RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 PGBD1Q96JS3 809 aa24.6■■□□□ 1.53
NKX3-2-201ENST00000382438 SSH2Q76I76 1423 aa24.6■■□□□ 1.53
NKX3-2-201ENST00000382438 EVCP57679 992 aa24.6■■□□□ 1.53
NKX3-2-201ENST00000382438 LEKR1Q6ZMV7 388 aa24.6■■□□□ 1.53
NKX3-2-201ENST00000382438 AXDND1Q5T1B0 1012 aaPredicted RBP24.59■■□□□ 1.53
NKX3-2-201ENST00000382438 F6X3S4 739 aa24.59■■□□□ 1.53
NKX3-2-201ENST00000382438 TADA3O75528 432 aa24.59■■□□□ 1.53
NKX3-2-201ENST00000382438 LEO1Q8WVC0 666 aaPredicted RBP24.59■■□□□ 1.53
NKX3-2-201ENST00000382438 A0A1W2PP64 1363 aa24.59■■□□□ 1.53
NKX3-2-201ENST00000382438 USP32Q8NFA0 1604 aa24.59■■□□□ 1.53
NKX3-2-201ENST00000382438 ME3Q16798 604 aa24.58■■□□□ 1.53
NKX3-2-201ENST00000382438 CEP83Q9Y592 693 aa24.58■■□□□ 1.53
NKX3-2-201ENST00000382438 LRRC7Q96NW7 1537 aa24.58■■□□□ 1.53
NKX3-2-201ENST00000382438 CCDC172P0C7W6 258 aa24.58■■□□□ 1.53
NKX3-2-201ENST00000382438 ADCK5Q3MIX3 580 aa24.58■■□□□ 1.53
NKX3-2-201ENST00000382438 ERCC4Q92889 916 aaPredicted RBP24.58■■□□□ 1.53
NKX3-2-201ENST00000382438 TTC21BQ7Z4L5 1316 aa24.58■■□□□ 1.52
NKX3-2-201ENST00000382438 EVC2Q86UK5 1308 aa24.58■■□□□ 1.52
NKX3-2-201ENST00000382438 IL1RAPL2Q9NP60 686 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 PDRG1Q9NUG6 133 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 TTC21AQ8NDW8 1320 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 FANCGO15287 622 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 FAM177A1Q8N128 213 aaPredicted RBP24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 VPS18Q9P253 973 aa24.57■■□□□ 1.52
NKX3-2-201ENST00000382438 NBPF11Q86T75 865 aa24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 PLEKHA4Q9H4M7 779 aa24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 KCND1Q9NSA2 647 aa24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 PLCH2O75038 1416 aa24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 ATP8B1O43520 1251 aa24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 NUTM1Q86Y26 1132 aa24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 JAKMIP1Q96N16 626 aaKnown RBP24.56■■□□□ 1.52
NKX3-2-201ENST00000382438 ETF1P62495 437 aaKnown RBP24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 ARMCX5Q6P1M9 558 aa24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 FUT8Q9BYC5 575 aa24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 CCDC158Q5M9N0 1113 aa24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 IQUBQ8NA54 791 aa24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 ZNF622Q969S3 477 aaKnown RBP eCLIP24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 SCAND2PQ9GZW5 306 aaPredicted RBP24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 CXorf56Q9H5V9 222 aa24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 ARFGAP3Q9NP61 516 aa24.55■■□□□ 1.52
NKX3-2-201ENST00000382438 CEBPZQ03701 1054 aaKnown RBP24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 CWC27Q6UX04 472 aaKnown RBP24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 DHX40Q8IX18 779 aaKnown RBP24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 PNMA6EA0A0J9YXQ4 647 aa24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 SKIDA1Q1XH10 827 aa24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 LSG1Q9H089 658 aaKnown RBP24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 PSD3Q9NYI0 1048 aa24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 KIAA0232Q92628 1395 aa24.54■■□□□ 1.52
NKX3-2-201ENST00000382438 NUTM2DQ5VT03 806 aaPredicted RBP24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 TMC6Q7Z403 805 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 AOPEPQ8N6M6 819 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 EFCAB8A8MWE9 144 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 SGSM2O43147 1006 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 CNPY4Q8N129 248 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 PRAM1Q96QH2 718 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 QRICH2Q9H0J4 1663 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 GSDMDP57764 484 aa24.53■■□□□ 1.52
NKX3-2-201ENST00000382438 IVLP07476 585 aa24.52■■□□□ 1.52
NKX3-2-201ENST00000382438 DNAJC21Q5F1R6 531 aaKnown RBP24.52■■□□□ 1.52
NKX3-2-201ENST00000382438 PARD6BQ9BYG5 372 aa24.52■■□□□ 1.52
NKX3-2-201ENST00000382438 FAM212AQ96EL1 285 aa24.51■■□□□ 1.51
NKX3-2-201ENST00000382438 INO80Q9ULG1 1556 aaPredicted RBP24.51■■□□□ 1.51
NKX3-2-201ENST00000382438 PSDA5PKW4 1024 aaPredicted RBP24.51■■□□□ 1.51
NKX3-2-201ENST00000382438 COL9A3Q14050 684 aaPredicted RBP24.51■■□□□ 1.51
NKX3-2-201ENST00000382438 LARP1Q6PKG0 1096 aaKnown RBP24.51■■□□□ 1.51
NKX3-2-201ENST00000382438 SMC2O95347 1197 aa24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 SFPQP23246 707 aaKnown RBP eCLIP24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 TPCN1Q9ULQ1 816 aa24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 MCM6Q14566 821 aa24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 STX1AQ16623 288 aa24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 PPM1EQ8WY54 764 aa24.5■■□□□ 1.51
NKX3-2-201ENST00000382438 PRPF40BQ6NWY9 871 aaKnown RBP24.49■■□□□ 1.51
NKX3-2-201ENST00000382438 TCEANC2Q96MN5 208 aa24.49■■□□□ 1.51
NKX3-2-201ENST00000382438 PDE11AQ9HCR9 933 aa24.49■■□□□ 1.51
NKX3-2-201ENST00000382438 TRIM65Q6PJ69 517 aa24.49■■□□□ 1.51
NKX3-2-201ENST00000382438 CCDC91Q7Z6B0 441 aa24.49■■□□□ 1.51
NKX3-2-201ENST00000382438 OSBPL5Q9H0X9 879 aaPredicted RBP24.49■■□□□ 1.51
NKX3-2-201ENST00000382438 N4BP1O75113 896 aaKnown RBP24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 CAVIN2O95810 425 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 NBPF6Q5VWK0 638 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 DDX11Q96FC9 970 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 NBPF4Q96M43 638 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 C14orf93Q9H972 538 aaKnown RBP24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 PARP3Q9Y6F1 533 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 LRRFIP1Q32MZ4 808 aaKnown RBP24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 LONRF2Q1L5Z9 754 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 G2E3Q7L622 706 aa24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 XPO4Q9C0E2 1151 aaKnown RBP24.48■■□□□ 1.51
NKX3-2-201ENST00000382438 CORO7P57737 925 aa24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 ZSCAN31Q96LW9 406 aaPredicted RBP24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 SH2B1Q9NRF2 756 aaPredicted RBP24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 STAP2Q9UGK3 403 aa24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 PNPLA6Q8IY17 1366 aa24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 GNAI2P04899 355 aa24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 TPM1P09493 284 aa24.47■■□□□ 1.51
NKX3-2-201ENST00000382438 MCTP2Q6DN12 878 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms