RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 LGR6Q9HBX8 967 aa6.59□□□□□ -1.35
TRAV16-201ENST00000390444 STRN4Q9NRL3 753 aa6.59□□□□□ -1.35
TRAV16-201ENST00000390444 THRAP3Q9Y2W1 955 aaKnown RBP6.59□□□□□ -1.35
TRAV16-201ENST00000390444 KCPQ6ZWJ8 1503 aa6.59□□□□□ -1.35
TRAV16-201ENST00000390444 AFDNP55196 1824 aaKnown RBP6.59□□□□□ -1.35
TRAV16-201ENST00000390444 BCL9LQ86UU0 1499 aa6.59□□□□□ -1.36
TRAV16-201ENST00000390444 TJP1Q07157 1748 aa6.59□□□□□ -1.36
TRAV16-201ENST00000390444 ABCC4O15439 1325 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 PTPRCP08575 1304 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 SPATA31A1Q5TZJ5 1347 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.58□□□□□ -1.36
TRAV16-201ENST00000390444 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 DZIP1LQ8IYY4 767 aaKnown RBP6.58□□□□□ -1.36
TRAV16-201ENST00000390444 ZCRB1Q8TBF4 217 aaKnown RBP6.58□□□□□ -1.36
TRAV16-201ENST00000390444 FRAT1Q92837 279 aaPredicted RBP6.58□□□□□ -1.36
TRAV16-201ENST00000390444 CCDC136Q96JN2 1154 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 PCMTD1Q96MG8 357 aaPredicted RBP6.58□□□□□ -1.36
TRAV16-201ENST00000390444 CHMP4AQ9BY43 222 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 RREB1Q92766 1687 aa6.58□□□□□ -1.36
TRAV16-201ENST00000390444 ANKRD36CQ5JPF3 1778 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 SPATA31A5Q5VU36 1347 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 SPATA31A7Q8IWB4 1347 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 COL5A3P25940 1745 aaPredicted RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 BTBD11A6QL63 1104 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 ERVV-2B6SEH9 535 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 RLBP1P12271 317 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 SSTR3P32745 418 aaPredicted RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 EIF4A1P60842 406 aaKnown RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 MVPQ14764 893 aaKnown RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 KRT24Q2M2I5 525 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 B4GALNT3Q6L9W6 998 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 FTSJ3Q8IY81 847 aaKnown RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 PANK1Q8TE04 598 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 BEGAINQ9BUH8 593 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 API5Q9BZZ5 524 aaKnown RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 MIS18AQ9NYP9 233 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 FAM198AQ9UFP1 575 aa6.57□□□□□ -1.36
TRAV16-201ENST00000390444 NOB1Q9ULX3 412 aaKnown RBP6.57□□□□□ -1.36
TRAV16-201ENST00000390444 KAT6BQ8WYB5 2073 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 ELL2O00472 640 aaPredicted RBP6.56□□□□□ -1.36
TRAV16-201ENST00000390444 ADAMTS2O95450 1211 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 CCDC30Q5VVM6 783 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 FNBP4Q8N3X1 1017 aaPredicted RBP6.56□□□□□ -1.36
TRAV16-201ENST00000390444 TSKSQ9UJT2 592 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 DDX19BQ9UMR2 479 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 COG6Q9Y2V7 657 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 LY75O60449 1722 aa6.56□□□□□ -1.36
TRAV16-201ENST00000390444 BTAF1O14981 1849 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 BRWD3Q6RI45 1802 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 KDM2BQ8NHM5 1336 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 NUTM2BA6NNL0 878 aaPredicted RBP6.55□□□□□ -1.36
TRAV16-201ENST00000390444 NUTM2EB1AL46 878 aaPredicted RBP6.55□□□□□ -1.36
TRAV16-201ENST00000390444 TRIM6-TRIM34B2RNG4 842 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 GIGYF1O75420 1035 aaPredicted RBP6.55□□□□□ -1.36
TRAV16-201ENST00000390444 DNAJB2P25686 324 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 VPS72Q15906 364 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 ZNF790Q6PG37 636 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 UNC5CLQ8IV45 518 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 NUTM2AQ8IVF1 878 aaPredicted RBP6.55□□□□□ -1.36
TRAV16-201ENST00000390444 CLUAP1Q96AJ1 413 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 KCNK17Q96T54 332 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 STK31Q9BXU1 1019 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 CHMP4BQ9H444 224 aaKnown RBP6.55□□□□□ -1.36
TRAV16-201ENST00000390444 TNNQ9UQP3 1299 aa6.55□□□□□ -1.36
TRAV16-201ENST00000390444 BCL9O00512 1426 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 ATRNO75882 1429 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 ATP10DQ9P241 1426 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 RCCD1A6NED2 376 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 KCNQ3O43525 872 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 HSPA1LP34931 641 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 CABP4P57796 275 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 HDGFL1Q5TGJ6 251 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
TRAV16-201ENST00000390444 TMEM57Q8N5G2 664 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 NFATC2IPQ8NCF5 419 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 OTUD5Q96G74 571 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 USP35Q9P2H5 1018 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 TAF1LQ8IZX4 1826 aa6.54□□□□□ -1.36
TRAV16-201ENST00000390444 IBTKQ9P2D0 1353 aaPredicted RBP6.54□□□□□ -1.36
TRAV16-201ENST00000390444 ERBB4Q15303 1308 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 FLIIQ13045 1269 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 SKIV2LQ15477 1246 aaKnown RBP6.53□□□□□ -1.36
TRAV16-201ENST00000390444 CENPQQ7L2Z9 268 aaPredicted RBP6.53□□□□□ -1.36
TRAV16-201ENST00000390444 ITPRIPQ8IWB1 547 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 TTC5Q8N0Z6 440 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 C8orf37Q96NL8 207 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 FMNL2Q96PY5 1086 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 ZBTB40Q9NUA8 1239 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 BCORQ6W2J9 1755 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 NUP98P52948 1817 aa6.53□□□□□ -1.36
TRAV16-201ENST00000390444 EXOC5O00471 708 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 TCERG1O14776 1098 aaKnown RBP6.52□□□□□ -1.37
TRAV16-201ENST00000390444 ONECUT3O60422 494 aaPredicted RBP6.52□□□□□ -1.37
TRAV16-201ENST00000390444 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
TRAV16-201ENST00000390444 DIXDC1Q155Q3 683 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 DDB1Q16531 1140 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 MYSM1Q5VVJ2 828 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 NUDT18Q6ZVK8 323 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms