RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 SYCP2LQ5T4T6 812 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 SH3PXD2AQ5TCZ1 1133 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 DMRTA1Q5VZB9 504 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 ETFBKMTQ8IXQ9 262 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 FAM9BQ8IZU0 186 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 GJD3Q8N144 294 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 UBR7Q8N806 425 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 PRPF38AQ8NAV1 312 aaKnown RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 ZNF296Q8WUU4 475 aaPredicted RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 HNRNPLLQ8WVV9 542 aaKnown RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 APPBP2Q92624 585 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 GPKOWQ92917 476 aaPredicted RBP eCLIP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 CCDC74AQ96AQ1 378 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 ANAPC16Q96DE5 110 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 CRELD1Q96HD1 420 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 DCBLD2Q96PD2 775 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 SLC4A9Q96Q91 983 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 DEPDC7Q96QD5 511 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 APBA2Q99767 749 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 TRIM56Q9BRZ2 755 aaKnown RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 SPON2Q9BUD6 331 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 RSRP1Q9BUV0 290 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 UBA5Q9GZZ9 404 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 CCDC113Q9H0I3 377 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 UNC93B1Q9H1C4 597 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 QTRT2Q9H974 415 aaKnown RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 CHST12Q9NRB3 414 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 TMPRSS4Q9NRS4 437 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 HOMER2Q9NSB8 354 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 SNTG2Q9NY99 539 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 KLK14Q9P0G3 267 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 RABGEF1Q9UJ41 708 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 SPG7Q9UQ90 795 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 AXIN2Q9Y2T1 843 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 LEMD3Q9Y2U8 911 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 R3HCC1Q9Y3T6 440 aaKnown RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 LAS1LQ9Y4W2 734 aaKnown RBP2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 PARP3Q9Y6F1 533 aa2.03□□□□□ -2.08
RNU1-78P-201ENST00000391248 ERBB3P21860 1342 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 CCDC189A1A4V9 331 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 PSDA5PKW4 1024 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ERVH48-1M5A8F1 160 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 WASLO00401 505 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 SMAD7O15105 426 aaKnown RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 GABBR2O75899 941 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 LDHAP00338 332 aaKnown RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 INHAP05111 366 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 POU3F3P20264 500 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 GBP2P32456 591 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ZAP70P43403 619 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 CDKN1CP49918 316 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 APLP1P51693 650 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 SMTNP53814 917 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 EPHA4P54764 986 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 PPP4CP60510 307 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 OS9Q13438 667 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 UBE4AQ14139 1066 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 MAP3K11Q16584 847 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 LINC01559Q495D7 138 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ODR4Q5SWX8 454 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 NBPF14Q5TI25 921 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 NBPF6Q5VWK0 638 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 PPP4R4Q6NUP7 873 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 FBXL19Q6PCT2 694 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ERMP1Q7Z2K6 904 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 SH3RF1Q7Z6J0 888 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 KIAA0907Q7Z7F0 614 aaPredicted RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 DDX42Q86XP3 938 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 HOMER1Q86YM7 354 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 SLC9A9Q8IVB4 645 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 NME8Q8N427 588 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 CELF2-AS1Q8N7Q2 184 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 TTC16Q8NEE8 873 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 TRPM4Q8TD43 1214 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 RASGRP4Q8TDF6 673 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 NUDT16Q96DE0 195 aaKnown RBP2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 IL17RAQ96F46 866 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 SLC39A13Q96H72 371 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 KCNH8Q96L42 1107 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 C8orf48Q96LL4 319 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 NBPF4Q96M43 638 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 CEP89Q96ST8 783 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 MAF1Q9H063 256 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ETNK1Q9HBU6 452 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ZFYVE28Q9HCC9 887 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 PRDM9Q9NQV7 894 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 SFMBT1Q9UHJ3 866 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 METRNQ9UJH8 293 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 USP20Q9Y2K6 914 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 ATP8A1Q9Y2Q0 1164 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 PRKAB1Q9Y478 270 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 USP3Q9Y6I4 520 aa2.02□□□□□ -2.09
RNU1-78P-201ENST00000391248 A6NJY4 79 aa2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 CDK2AP1O14519 115 aa2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 GIPC1O14908 333 aa2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 RIMBP2O15034 1052 aa2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 CPNE3O75131 537 aaKnown RBP2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 NR1I2O75469 434 aa2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 ALDH1L1O75891 902 aa2.01□□□□□ -2.09
RNU1-78P-201ENST00000391248 DXOO77932 396 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms