RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 TCIRG1Q13488 830 aa16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
TNFSF13-203ENST00000380535 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.3
TNFSF13-203ENST00000380535 PDE1AP54750 535 aa16.95■□□□□ 0.3
TNFSF13-203ENST00000380535 OS9Q13438 667 aaPredicted RBP16.95■□□□□ 0.3
TNFSF13-203ENST00000380535 PALLDQ8WX93 1383 aa16.95■□□□□ 0.3
TNFSF13-203ENST00000380535 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
TNFSF13-203ENST00000380535 MX1P20591 662 aa16.95■□□□□ 0.3
TNFSF13-203ENST00000380535 AFF2P51816 1311 aa16.95■□□□□ 0.3
TNFSF13-203ENST00000380535 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 APBB1O00213 710 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 COL5A3P25940 1745 aaPredicted RBP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 MFAP1P55081 439 aaKnown RBP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 SIK1P57059 783 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 GIGYF2Q6Y7W6 1299 aaKnown RBP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 RGL2O15211 777 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 CASP7P55210 303 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 GPATCH3Q96I76 525 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 SLC4A9Q96Q91 983 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 C22orf23Q9BZE7 217 aa16.94■□□□□ 0.3
TNFSF13-203ENST00000380535 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 UBE3BQ7Z3V4 1068 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 IPO4Q8TEX9 1081 aaKnown RBP16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 ZBTB3Q9H5J0 574 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 COPRSQ9NQ92 184 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
TNFSF13-203ENST00000380535 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
TNFSF13-203ENST00000380535 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
TNFSF13-203ENST00000380535 A0A0G2JS52 829 aa16.92■□□□□ 0.3
TNFSF13-203ENST00000380535 GSPT1P15170 499 aaKnown RBP16.92■□□□□ 0.3
TNFSF13-203ENST00000380535 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
TNFSF13-203ENST00000380535 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 NUP98P52948 1817 aa16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 BECN1Q14457 450 aa16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 PLA2G12BQ9BX93 195 aa16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 ZBTB1Q9Y2K1 713 aa16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
TNFSF13-203ENST00000380535 ERC2O15083 957 aa16.9■□□□□ 0.3
TNFSF13-203ENST00000380535 EIF5P55010 431 aaKnown RBP16.9■□□□□ 0.3
TNFSF13-203ENST00000380535 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
TNFSF13-203ENST00000380535 IGSF3O75054 1194 aa16.89■□□□□ 0.3
TNFSF13-203ENST00000380535 CHRM1P11229 460 aaPredicted RBP16.89■□□□□ 0.3
TNFSF13-203ENST00000380535 TEX2Q8IWB9 1127 aa16.89■□□□□ 0.3
TNFSF13-203ENST00000380535 BTAF1O14981 1849 aa16.89■□□□□ 0.29
TNFSF13-203ENST00000380535 DZIP3Q86Y13 1208 aaKnown RBP16.89■□□□□ 0.29
TNFSF13-203ENST00000380535 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-203ENST00000380535 AK7Q96M32 723 aa16.89■□□□□ 0.29
TNFSF13-203ENST00000380535 ZNF330Q9Y3S2 320 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-203ENST00000380535 SDSP20132 328 aa16.88■□□□□ 0.29
TNFSF13-203ENST00000380535 CRKLP46109 303 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-203ENST00000380535 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-203ENST00000380535 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
TNFSF13-203ENST00000380535 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-203ENST00000380535 SBF2Q86WG5 1849 aa16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 GLRX3O76003 335 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 IFIT2P09913 472 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 FOXO4P98177 505 aa16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 RFX5P48382 616 aaPredicted RBP16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
TNFSF13-203ENST00000380535 BCORQ6W2J9 1755 aa16.86■□□□□ 0.29
TNFSF13-203ENST00000380535 EPB41L2O43491 1005 aaKnown RBP16.86■□□□□ 0.29
TNFSF13-203ENST00000380535 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
TNFSF13-203ENST00000380535 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
TNFSF13-203ENST00000380535 LY75O60449 1722 aa16.86■□□□□ 0.29
TNFSF13-203ENST00000380535 MYH3P11055 1940 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 REC8O95072 547 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 GSE1Q14687 1217 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 CIAO1O76071 339 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 PTPN12Q05209 780 aaKnown RBP16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
TNFSF13-203ENST00000380535 KCNQ2O43526 872 aa16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 ITPK1Q13572 414 aa16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 CLEC4GQ6UXB4 293 aa16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 ZNF34Q8IZ26 560 aa16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 CNTROBQ8N137 903 aa16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 ZFP91Q96JP5 570 aaPredicted RBP16.84■□□□□ 0.29
TNFSF13-203ENST00000380535 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms