RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TSPY8P0CW00 308 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 CPEP16870 476 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 PTPREP23469 700 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 TIE1P35590 1138 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 TSPY1Q01534 308 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 PICALMQ13492 652 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 GRAMD1BQ3KR37 738 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 ERICH6BQ5W0A0 696 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 PGBD3Q8N328 593 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 CDC5LQ99459 802 aaKnown RBP4.4□□□□□ -1.71
XRN1-202ENST00000392981 EVLQ9UI08 416 aaPredicted RBP4.4□□□□□ -1.71
XRN1-202ENST00000392981 RABGAP1Q9Y3P9 1069 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 GOLGA6CA6NDK9 693 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 GOLGA6BA6NDN3 693 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 A6NHS1 94 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 ALDH1L1O75891 902 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 MYL3P08590 195 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 GOLGA6DP0CG33 693 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 AMPD3Q01432 767 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 COL19A1Q14993 1142 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 LINC01559Q495D7 138 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 ZBTB46Q86UZ6 589 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 ABTB2Q8N961 1025 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 AS3MTQ9HBK9 375 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 COPRSQ9NQ92 184 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 BMP2KQ9NSY1 1161 aaPredicted RBP4.4□□□□□ -1.71
XRN1-202ENST00000392981 KBTBD4Q9NVX7 518 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 GOLGA6AQ9NYA3 693 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 FAM86C2PA6NEL3 165 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 SLC26A4O43511 780 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 GUCY2FP51841 1108 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 BIRC3Q13489 604 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 C1orf228Q6PIY5 440 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 LEO1Q8WVC0 666 aaPredicted RBP4.4□□□□□ -1.71
XRN1-202ENST00000392981 NBPF3Q9H094 633 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 SAP130Q9H0E3 1048 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 STIM2Q9P246 746 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 PCDHGA4Q9Y5G9 962 aa4.4□□□□□ -1.71
XRN1-202ENST00000392981 FAM221BA6H8Z2 402 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 GPR182O15218 404 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 APOBRQ0VD83 1088 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 TOMM20Q15388 145 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 TAF1CQ15572 869 aaPredicted RBP4.39□□□□□ -1.71
XRN1-202ENST00000392981 SKAP1Q86WV1 359 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 ZIM2Q9NZV7 527 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 USP17L7P0C7H9 530 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 APLP1P51693 650 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 LRRC41Q15345 812 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 SWAP70Q9UH65 585 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 KATNA1O75449 491 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 STRN3Q13033 797 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 CPXCR1Q8N123 301 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 ARMC2Q8NEN0 867 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 C1orf216Q8TAB5 229 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 NEUROD6Q96NK8 337 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 MAP3K20Q9NYL2 800 aaKnown RBP4.39□□□□□ -1.71
XRN1-202ENST00000392981 ERBB3P21860 1342 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 OPLAHO14841 1288 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 GPR37L1O60883 481 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 FBXO24O75426 580 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 CDC27P30260 824 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 TCEA2Q15560 299 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 MYRIPQ8NFW9 859 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 CDC6Q99741 560 aa4.39□□□□□ -1.71
XRN1-202ENST00000392981 RBL2Q08999 1139 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 C16orf86Q6ZW13 317 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 JAMLQ86YT9 394 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 RAVER1Q8IY67 606 aaKnown RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 KCNK17Q96T54 332 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 CD2APQ9Y5K6 639 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 ATAD2Q6PL18 1390 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 EIF1AYO14602 144 aaKnown RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 SCGB1D2O95969 90 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 SSRP1Q08945 709 aaKnown RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 PPP4R3BQ5MIZ7 849 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 PI16Q6UXB8 463 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 CCDC89Q8N998 374 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 C1orf131Q8NDD1 294 aaKnown RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 ACRBPQ8NEB7 543 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 TSKSQ9UJT2 592 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 ATP8A1Q9Y2Q0 1164 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 SOX5P35711 763 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 TTF1Q15361 905 aaPredicted RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 OCLNQ16625 522 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 PROX2Q3B8N5 592 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 C4orf46Q504U0 113 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 FAM43BQ6ZT52 329 aaPredicted RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 PTCD2Q8WV60 388 aaKnown RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 CCT6BQ92526 530 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 JARID2Q92833 1246 aaPredicted RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 FEZ1Q99689 392 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 CTDP1Q9Y5B0 961 aaPredicted RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 RASSF10A6NK89 507 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 SMAD7O15105 426 aaKnown RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 FMR1Q06787 632 aaKnown RBP eCLIP4.38□□□□□ -1.71
XRN1-202ENST00000392981 UBE4AQ14139 1066 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 MAATS1Q7Z4T9 603 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 SMAP1Q8IYB5 467 aaPredicted RBP4.38□□□□□ -1.71
XRN1-202ENST00000392981 CXorf38Q8TB03 319 aa4.38□□□□□ -1.71
XRN1-202ENST00000392981 FRMD4BQ9Y2L6 1034 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms