RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 MASTLQ96GX5 879 aa28.32■■■□□ 2.12
IGHV3-20-201ENST00000390606 TNRC6CQ9HCJ0 1690 aaKnown RBP28.32■■■□□ 2.12
IGHV3-20-201ENST00000390606 SLC4A2P04920 1241 aa28.31■■■□□ 2.12
IGHV3-20-201ENST00000390606 SLFN5Q08AF3 891 aa28.31■■■□□ 2.12
IGHV3-20-201ENST00000390606 G2E3Q7L622 706 aa28.31■■■□□ 2.12
IGHV3-20-201ENST00000390606 ARFGEF2Q9Y6D5 1785 aa28.31■■■□□ 2.12
IGHV3-20-201ENST00000390606 ATP5J2-PTCD1G3V325 749 aa28.3■■■□□ 2.12
IGHV3-20-201ENST00000390606 ARHGAP27Q6ZUM4 889 aa28.3■■■□□ 2.12
IGHV3-20-201ENST00000390606 RNF123Q5XPI4 1314 aa28.29■■■□□ 2.12
IGHV3-20-201ENST00000390606 TRIM28Q13263 835 aaKnown RBP28.29■■■□□ 2.12
IGHV3-20-201ENST00000390606 CRY2Q49AN0 593 aa28.29■■■□□ 2.12
IGHV3-20-201ENST00000390606 SLC10A5Q5PT55 438 aa28.29■■■□□ 2.12
IGHV3-20-201ENST00000390606 CNKSR1Q969H4 720 aa28.29■■■□□ 2.12
IGHV3-20-201ENST00000390606 CDCA7LQ96GN5 454 aa28.29■■■□□ 2.12
IGHV3-20-201ENST00000390606 DDX58O95786 925 aaKnown RBP28.28■■■□□ 2.12
IGHV3-20-201ENST00000390606 NPR1P16066 1061 aa28.28■■■□□ 2.12
IGHV3-20-201ENST00000390606 KSR2Q6VAB6 950 aa28.27■■■□□ 2.12
IGHV3-20-201ENST00000390606 SYNE4Q8N205 404 aa28.27■■■□□ 2.12
IGHV3-20-201ENST00000390606 TRMT112Q9UI30 125 aaKnown RBP28.27■■■□□ 2.12
IGHV3-20-201ENST00000390606 ADCY9O60503 1353 aa28.26■■■□□ 2.12
IGHV3-20-201ENST00000390606 C3orf67Q6ZVT6 689 aa28.26■■■□□ 2.11
IGHV3-20-201ENST00000390606 ZNF428Q96B54 188 aa28.26■■■□□ 2.11
IGHV3-20-201ENST00000390606 METTL22Q9BUU2 404 aaPredicted RBP28.26■■■□□ 2.11
IGHV3-20-201ENST00000390606 MAP3K2Q9Y2U5 619 aa28.26■■■□□ 2.11
IGHV3-20-201ENST00000390606 PI4KAP2A4QPH2 592 aa28.25■■■□□ 2.11
IGHV3-20-201ENST00000390606 FLIIQ13045 1269 aa28.25■■■□□ 2.11
IGHV3-20-201ENST00000390606 PRPF40BQ6NWY9 871 aaKnown RBP28.25■■■□□ 2.11
IGHV3-20-201ENST00000390606 TRMT2AQ8IZ69 625 aaKnown RBP28.25■■■□□ 2.11
IGHV3-20-201ENST00000390606 PI4KAP1Q8N8J0 262 aa28.25■■■□□ 2.11
IGHV3-20-201ENST00000390606 MYD88Q99836 296 aa28.25■■■□□ 2.11
IGHV3-20-201ENST00000390606 SH3TC1Q8TE82 1336 aa28.24■■■□□ 2.11
IGHV3-20-201ENST00000390606 SLX4Q8IY92 1834 aa28.24■■■□□ 2.11
IGHV3-20-201ENST00000390606 CACNA1FO60840 1977 aa28.23■■■□□ 2.11
IGHV3-20-201ENST00000390606 C7orf43Q8WVR3 580 aa28.22■■■□□ 2.11
IGHV3-20-201ENST00000390606 C21orf2O43822 256 aa28.21■■■□□ 2.11
IGHV3-20-201ENST00000390606 HCLS1P14317 486 aaPredicted RBP28.21■■■□□ 2.11
IGHV3-20-201ENST00000390606 HOXA10P31260 410 aaPredicted RBP28.21■■■□□ 2.11
IGHV3-20-201ENST00000390606 NLRP3Q96P20 1036 aa28.21■■■□□ 2.11
IGHV3-20-201ENST00000390606 CCDC191Q8NCU4 936 aa28.2■■■□□ 2.1
IGHV3-20-201ENST00000390606 FAM89AQ96GI7 184 aa28.2■■■□□ 2.1
IGHV3-20-201ENST00000390606 ZNF219Q9P2Y4 722 aaPredicted RBP28.2■■■□□ 2.1
IGHV3-20-201ENST00000390606 IGKV5-2P06315 115 aa28.19■■■□□ 2.1
IGHV3-20-201ENST00000390606 ALDH1B1P30837 517 aa28.19■■■□□ 2.1
IGHV3-20-201ENST00000390606 ZNF784Q8NCA9 323 aaPredicted RBP28.19■■■□□ 2.1
IGHV3-20-201ENST00000390606 RPGRQ92834 1020 aaKnown RBP28.19■■■□□ 2.1
IGHV3-20-201ENST00000390606 NFKBIEO00221 500 aa28.18■■■□□ 2.1
IGHV3-20-201ENST00000390606 RASSF7Q02833 373 aa28.18■■■□□ 2.1
IGHV3-20-201ENST00000390606 FKBP5Q13451 457 aaPredicted RBP28.18■■■□□ 2.1
IGHV3-20-201ENST00000390606 CACNA1SQ13698 1873 aa28.18■■■□□ 2.1
IGHV3-20-201ENST00000390606 ZBTB38Q8NAP3 1195 aaPredicted RBP28.17■■■□□ 2.1
IGHV3-20-201ENST00000390606 PRELPP51888 382 aa28.16■■■□□ 2.1
IGHV3-20-201ENST00000390606 RTL5Q5HYW3 569 aaPredicted RBP28.16■■■□□ 2.1
IGHV3-20-201ENST00000390606 CRAMP1Q96RY5 1269 aa28.16■■■□□ 2.1
IGHV3-20-201ENST00000390606 CWC25Q9NXE8 425 aaPredicted RBP28.16■■■□□ 2.1
IGHV3-20-201ENST00000390606 C9orf131Q5VYM1 1079 aa28.15■■■□□ 2.1
IGHV3-20-201ENST00000390606 DNAAF4Q8WXU2 420 aa28.15■■■□□ 2.1
IGHV3-20-201ENST00000390606 RBM17Q96I25 401 aaKnown RBP28.15■■■□□ 2.1
IGHV3-20-201ENST00000390606 DDX60Q8IY21 1712 aaKnown RBP28.15■■■□□ 2.1
IGHV3-20-201ENST00000390606 LAMB2P55268 1798 aa28.14■■■□□ 2.1
IGHV3-20-201ENST00000390606 PCCAP05165 728 aaPredicted RBP28.14■■■□□ 2.1
IGHV3-20-201ENST00000390606 HNRNPUQ00839 825 aaKnown RBP eCLIP28.14■■■□□ 2.1
IGHV3-20-201ENST00000390606 NEXNQ0ZGT2 675 aa28.14■■■□□ 2.1
IGHV3-20-201ENST00000390606 SOGA3Q5TF21 947 aa28.14■■■□□ 2.1
IGHV3-20-201ENST00000390606 NEURL1BA8MQ27 555 aa28.13■■■□□ 2.09
IGHV3-20-201ENST00000390606 IRS4O14654 1257 aaPredicted RBP28.13■■■□□ 2.09
IGHV3-20-201ENST00000390606 CWF19L2Q2TBE0 894 aaKnown RBP28.13■■■□□ 2.09
IGHV3-20-201ENST00000390606 OLFM4Q6UX06 510 aa28.13■■■□□ 2.09
IGHV3-20-201ENST00000390606 SBF1O95248 1867 aa28.12■■■□□ 2.09
IGHV3-20-201ENST00000390606 FER1L6Q2WGJ9 1857 aa28.12■■■□□ 2.09
IGHV3-20-201ENST00000390606 MRPL50Q8N5N7 158 aaKnown RBP28.12■■■□□ 2.09
IGHV3-20-201ENST00000390606 F6X3S4 739 aa28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 SF3B3Q15393 1217 aaKnown RBP28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 CCDC93Q567U6 631 aa28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 SSH1Q8WYL5 1049 aa28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 JARID2Q92833 1246 aaPredicted RBP28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 RNF181Q9P0P0 153 aa28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 ABCC4O15439 1325 aa28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 LTBP3Q9NS15 1303 aa28.11■■■□□ 2.09
IGHV3-20-201ENST00000390606 LMNB1P20700 586 aa28.1■■■□□ 2.09
IGHV3-20-201ENST00000390606 SNED1Q8TER0 1413 aa28.09■■■□□ 2.09
IGHV3-20-201ENST00000390606 LINS1Q8NG48 757 aa28.09■■■□□ 2.09
IGHV3-20-201ENST00000390606 TAOK3Q9H2K8 898 aa28.09■■■□□ 2.09
IGHV3-20-201ENST00000390606 CT47B1P0C2W7 299 aaPredicted RBP28.08■■■□□ 2.09
IGHV3-20-201ENST00000390606 SLC51AQ86UW1 340 aa28.08■■■□□ 2.09
IGHV3-20-201ENST00000390606 CDHR2Q9BYE9 1310 aa28.08■■■□□ 2.09
IGHV3-20-201ENST00000390606 PPEF1O14829 653 aaPredicted RBP28.07■■■□□ 2.08
IGHV3-20-201ENST00000390606 DDX46Q7L014 1031 aaKnown RBP28.07■■■□□ 2.08
IGHV3-20-201ENST00000390606 H7C1W4 665 aa28.06■■■□□ 2.08
IGHV3-20-201ENST00000390606 GCKRQ14397 625 aa28.06■■■□□ 2.08
IGHV3-20-201ENST00000390606 ALDH1L2Q3SY69 923 aa28.06■■■□□ 2.08
IGHV3-20-201ENST00000390606 BEND3Q5T5X7 828 aa28.06■■■□□ 2.08
IGHV3-20-201ENST00000390606 CC2D2BQ6DHV5 1058 aa28.06■■■□□ 2.08
IGHV3-20-201ENST00000390606 PDE8AO60658 829 aa28.05■■■□□ 2.08
IGHV3-20-201ENST00000390606 HSP90B1P14625 803 aaKnown RBP28.05■■■□□ 2.08
IGHV3-20-201ENST00000390606 GRAPQ13588 217 aa28.05■■■□□ 2.08
IGHV3-20-201ENST00000390606 RTKN2Q8IZC4 609 aa28.05■■■□□ 2.08
IGHV3-20-201ENST00000390606 GRAPLQ8TC17 118 aaPredicted RBP28.05■■■□□ 2.08
IGHV3-20-201ENST00000390606 BCL2L13Q9BXK5 485 aa28.05■■■□□ 2.08
IGHV3-20-201ENST00000390606 BBOX1O75936 387 aa28.04■■■□□ 2.08
IGHV3-20-201ENST00000390606 FKBP4Q02790 459 aaKnown RBP eCLIP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms