RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-204ENST00000394083 MED23Q9ULK4 1368 aa10.53□□□□□ -0.72
GAPVD1-204ENST00000394083 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
GAPVD1-204ENST00000394083 ESYT1Q9BSJ8 1104 aa10.53□□□□□ -0.72
GAPVD1-204ENST00000394083 PUS3Q9BZE2 481 aaKnown RBP10.52□□□□□ -0.72
GAPVD1-204ENST00000394083 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.72
GAPVD1-204ENST00000394083 MX1P20591 662 aa10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 SCARF1Q14162 830 aa10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 PLEKHO1Q53GL0 409 aaPredicted RBP10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 DCAF5Q96JK2 942 aa10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 SRGAP3O43295 1099 aa10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 KCNQ4P56696 695 aa10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.73
GAPVD1-204ENST00000394083 KIAA1551Q9HCM1 1747 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 SMIM22K7EJ46 135 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 KCNQ2O43526 872 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 MARCH10Q8NA82 808 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 SEC62Q99442 399 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 BTG4Q9NY30 223 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 A0A0D9SFI3 127 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 SNAP23O00161 211 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 KCNB2Q92953 911 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 DLEC1Q9Y238 1755 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 GRM8O00222 908 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 LRRC24Q50LG9 513 aa10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 TNPO1Q92973 898 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 ZNF594Q96JF6 807 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-204ENST00000394083 H7C1W4 665 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 FOXD4L1Q9NU39 408 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 FSD2A1L4K1 749 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 VGLL2Q8N8G2 317 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 DDX60LQ5H9U9 1706 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 SSFA2P28290 1259 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 ITPK1Q13572 414 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 RAB3GAP1Q15042 981 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 CLEC17AQ6ZS10 378 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 IFNL2Q8IZJ0 200 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 MYH2Q9UKX2 1941 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 PANK2Q9BZ23 570 aa10.5□□□□□ -0.73
GAPVD1-204ENST00000394083 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 LINS1Q8NG48 757 aa10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 NBPF3Q9H094 633 aa10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 BRPF3Q9ULD4 1205 aa10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 CDH23Q9H251 3354 aa10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 LRRCC1Q9C099 1032 aa10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 USP35Q9P2H5 1018 aa10.49□□□□□ -0.73
GAPVD1-204ENST00000394083 SGSM2O43147 1006 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 PI16Q6UXB8 463 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 COL11A2P13942 1736 aaPredicted RBP10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 FOCADQ5VW36 1801 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 STOX1Q6ZVD7 989 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 NECTIN1Q15223 517 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 DDX54Q8TDD1 881 aaKnown RBP10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 ISCA1Q9BUE6 129 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 SPG7Q9UQ90 795 aa10.48□□□□□ -0.73
GAPVD1-204ENST00000394083 CDC45O75419 566 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 HSPA4P34932 840 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 VPS53Q5VIR6 699 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 RUFY3Q7L099 469 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 DNAJC10Q8IXB1 793 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 MYD88Q99836 296 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 NRXN2Q9P2S2 1712 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 CYP19A1P11511 503 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 TEFQ10587 303 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 UBTFL1P0CB47 393 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 EVX2Q03828 476 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 ZCRB1Q8TBF4 217 aaKnown RBP10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 GPT2Q8TD30 523 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 SNX14Q9Y5W7 946 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 SPATA31A1Q5TZJ5 1347 aa10.47□□□□□ -0.73
GAPVD1-204ENST00000394083 ZNF384Q8TF68 577 aa10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 CCDC8Q9H0W5 538 aaPredicted RBP10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 SIL1Q9H173 461 aa10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 STRN4Q9NRL3 753 aa10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 SURF6O75683 361 aaKnown RBP10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 CUL4AQ13619 759 aa10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 UBE3BQ7Z3V4 1068 aa10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 UPF3BQ9BZI7 483 aaKnown RBP10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 ZBTB1Q9Y2K1 713 aa10.46□□□□□ -0.74
GAPVD1-204ENST00000394083 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 PCDH11XQ9BZA7 1347 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 PCDH11YQ9BZA8 1340 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 FAM182BQ5T319 152 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 ANKRD13DQ6ZTN6 518 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 PRDM11Q9NQV5 511 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 IL2RBP14784 551 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 TFCP2Q12800 502 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 RAD50Q92878 1312 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 CCDC129Q6ZRS4 1044 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 COPRSQ9NQ92 184 aa10.45□□□□□ -0.74
GAPVD1-204ENST00000394083 TNS1Q9HBL0 1735 aaKnown RBP10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 ADORA1P30542 326 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 DBNDD2Q9BQY9 259 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
GAPVD1-204ENST00000394083 BCL2L12Q9HB09 334 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms