RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CEP126Q9P2H0 1117 aa22.75■■□□□ 1.23
SHANK1-203ENST00000391813 YEATS4O95619 227 aa22.75■■□□□ 1.23
SHANK1-203ENST00000391813 IRX3P78415 501 aaPredicted RBP22.75■■□□□ 1.23
SHANK1-203ENST00000391813 ENOX2Q16206 610 aaKnown RBP22.75■■□□□ 1.23
SHANK1-203ENST00000391813 CCDC12Q8WUD4 166 aaPredicted RBP22.75■■□□□ 1.23
SHANK1-203ENST00000391813 KDM2BQ8NHM5 1336 aa22.75■■□□□ 1.23
SHANK1-203ENST00000391813 USO1O60763 962 aaKnown RBP22.74■■□□□ 1.23
SHANK1-203ENST00000391813 SEPT7Q16181 437 aaKnown RBP22.74■■□□□ 1.23
SHANK1-203ENST00000391813 IPO4Q8TEX9 1081 aaKnown RBP22.74■■□□□ 1.23
SHANK1-203ENST00000391813 DISP3Q9P2K9 1392 aa22.74■■□□□ 1.23
SHANK1-203ENST00000391813 RNF187Q5TA31 235 aaPredicted RBP22.74■■□□□ 1.23
SHANK1-203ENST00000391813 LUZP1Q86V48 1076 aa22.74■■□□□ 1.23
SHANK1-203ENST00000391813 CNPY2Q9Y2B0 182 aa22.74■■□□□ 1.23
SHANK1-203ENST00000391813 V9GYY5 206 aaPredicted RBP22.74■■□□□ 1.23
SHANK1-203ENST00000391813 YTHDC2Q9H6S0 1430 aaKnown RBP22.74■■□□□ 1.23
SHANK1-203ENST00000391813 PRM3Q9NNZ6 103 aa22.74■■□□□ 1.23
SHANK1-203ENST00000391813 DNAI1Q9UI46 699 aa22.74■■□□□ 1.23
SHANK1-203ENST00000391813 IGHMBP2P38935 993 aaKnown RBP22.73■■□□□ 1.23
SHANK1-203ENST00000391813 PIBF1Q8WXW3 757 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 EVI5LQ96CN4 794 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 RAI14Q9P0K7 980 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 HMG20BQ9P0W2 317 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 CNNM3Q8NE01 707 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 TUBBP07437 444 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 F13A1P00488 732 aa22.73■■□□□ 1.23
SHANK1-203ENST00000391813 FYB1O15117 783 aa22.72■■□□□ 1.23
SHANK1-203ENST00000391813 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
SHANK1-203ENST00000391813 ARHGEF12Q9NZN5 1544 aa22.72■■□□□ 1.23
SHANK1-203ENST00000391813 KRT18P05783 430 aaKnown RBP22.72■■□□□ 1.23
SHANK1-203ENST00000391813 RBSNQ9H1K0 784 aa22.72■■□□□ 1.23
SHANK1-203ENST00000391813 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
SHANK1-203ENST00000391813 NAA15Q9BXJ9 866 aaKnown RBP22.72■■□□□ 1.23
SHANK1-203ENST00000391813 HYPKQ9NX55 129 aa22.72■■□□□ 1.23
SHANK1-203ENST00000391813 DBF4Q9UBU7 674 aaPredicted RBP22.72■■□□□ 1.23
SHANK1-203ENST00000391813 PHAXQ9H814 394 aaKnown RBP22.71■■□□□ 1.23
SHANK1-203ENST00000391813 TMEM2Q9UHN6 1383 aa22.71■■□□□ 1.23
SHANK1-203ENST00000391813 EHBP1Q8NDI1 1231 aa22.71■■□□□ 1.23
SHANK1-203ENST00000391813 ZCRB1Q8TBF4 217 aaKnown RBP22.71■■□□□ 1.23
SHANK1-203ENST00000391813 RASSF4Q9H2L5 321 aa22.71■■□□□ 1.23
SHANK1-203ENST00000391813 TYRO3Q06418 890 aa22.7■■□□□ 1.23
SHANK1-203ENST00000391813 BMP2KQ9NSY1 1161 aaPredicted RBP22.7■■□□□ 1.23
SHANK1-203ENST00000391813 DACT1Q9NYF0 836 aa22.7■■□□□ 1.23
SHANK1-203ENST00000391813 MAST1Q9Y2H9 1570 aa22.7■■□□□ 1.22
SHANK1-203ENST00000391813 ERO1AQ96HE7 468 aa22.7■■□□□ 1.22
SHANK1-203ENST00000391813 ESYT1Q9BSJ8 1104 aa22.7■■□□□ 1.22
SHANK1-203ENST00000391813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.22
SHANK1-203ENST00000391813 NUP133Q8WUM0 1156 aa22.7■■□□□ 1.22
SHANK1-203ENST00000391813 GOLGA6L10A0A0M3HER8 536 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 FKBP15Q5T1M5 1219 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 ANKRD44Q8N8A2 993 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 UBAC1Q9BSL1 405 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 CAPN2P17655 700 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 MAP2K1Q02750 393 aaPredicted RBP22.69■■□□□ 1.22
SHANK1-203ENST00000391813 KLHL10Q6JEL2 608 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 CCDC196A0A1B0GTZ2 297 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 A0A087WZG4 1122 aa22.69■■□□□ 1.22
SHANK1-203ENST00000391813 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
SHANK1-203ENST00000391813 NUP88Q99567 741 aaPredicted RBP22.69■■□□□ 1.22
SHANK1-203ENST00000391813 PDE1AP54750 535 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 BICDL1Q6ZP65 573 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 RSPH14Q9UHP6 348 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 CTAGE15A4D2H0 777 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 CTAGE8P0CG41 777 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 PTGS1P23219 599 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 CTAGE6Q86UF2 777 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 CTAGE4Q8IX94 777 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 BOLA2Q9H3K6 86 aa22.68■■□□□ 1.22
SHANK1-203ENST00000391813 NPATQ14207 1427 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 BIN1O00499 593 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 UBASH3AP57075 661 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 KANK3Q6NY19 840 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 CEP112Q8N8E3 955 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 STK11IPQ8N1F8 1099 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 CKAP4Q07065 602 aaKnown RBP22.67■■□□□ 1.22
SHANK1-203ENST00000391813 MCM6Q14566 821 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 CCDC102BQ68D86 513 aa22.67■■□□□ 1.22
SHANK1-203ENST00000391813 CCDC175P0C221 793 aa22.66■■□□□ 1.22
SHANK1-203ENST00000391813 GOLGA1Q92805 767 aa22.66■■□□□ 1.22
SHANK1-203ENST00000391813 IGSF3O75054 1194 aa22.66■■□□□ 1.22
SHANK1-203ENST00000391813 DDB1Q16531 1140 aa22.66■■□□□ 1.22
SHANK1-203ENST00000391813 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.66■■□□□ 1.22
SHANK1-203ENST00000391813 FLT4P35916 1363 aa22.66■■□□□ 1.22
SHANK1-203ENST00000391813 ZNF500O60304 480 aaPredicted RBP22.66■■□□□ 1.22
SHANK1-203ENST00000391813 DNAJC5Q9H3Z4 198 aa22.66■■□□□ 1.22
SHANK1-203ENST00000391813 CPLX3Q8WVH0 158 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 TTC31Q49AM3 519 aaPredicted RBP22.65■■□□□ 1.22
SHANK1-203ENST00000391813 LARP6Q9BRS8 491 aaKnown RBP22.65■■□□□ 1.22
SHANK1-203ENST00000391813 DNAJC25Q9H1X3 360 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 GUCY1B3Q02153 619 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 ALS2CR12Q96Q35 445 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 PPP1R9BQ96SB3 815 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 MLH3Q9UHC1 1453 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 CHD1O14646 1710 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 GCP02774 474 aa22.65■■□□□ 1.22
SHANK1-203ENST00000391813 CDCA7Q9BWT1 371 aaPredicted RBP22.65■■□□□ 1.22
SHANK1-203ENST00000391813 IFFO1Q0D2I5 559 aa22.64■■□□□ 1.22
SHANK1-203ENST00000391813 SIRT1Q96EB6 747 aa22.64■■□□□ 1.22
SHANK1-203ENST00000391813 F6X3S4 739 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms