RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PLA2G4EQ3MJ16 856 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 DMGDHQ9UI17 866 aaKnown RBP7.2□□□□□ -1.26
TRAV40-201ENST00000390467 KCNH4Q9UQ05 1017 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 GTF3C3Q9Y5Q9 886 aa7.2□□□□□ -1.26
TRAV40-201ENST00000390467 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
TRAV40-201ENST00000390467 ELOA3DA6NLF2 546 aaPredicted RBP7.19□□□□□ -1.26
TRAV40-201ENST00000390467 FKBP5Q13451 457 aaPredicted RBP7.19□□□□□ -1.26
TRAV40-201ENST00000390467 ELOA3BQ3SY89 546 aa7.19□□□□□ -1.26
TRAV40-201ENST00000390467 IER5Q5VY09 327 aa7.19□□□□□ -1.26
TRAV40-201ENST00000390467 ELOA3Q8NG57 546 aa7.19□□□□□ -1.26
TRAV40-201ENST00000390467 PRIMPOLQ96LW4 560 aa7.19□□□□□ -1.26
TRAV40-201ENST00000390467 KRBA1A5PL33 1030 aa7.18□□□□□ -1.26
TRAV40-201ENST00000390467 GNB5O14775 395 aa7.18□□□□□ -1.26
TRAV40-201ENST00000390467 DGKZQ13574 1117 aa7.18□□□□□ -1.26
TRAV40-201ENST00000390467 OCLNQ16625 522 aa7.18□□□□□ -1.26
TRAV40-201ENST00000390467 TNFRSF25Q93038 417 aa7.18□□□□□ -1.26
TRAV40-201ENST00000390467 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
TRAV40-201ENST00000390467 ADARB2-AS1A8MUL3 147 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 PRMT3O60678 531 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 ELOAQ14241 798 aaKnown RBP7.17□□□□□ -1.26
TRAV40-201ENST00000390467 HIF1AQ16665 826 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 BHMTQ93088 406 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 TRIM11Q96F44 468 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 STARD13Q9Y3M8 1113 aa7.17□□□□□ -1.26
TRAV40-201ENST00000390467 ATG7O95352 703 aa7.16□□□□□ -1.26
TRAV40-201ENST00000390467 ADH7P40394 386 aa7.16□□□□□ -1.26
TRAV40-201ENST00000390467 IDH3AP50213 366 aa7.16□□□□□ -1.26
TRAV40-201ENST00000390467 SWI5Q1ZZU3 235 aa7.16□□□□□ -1.26
TRAV40-201ENST00000390467 TMEM164Q5U3C3 297 aa7.16□□□□□ -1.26
TRAV40-201ENST00000390467 MYO19Q96H55 970 aa7.16□□□□□ -1.26
TRAV40-201ENST00000390467 ALBP02768 609 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 PROCP04070 461 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 INPP5BP32019 993 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 VTI1AQ96AJ9 217 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 SPOCK3Q9BQ16 436 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 SLAIN2Q9P270 581 aa7.15□□□□□ -1.26
TRAV40-201ENST00000390467 COL9A3Q14050 684 aaPredicted RBP7.14□□□□□ -1.27
TRAV40-201ENST00000390467 CAPN12Q6ZSI9 719 aa7.14□□□□□ -1.27
TRAV40-201ENST00000390467 PBXIP1Q96AQ6 731 aa7.14□□□□□ -1.27
TRAV40-201ENST00000390467 CCDC97Q96F63 343 aaPredicted RBP7.14□□□□□ -1.27
TRAV40-201ENST00000390467 GSX2Q9BZM3 304 aa7.14□□□□□ -1.27
TRAV40-201ENST00000390467 M0R082 166 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 IGHA1P01876 353 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 NFKB1P19838 968 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 TBC1D8BQ0IIM8 1120 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 NEUROD1Q13562 356 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 COX20Q5RI15 118 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 ZNF417Q8TAU3 575 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 ZNF587Q96SQ5 575 aaPredicted RBP7.13□□□□□ -1.27
TRAV40-201ENST00000390467 SAP130Q9H0E3 1048 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 C1orf115Q9H7X2 142 aa7.13□□□□□ -1.27
TRAV40-201ENST00000390467 MICAL2O94851 1124 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 ALAS2P22557 587 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 C11orf91Q3C1V1 193 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 FAM26DQ5JW98 314 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 MKNK1Q9BUB5 465 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 CXXC1Q9P0U4 656 aaPredicted RBP7.12□□□□□ -1.27
TRAV40-201ENST00000390467 NAGPAQ9UK23 515 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 SERPINA10Q9UK55 444 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 USP20Q9Y2K6 914 aa7.12□□□□□ -1.27
TRAV40-201ENST00000390467 PIK3R2O00459 728 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 MSTNO14793 375 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 OPLAHO14841 1288 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 ARSDP51689 593 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 CCINQ13939 588 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 C20orf204Q6ZNR8 217 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
TRAV40-201ENST00000390467 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 CCDC82Q8N4S0 544 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 IFT43Q96FT9 208 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 PLVAPQ9BX97 442 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
TRAV40-201ENST00000390467 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
TRAV40-201ENST00000390467 ZFATQ9P243 1243 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 SLC6A14Q9UN76 642 aa7.11□□□□□ -1.27
TRAV40-201ENST00000390467 TNFRSF10BO14763 440 aa7.1□□□□□ -1.27
TRAV40-201ENST00000390467 CHRNA4P43681 627 aa7.1□□□□□ -1.27
TRAV40-201ENST00000390467 KRT25Q7Z3Z0 450 aa7.1□□□□□ -1.27
TRAV40-201ENST00000390467 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
TRAV40-201ENST00000390467 IGFLR1Q9H665 355 aa7.1□□□□□ -1.27
TRAV40-201ENST00000390467 DNAJB12Q9NXW2 375 aaKnown RBP7.1□□□□□ -1.27
TRAV40-201ENST00000390467 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.1□□□□□ -1.27
TRAV40-201ENST00000390467 NID1P14543 1247 aa7.09□□□□□ -1.27
TRAV40-201ENST00000390467 SUZ12Q15022 739 aaKnown RBP7.09□□□□□ -1.27
TRAV40-201ENST00000390467 CD163Q86VB7 1156 aa7.09□□□□□ -1.27
TRAV40-201ENST00000390467 TREML1Q86YW5 311 aa7.09□□□□□ -1.27
TRAV40-201ENST00000390467 CLP1Q92989 425 aaKnown RBP7.09□□□□□ -1.27
TRAV40-201ENST00000390467 PNMA5Q96PV4 448 aa7.09□□□□□ -1.27
TRAV40-201ENST00000390467 PRDM6Q9NQX0 595 aa7.09□□□□□ -1.27
TRAV40-201ENST00000390467 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
TRAV40-201ENST00000390467 FAM229AH3BQW9 127 aa7.08□□□□□ -1.28
TRAV40-201ENST00000390467 EPB42P16452 691 aa7.08□□□□□ -1.28
TRAV40-201ENST00000390467 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
TRAV40-201ENST00000390467 RTCBQ9Y3I0 505 aaKnown RBP7.08□□□□□ -1.28
TRAV40-201ENST00000390467 TARSP26639 723 aaKnown RBP7.07□□□□□ -1.28
TRAV40-201ENST00000390467 NAA30Q147X3 362 aaPredicted RBP7.07□□□□□ -1.28
TRAV40-201ENST00000390467 C16orf46Q6P387 395 aa7.07□□□□□ -1.28
TRAV40-201ENST00000390467 RGL4Q8IZJ4 473 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms