RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 DBF4Q9UBU7 674 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CTAGE15A4D2H0 777 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CTAGE8P0CG41 777 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CTAGE6Q86UF2 777 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CTAGE4Q8IX94 777 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 ABCC5O15440 1437 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CCDC40Q4G0X9 1142 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 ARFGAP3Q9NP61 516 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 TMCO5BA8MYB1 307 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 SKILP12757 684 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CCDC85AQ96PX6 553 aaPredicted RBP19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 EHMT1Q9H9B1 1298 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 TCP11L1Q9NUJ3 509 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 ZNF652Q9Y2D9 606 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 UBASH3AP57075 661 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 CETN1Q12798 172 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 PPP4R3AQ6IN85 833 aa19.65■□□□□ 0.74
SNAPC3-202ENST00000380821 TUBB4BP68371 445 aa19.64■□□□□ 0.74
SNAPC3-202ENST00000380821 UBE4AQ14139 1066 aa19.64■□□□□ 0.74
SNAPC3-202ENST00000380821 USP48Q86UV5 1035 aa19.64■□□□□ 0.74
SNAPC3-202ENST00000380821 NCOA7Q8NI08 942 aa19.64■□□□□ 0.74
SNAPC3-202ENST00000380821 RANBP6O60518 1105 aaKnown RBP19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 CUL5Q93034 780 aa19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 METAP2P50579 478 aaKnown RBP eCLIP19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 ORC3Q9UBD5 711 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 LARP6Q9BRS8 491 aaKnown RBP19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 CCDC94Q9BW85 323 aaPredicted RBP19.64■□□□□ 0.73
SNAPC3-202ENST00000380821 KCNG4Q8TDN1 519 aa19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 CNPY2Q9Y2B0 182 aa19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 C6orf163Q5TEZ5 329 aa19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 ZNF444Q8N0Y2 327 aaPredicted RBP19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 CEP63Q96MT8 703 aa19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 NSRP1Q9H0G5 558 aaKnown RBP19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 KIF5BP33176 963 aa19.63■□□□□ 0.73
SNAPC3-202ENST00000380821 OPA1O60313 960 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 HSPA4P34932 840 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 TMEM67Q5HYA8 995 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 SYKP43405 635 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 IPO4Q8TEX9 1081 aaKnown RBP19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 SLU7O95391 586 aaKnown RBP19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 ANKRD36BQ8N2N9 1353 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 CYLC1P35663 651 aaPredicted RBP19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 ANKRD18BA2A2Z9 1011 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 BMP15O95972 392 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 LIG1P18858 919 aa19.62■□□□□ 0.73
SNAPC3-202ENST00000380821 STXBP4Q6ZWJ1 553 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 CUL7Q14999 1698 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 MNAT1P51948 309 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 DZIP1Q86YF9 867 aaKnown RBP19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 SNAPC4Q5SXM2 1469 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 CCDC186Q7Z3E2 898 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 CCDC155Q8N6L0 562 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 ZNF830Q96NB3 372 aaPredicted RBP19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
SNAPC3-202ENST00000380821 FSD2A1L4K1 749 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 N4BP3O15049 544 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 GTF2A1P52655 376 aaPredicted RBP19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 PPM1EQ8WY54 764 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 TMOD2Q9NZR1 351 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 F13A1P00488 732 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 GOLGA1Q92805 767 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 SPAG1Q07617 926 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 MRPS27Q92552 414 aaKnown RBP19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 SDSP20132 328 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 IQGAP2Q13576 1575 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 CCDC172P0C7W6 258 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 RAB3GAP1Q15042 981 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 C8orf34Q49A92 452 aa19.6■□□□□ 0.73
SNAPC3-202ENST00000380821 PRDM11Q9NQV5 511 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 DNAI1Q9UI46 699 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 NOP2P46087 812 aaKnown RBP19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 EXOC1Q9NV70 894 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 MAP3K2Q9Y2U5 619 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 NME9Q86XW9 330 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 CCDC82Q8N4S0 544 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 ESYT1Q9BSJ8 1104 aa19.59■□□□□ 0.73
SNAPC3-202ENST00000380821 CTNNA2P26232 953 aa19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 HMGB2P26583 209 aaKnown RBP19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 SLF2Q8IX21 1173 aa19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 TRIM47Q96LD4 638 aa19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 CRACR2BQ8N4Y2 399 aaPredicted RBP19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 EMILIN1Q9Y6C2 1016 aa19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
SNAPC3-202ENST00000380821 ZSWIM4Q9H7M6 989 aa19.58■□□□□ 0.72
SNAPC3-202ENST00000380821 SMC5Q8IY18 1101 aa19.58■□□□□ 0.72
SNAPC3-202ENST00000380821 DISP3Q9P2K9 1392 aa19.58■□□□□ 0.72
SNAPC3-202ENST00000380821 PPP1R42Q7Z4L9 355 aa19.58■□□□□ 0.72
SNAPC3-202ENST00000380821 SLC26A6Q9BXS9 759 aa19.58■□□□□ 0.72
SNAPC3-202ENST00000380821 PRPF4BQ13523 1007 aaKnown RBP19.57■□□□□ 0.72
SNAPC3-202ENST00000380821 CCDC96Q2M329 555 aa19.57■□□□□ 0.72
SNAPC3-202ENST00000380821 SPATA24Q86W54 205 aa19.57■□□□□ 0.72
SNAPC3-202ENST00000380821 RRAGBQ5VZM2 374 aa19.57■□□□□ 0.72
SNAPC3-202ENST00000380821 MFSD6Q6ZSS7 791 aa19.57■□□□□ 0.72
SNAPC3-202ENST00000380821 STMN4Q9H169 189 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms