RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 NFKBIEO00221 500 aa29.9■■■□□ 2.38
HMGA2-202ENST00000393577 CCDC30Q5VVM6 783 aa29.89■■■□□ 2.38
HMGA2-202ENST00000393577 NLRP10Q86W26 655 aa29.89■■■□□ 2.38
HMGA2-202ENST00000393577 WDR63Q8IWG1 891 aa29.89■■■□□ 2.38
HMGA2-202ENST00000393577 PHAXQ9H814 394 aaKnown RBP29.89■■■□□ 2.38
HMGA2-202ENST00000393577 CRY2Q49AN0 593 aa29.88■■■□□ 2.37
HMGA2-202ENST00000393577 FANCIQ9NVI1 1328 aa29.88■■■□□ 2.37
HMGA2-202ENST00000393577 PRELPP51888 382 aa29.87■■■□□ 2.37
HMGA2-202ENST00000393577 CHMP4AQ9BY43 222 aa29.87■■■□□ 2.37
HMGA2-202ENST00000393577 LMNB1P20700 586 aa29.86■■■□□ 2.37
HMGA2-202ENST00000393577 GOLGA2Q08379 1002 aa29.86■■■□□ 2.37
HMGA2-202ENST00000393577 TWISTNBQ3B726 338 aaPredicted RBP29.86■■■□□ 2.37
HMGA2-202ENST00000393577 RNF123Q5XPI4 1314 aa29.86■■■□□ 2.37
HMGA2-202ENST00000393577 SOGA3Q5TF21 947 aa29.85■■■□□ 2.37
HMGA2-202ENST00000393577 RPGRQ92834 1020 aaKnown RBP29.85■■■□□ 2.37
HMGA2-202ENST00000393577 ZNF428Q96B54 188 aa29.85■■■□□ 2.37
HMGA2-202ENST00000393577 ALDH1B1P30837 517 aa29.84■■■□□ 2.37
HMGA2-202ENST00000393577 C3orf67Q6ZVT6 689 aa29.84■■■□□ 2.37
HMGA2-202ENST00000393577 RIC3Q7Z5B4 369 aa29.84■■■□□ 2.37
HMGA2-202ENST00000393577 C7orf43Q8WVR3 580 aa29.84■■■□□ 2.37
HMGA2-202ENST00000393577 TRMT112Q9UI30 125 aaKnown RBP29.84■■■□□ 2.37
HMGA2-202ENST00000393577 TIAM2Q8IVF5 1701 aa29.84■■■□□ 2.37
HMGA2-202ENST00000393577 ATP5J2-PTCD1G3V325 749 aa29.83■■■□□ 2.37
HMGA2-202ENST00000393577 ISCA1Q9BUE6 129 aa29.83■■■□□ 2.37
HMGA2-202ENST00000393577 LAMB2P55268 1798 aa29.82■■■□□ 2.36
HMGA2-202ENST00000393577 TCERG1O14776 1098 aaKnown RBP29.82■■■□□ 2.36
HMGA2-202ENST00000393577 CCDC93Q567U6 631 aa29.82■■■□□ 2.36
HMGA2-202ENST00000393577 SLC10A5Q5PT55 438 aa29.82■■■□□ 2.36
HMGA2-202ENST00000393577 NLRP3Q96P20 1036 aa29.82■■■□□ 2.36
HMGA2-202ENST00000393577 TAOK3Q9H2K8 898 aa29.82■■■□□ 2.36
HMGA2-202ENST00000393577 SH3TC1Q8TE82 1336 aa29.81■■■□□ 2.36
HMGA2-202ENST00000393577 SYNE4Q8N205 404 aa29.81■■■□□ 2.36
HMGA2-202ENST00000393577 STK31Q9BXU1 1019 aa29.81■■■□□ 2.36
HMGA2-202ENST00000393577 SPINK5Q9NQ38 1064 aaPredicted RBP29.81■■■□□ 2.36
HMGA2-202ENST00000393577 LTBP3Q9NS15 1303 aa29.8■■■□□ 2.36
HMGA2-202ENST00000393577 HOXA10P31260 410 aaPredicted RBP29.8■■■□□ 2.36
HMGA2-202ENST00000393577 OLFM4Q6UX06 510 aa29.8■■■□□ 2.36
HMGA2-202ENST00000393577 DICER1Q9UPY3 1922 aaKnown RBP29.8■■■□□ 2.36
HMGA2-202ENST00000393577 HCLS1P14317 486 aaPredicted RBP29.79■■■□□ 2.36
HMGA2-202ENST00000393577 C1QTNF8P60827 252 aa29.79■■■□□ 2.36
HMGA2-202ENST00000393577 RBM17Q96I25 401 aaKnown RBP29.79■■■□□ 2.36
HMGA2-202ENST00000393577 ZC3H4Q9UPT8 1303 aaKnown RBP29.78■■■□□ 2.36
HMGA2-202ENST00000393577 DDX60Q8IY21 1712 aaKnown RBP29.77■■■□□ 2.36
HMGA2-202ENST00000393577 DDX58O95786 925 aaKnown RBP29.77■■■□□ 2.36
HMGA2-202ENST00000393577 EXOSC9Q06265 439 aaKnown RBP29.77■■■□□ 2.36
HMGA2-202ENST00000393577 CRAMP1Q96RY5 1269 aa29.77■■■□□ 2.36
HMGA2-202ENST00000393577 MYD88Q99836 296 aa29.77■■■□□ 2.36
HMGA2-202ENST00000393577 CCER2I3L3R5 266 aa29.75■■■□□ 2.35
HMGA2-202ENST00000393577 KIF3CO14782 793 aa29.75■■■□□ 2.35
HMGA2-202ENST00000393577 TRIM28Q13263 835 aaKnown RBP29.75■■■□□ 2.35
HMGA2-202ENST00000393577 FAM89AQ96GI7 184 aa29.75■■■□□ 2.35
HMGA2-202ENST00000393577 MYH16Q9H6N6 1097 aa29.75■■■□□ 2.35
HMGA2-202ENST00000393577 NMRK2Q9NPI5 230 aa29.75■■■□□ 2.35
HMGA2-202ENST00000393577 KDM2BQ8NHM5 1336 aa29.74■■■□□ 2.35
HMGA2-202ENST00000393577 ZNF521Q96K83 1311 aa29.74■■■□□ 2.35
HMGA2-202ENST00000393577 RTKN2Q8IZC4 609 aa29.74■■■□□ 2.35
HMGA2-202ENST00000393577 VAMP4O75379 141 aa29.73■■■□□ 2.35
HMGA2-202ENST00000393577 SLC4A2P04920 1241 aa29.73■■■□□ 2.35
HMGA2-202ENST00000393577 FKBP4Q02790 459 aaKnown RBP eCLIP29.73■■■□□ 2.353e-6■■□□□ 13
HMGA2-202ENST00000393577 MAP3K2Q9Y2U5 619 aa29.73■■■□□ 2.35
HMGA2-202ENST00000393577 CACNA1FO60840 1977 aa29.72■■■□□ 2.35
HMGA2-202ENST00000393577 PPEF1O14829 653 aaPredicted RBP29.72■■■□□ 2.35
HMGA2-202ENST00000393577 RTL5Q5HYW3 569 aaPredicted RBP29.72■■■□□ 2.35
HMGA2-202ENST00000393577 G2E3Q7L622 706 aa29.72■■■□□ 2.35
HMGA2-202ENST00000393577 METTL22Q9BUU2 404 aaPredicted RBP29.72■■■□□ 2.35
HMGA2-202ENST00000393577 ABCC4O15439 1325 aa29.71■■■□□ 2.35
HMGA2-202ENST00000393577 KSR2Q6VAB6 950 aa29.71■■■□□ 2.35
HMGA2-202ENST00000393577 SNED1Q8TER0 1413 aa29.71■■■□□ 2.35
HMGA2-202ENST00000393577 PI4KAP2A4QPH2 592 aa29.7■■■□□ 2.35
HMGA2-202ENST00000393577 SLC51AQ86UW1 340 aa29.7■■■□□ 2.35
HMGA2-202ENST00000393577 PI4KAP1Q8N8J0 262 aa29.7■■■□□ 2.35
HMGA2-202ENST00000393577 ZNF277Q9NRM2 450 aaPredicted RBP29.7■■■□□ 2.35
HMGA2-202ENST00000393577 CC2D2BQ6DHV5 1058 aa29.69■■■□□ 2.34
HMGA2-202ENST00000393577 TAF1P21675 1872 aa29.68■■■□□ 2.34
HMGA2-202ENST00000393577 GLTPD2A6NH11 291 aa29.68■■■□□ 2.34
HMGA2-202ENST00000393577 ZBTB38Q8NAP3 1195 aaPredicted RBP29.68■■■□□ 2.34
HMGA2-202ENST00000393577 CCDC191Q8NCU4 936 aa29.68■■■□□ 2.34
HMGA2-202ENST00000393577 IRS4O14654 1257 aaPredicted RBP29.67■■■□□ 2.34
HMGA2-202ENST00000393577 FLIIQ13045 1269 aa29.67■■■□□ 2.34
HMGA2-202ENST00000393577 DDX46Q7L014 1031 aaKnown RBP29.67■■■□□ 2.34
HMGA2-202ENST00000393577 CWC25Q9NXE8 425 aaPredicted RBP29.67■■■□□ 2.34
HMGA2-202ENST00000393577 RRAGCQ9HB90 399 aa29.66■■■□□ 2.34
HMGA2-202ENST00000393577 PSMD1Q99460 953 aa29.65■■■□□ 2.34
HMGA2-202ENST00000393577 NEXNQ0ZGT2 675 aa29.64■■■□□ 2.34
HMGA2-202ENST00000393577 GRAPQ13588 217 aa29.64■■■□□ 2.34
HMGA2-202ENST00000393577 GRAPLQ8TC17 118 aaPredicted RBP29.64■■■□□ 2.34
HMGA2-202ENST00000393577 ATP6V0A2Q9Y487 856 aa29.64■■■□□ 2.34
HMGA2-202ENST00000393577 PCCAP05165 728 aaPredicted RBP29.63■■■□□ 2.33
HMGA2-202ENST00000393577 IGKV5-2P06315 115 aa29.63■■■□□ 2.33
HMGA2-202ENST00000393577 IARSP41252 1262 aaKnown RBP29.63■■■□□ 2.33
HMGA2-202ENST00000393577 FKBP5Q13451 457 aaPredicted RBP29.63■■■□□ 2.33
HMGA2-202ENST00000393577 SF3B3Q15393 1217 aaKnown RBP29.63■■■□□ 2.33
HMGA2-202ENST00000393577 GRIPAP1Q4V328 841 aa29.63■■■□□ 2.33
HMGA2-202ENST00000393577 DPY19L2Q6NUT2 758 aa29.63■■■□□ 2.33
HMGA2-202ENST00000393577 JARID2Q92833 1246 aaPredicted RBP29.63■■■□□ 2.33
HMGA2-202ENST00000393577 TMX4Q9H1E5 349 aaPredicted RBP29.63■■■□□ 2.33
HMGA2-202ENST00000393577 BBOX1O75936 387 aa29.62■■■□□ 2.33
HMGA2-202ENST00000393577 DIEXFQ68CQ4 756 aaKnown RBP29.62■■■□□ 2.33
HMGA2-202ENST00000393577 WDR90Q96KV7 1748 aa29.6■■■□□ 2.33
HMGA2-202ENST00000393577 TOMM70O94826 608 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms