RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 MYD88Q99836 296 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 PRDM11Q9NQV5 511 aa8.7□□□□□ -1.02
SMAD1-202ENST00000394092 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-202ENST00000394092 ERVV-2B6SEH9 535 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 IGKV5-2P06315 115 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 COPS6Q7L5N1 327 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 GZF1Q9H116 711 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-202ENST00000394092 BRPF3Q9ULD4 1205 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 PLBD2Q8NHP8 589 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 ZCRB1Q8TBF4 217 aaKnown RBP8.69□□□□□ -1.02
SMAD1-202ENST00000394092 LSG1Q9H089 658 aaKnown RBP8.69□□□□□ -1.02
SMAD1-202ENST00000394092 PALD1Q9ULE6 856 aa8.69□□□□□ -1.02
SMAD1-202ENST00000394092 DDX49Q9Y6V7 483 aaKnown RBP8.69□□□□□ -1.02
SMAD1-202ENST00000394092 RFX7Q2KHR2 1363 aa8.68□□□□□ -1.02
SMAD1-202ENST00000394092 TJP1Q07157 1748 aa8.68□□□□□ -1.02
SMAD1-202ENST00000394092 MAP4K4O95819 1239 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-202ENST00000394092 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
SMAD1-202ENST00000394092 CWC27Q6UX04 472 aaKnown RBP8.68□□□□□ -1.02
SMAD1-202ENST00000394092 ZGPATQ8N5A5 531 aaKnown RBP8.68□□□□□ -1.02
SMAD1-202ENST00000394092 COPRSQ9NQ92 184 aa8.68□□□□□ -1.02
SMAD1-202ENST00000394092 PA2G4Q9UQ80 394 aaKnown RBP8.68□□□□□ -1.02
SMAD1-202ENST00000394092 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 IL2RBP14784 551 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 HSPA2P54652 639 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 MCTP1Q6DN14 999 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 LRP10Q7Z4F1 713 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 KAZALD1Q96I82 304 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 CARD10Q9BWT7 1032 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 GRPEL1Q9HAV7 217 aa8.67□□□□□ -1.02
SMAD1-202ENST00000394092 TNS2Q63HR2 1409 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 SASH1O94885 1247 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 ZKSCAN1P17029 563 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-202ENST00000394092 NKX1-1Q15270 411 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-202ENST00000394092 RABL6Q3YEC7 729 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-202ENST00000394092 TM6SF1Q9BZW5 370 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 SLAIN2Q9P270 581 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-202ENST00000394092 USP16Q9Y5T5 823 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 SNX14Q9Y5W7 946 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 PLCH1Q4KWH8 1693 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 TOGARAM1Q9Y4F4 1720 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 CCDC171Q6TFL3 1326 aa8.66□□□□□ -1.02
SMAD1-202ENST00000394092 WDR33Q9C0J8 1336 aaKnown RBP8.66□□□□□ -1.02
SMAD1-202ENST00000394092 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
SMAD1-202ENST00000394092 BRD1O95696 1058 aa8.65□□□□□ -1.02
SMAD1-202ENST00000394092 MBD3O95983 291 aa8.65□□□□□ -1.02
SMAD1-202ENST00000394092 XRCC6P12956 609 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMAD1-202ENST00000394092 RNF20Q5VTR2 975 aa8.65□□□□□ -1.02
SMAD1-202ENST00000394092 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
SMAD1-202ENST00000394092 EAF2Q96CJ1 260 aaPredicted RBP8.65□□□□□ -1.02
SMAD1-202ENST00000394092 UPF3BQ9BZI7 483 aaKnown RBP8.65□□□□□ -1.02
SMAD1-202ENST00000394092 IL25Q9H293 177 aa8.65□□□□□ -1.02
SMAD1-202ENST00000394092 WNK3Q9BYP7 1800 aa8.65□□□□□ -1.02
SMAD1-202ENST00000394092 LRP6O75581 1613 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 A0A087WZG4 1122 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 POTEMA6NI47 508 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.03
SMAD1-202ENST00000394092 PSMA5P28066 241 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 UBE3BQ7Z3V4 1068 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 TICAM2Q86XR7 235 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 ANP32BQ92688 251 aaKnown RBP8.65□□□□□ -1.03
SMAD1-202ENST00000394092 KCNB2Q92953 911 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 ZSCAN31Q96LW9 406 aaPredicted RBP8.65□□□□□ -1.03
SMAD1-202ENST00000394092 FSD1Q9BTV5 496 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 SIL1Q9H173 461 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 SH2B1Q9NRF2 756 aaPredicted RBP8.65□□□□□ -1.03
SMAD1-202ENST00000394092 SNRKQ9NRH2 765 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 LMBRD1Q9NUN5 540 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 LIMCH1Q9UPQ0 1083 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 ITGB4P16144 1822 aa8.65□□□□□ -1.03
SMAD1-202ENST00000394092 KCNJ4P48050 445 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 MKRN4PQ13434 485 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-202ENST00000394092 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 VPS53Q5VIR6 699 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 TTC14Q96N46 770 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 ARXQ96QS3 562 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 CCDC8Q9H0W5 538 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-202ENST00000394092 CWC25Q9NXE8 425 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-202ENST00000394092 HMG20BQ9P0W2 317 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-202ENST00000394092 CYP46A1Q9Y6A2 500 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 FPGT-TNNI3KV9GXZ4 949 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 ANKRD36CQ5JPF3 1778 aa8.64□□□□□ -1.03
SMAD1-202ENST00000394092 JCADQ9P266 1359 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 MED23Q9ULK4 1368 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 ATP5JP18859 108 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 NCLP19338 710 aaKnown RBP8.63□□□□□ -1.03
SMAD1-202ENST00000394092 CASTP20810 708 aaKnown RBP8.63□□□□□ -1.03
SMAD1-202ENST00000394092 RFX5P48382 616 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-202ENST00000394092 AK2P54819 239 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 EVA1CP58658 441 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 ZNF445P59923 1031 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
SMAD1-202ENST00000394092 PKP1Q13835 747 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 NOL8Q76FK4 1167 aaKnown RBP8.63□□□□□ -1.03
SMAD1-202ENST00000394092 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
SMAD1-202ENST00000394092 SYAP1Q96A49 352 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-202ENST00000394092 TEX13AQ9BXU3 409 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms