RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 AMPHP49418 695 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 NECTIN1Q15223 517 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 RUFY2Q8WXA3 655 aa19.45■□□□□ 0.7
CNP-201ENST00000393888 CEP170BQ9Y4F5 1589 aaPredicted RBP19.45■□□□□ 0.7
CNP-201ENST00000393888 ZKSCAN1P17029 563 aaPredicted RBP19.44■□□□□ 0.7
CNP-201ENST00000393888 TTC21AQ8NDW8 1320 aa19.44■□□□□ 0.7
CNP-201ENST00000393888 LEO1Q8WVC0 666 aaPredicted RBP19.44■□□□□ 0.7
CNP-201ENST00000393888 PA2G4Q9UQ80 394 aaKnown RBP19.44■□□□□ 0.7
CNP-201ENST00000393888 DDX11Q96FC9 970 aa19.44■□□□□ 0.7
CNP-201ENST00000393888 PGBD1Q96JS3 809 aa19.44■□□□□ 0.7
CNP-201ENST00000393888 CLSTN2Q9H4D0 955 aa19.44■□□□□ 0.7
CNP-201ENST00000393888 NPHP1O15259 732 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 TDRD7Q8NHU6 1098 aaKnown RBP19.43■□□□□ 0.7
CNP-201ENST00000393888 KIF18AQ8NI77 898 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 TRMT1Q9NXH9 659 aaKnown RBP19.43■□□□□ 0.7
CNP-201ENST00000393888 PAXBP1Q9Y5B6 917 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 CCDC171Q6TFL3 1326 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 SLFN14P0C7P3 912 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 CEBPZQ03701 1054 aaKnown RBP19.43■□□□□ 0.7
CNP-201ENST00000393888 LTV1Q96GA3 475 aaPredicted RBP19.43■□□□□ 0.7
CNP-201ENST00000393888 TM6SF1Q9BZW5 370 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 ELP1O95163 1332 aa19.43■□□□□ 0.7
CNP-201ENST00000393888 ZNF215Q9UL58 517 aaPredicted RBP19.42■□□□□ 0.7
CNP-201ENST00000393888 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
CNP-201ENST00000393888 SYCP1Q15431 976 aa19.42■□□□□ 0.7
CNP-201ENST00000393888 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
CNP-201ENST00000393888 NMIQ13287 307 aaPredicted RBP19.41■□□□□ 0.7
CNP-201ENST00000393888 KMT5BQ4FZB7 885 aa19.41■□□□□ 0.7
CNP-201ENST00000393888 CLASRPQ8N2M8 674 aaKnown RBP19.41■□□□□ 0.7
CNP-201ENST00000393888 MAP3K5Q99683 1374 aa19.41■□□□□ 0.7
CNP-201ENST00000393888 LRRC8AQ8IWT6 810 aa19.41■□□□□ 0.7
CNP-201ENST00000393888 SCAND2PQ9GZW5 306 aaPredicted RBP19.41■□□□□ 0.7
CNP-201ENST00000393888 ECHDC1Q9NTX5 307 aa19.41■□□□□ 0.7
CNP-201ENST00000393888 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
CNP-201ENST00000393888 SLC27A2O14975 620 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 FBXW7Q969H0 707 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.4■□□□□ 0.7
CNP-201ENST00000393888 MORC2Q9Y6X9 1032 aaPredicted RBP19.4■□□□□ 0.7
CNP-201ENST00000393888 NPHP3Q7Z494 1330 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 JAK2O60674 1132 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 IFIT2P09913 472 aaKnown RBP19.4■□□□□ 0.7
CNP-201ENST00000393888 C11orf57Q6ZUT1 292 aaPredicted RBP19.4■□□□□ 0.7
CNP-201ENST00000393888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.4■□□□□ 0.7
CNP-201ENST00000393888 FILIP1Q7Z7B0 1213 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 CHPF2Q9P2E5 772 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 NRXN3Q9Y4C0 1643 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 TTC41PQ6P2S7 1318 aa19.4■□□□□ 0.7
CNP-201ENST00000393888 FOSBP53539 338 aa19.39■□□□□ 0.7
CNP-201ENST00000393888 NUTM2GQ5VZR2 741 aa19.39■□□□□ 0.7
CNP-201ENST00000393888 KLHL34Q8N239 644 aa19.39■□□□□ 0.7
CNP-201ENST00000393888 BBXQ8WY36 941 aaPredicted RBP19.39■□□□□ 0.7
CNP-201ENST00000393888 ST7Q9NRC1 585 aa19.39■□□□□ 0.7
CNP-201ENST00000393888 USP16Q9Y5T5 823 aa19.39■□□□□ 0.7
CNP-201ENST00000393888 BEND3Q5T5X7 828 aa19.39■□□□□ 0.69
CNP-201ENST00000393888 AACSQ86V21 672 aa19.39■□□□□ 0.69
CNP-201ENST00000393888 USHBP1Q8N6Y0 703 aa19.39■□□□□ 0.69
CNP-201ENST00000393888 KCNB2Q92953 911 aa19.39■□□□□ 0.69
CNP-201ENST00000393888 PDCP20941 246 aa19.39■□□□□ 0.69
CNP-201ENST00000393888 GABPB1Q06547 395 aaPredicted RBP19.39■□□□□ 0.69
CNP-201ENST00000393888 BLOC1S2Q6QNY1 142 aa19.39■□□□□ 0.69
CNP-201ENST00000393888 RBM43Q6ZSC3 357 aaKnown RBP19.39■□□□□ 0.69
CNP-201ENST00000393888 SYTL4Q96C24 671 aaPredicted RBP19.39■□□□□ 0.69
CNP-201ENST00000393888 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 IGSF1Q8N6C5 1336 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 USP6P35125 1406 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 GOLGA6L19H0YKK7 550 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 TOB2Q14106 344 aaPredicted RBP19.38■□□□□ 0.69
CNP-201ENST00000393888 PTPN14Q15678 1187 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 ELF2Q15723 593 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 DNAAF4Q8WXU2 420 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 KDRP35968 1356 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 SKILP12757 684 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
CNP-201ENST00000393888 MAP4K1Q92918 833 aa19.38■□□□□ 0.69
CNP-201ENST00000393888 CCDC8Q9H0W5 538 aaPredicted RBP19.38■□□□□ 0.69
CNP-201ENST00000393888 A0A0D9SFI3 127 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 LTKP29376 864 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 FLT4P35916 1363 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 USP31Q70CQ4 1352 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 ERICH4A6NGS2 130 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 TERF2Q15554 542 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 FBXO38Q6PIJ6 1188 aa19.37■□□□□ 0.69
CNP-201ENST00000393888 UBR1Q8IWV7 1749 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 USP42Q9H9J4 1324 aaKnown RBP19.36■□□□□ 0.69
CNP-201ENST00000393888 IQCB1Q15051 598 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 HSP90AB4PQ58FF6 505 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 EVI5LQ96CN4 794 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 FTOQ9C0B1 505 aaKnown RBP eCLIP19.36■□□□□ 0.69
CNP-201ENST00000393888 PXDNLA1KZ92 1463 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 KCNQ3O43525 872 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 KRT222Q8N1A0 295 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 ZNF397Q8NF99 534 aaPredicted RBP19.36■□□□□ 0.69
CNP-201ENST00000393888 BOLA2Q9H3K6 86 aa19.36■□□□□ 0.69
CNP-201ENST00000393888 CCDC69A6NI79 296 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 RPS6KB1P23443 525 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 PSMA5P28066 241 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 FGD1P98174 961 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 SBNO1A3KN83 1393 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 BRF1Q92994 677 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms