSF7-202ENST00000394888 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
CPSF7-202ENST00000394888 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
CPSF7-202ENST00000394888 ECM29Q5VYK3 1845 aa18.56■□□□□ 0.56
CPSF7-202ENST00000394888 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
CPSF7-202ENST00000394888 RFX7Q2KHR2 1363 aa18.56■□□□□ 0.56
CPSF7-202ENST00000394888 PHLPP1O60346 1717 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms