RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 CAMSAP2Q08AD1 1489 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 BMP15O95972 392 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 UBE4AQ14139 1066 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 ESYT1Q9BSJ8 1104 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 CCT2P78371 535 aaKnown RBP19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 MYRIPQ8NFW9 859 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 TMCO5BA8MYB1 307 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 N4BP3O15049 544 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 ZNF76P36508 570 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 OTUD6BQ8N6M0 293 aa19.59■□□□□ 0.73
COL4A3BP-203ENST00000380494 AOPEPQ8N6M6 819 aa19.58■□□□□ 0.73
COL4A3BP-203ENST00000380494 MCM10Q7L590 875 aa19.58■□□□□ 0.73
COL4A3BP-203ENST00000380494 DNAJC25Q9H1X3 360 aa19.58■□□□□ 0.73
COL4A3BP-203ENST00000380494 CCDC129Q6ZRS4 1044 aa19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 ZFP91Q96JP5 570 aaPredicted RBP19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 DACT1Q9NYF0 836 aa19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 USP16Q9Y5T5 823 aa19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 FSD2A1L4K1 749 aa19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 IARSP41252 1262 aaKnown RBP19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 ATP2B2Q01814 1243 aa19.58■□□□□ 0.72
COL4A3BP-203ENST00000380494 ANKRD18BA2A2Z9 1011 aa19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 KRT83P78385 493 aa19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 TUBB2AQ13885 445 aa19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 TUBB2BQ9BVA1 445 aa19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 ORC3Q9UBD5 711 aaPredicted RBP19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 DDX54Q8TDD1 881 aaKnown RBP19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 PTGS1P23219 599 aa19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 DNA2P51530 1060 aa19.57■□□□□ 0.72
COL4A3BP-203ENST00000380494 CALML4Q96GE6 196 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 CCDC194A0A1B0GVG4 234 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 ARFGAP2Q8N6H7 521 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 TACC1O75410 805 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 METTL24Q5JXM2 366 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 RASAL2Q9UJF2 1139 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 TTC14Q96N46 770 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 SELENOOQ9BVL4 669 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 PCDHB15Q9Y5E8 787 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 FAM177BA6PVY3 158 aa19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 IGHMBP2P38935 993 aaKnown RBP19.56■□□□□ 0.72
COL4A3BP-203ENST00000380494 GBP6Q6ZN66 633 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 ABCC5O15440 1437 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 NLRP5P59047 1200 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 MAP3K12Q12852 859 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 RSRC1Q96IZ7 334 aaKnown RBP19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 MATR3P43243 847 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 ANKRD24Q8TF21 1146 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 LARP6Q9BRS8 491 aaKnown RBP19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 IFIT3O14879 490 aaKnown RBP19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 CCDC40Q4G0X9 1142 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 ESCO1Q5FWF5 840 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 CATIPQ7Z7H3 387 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 NCOA7Q8NI08 942 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 ATRIPQ8WXE1 791 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 PIBF1Q8WXW3 757 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 TCP11L1Q9NUJ3 509 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
COL4A3BP-203ENST00000380494 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 A6NNZ2 444 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 KIF4AO95239 1232 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 FLIIQ13045 1269 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 TUBB8Q3ZCM7 444 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 FAM76AQ8TAV0 307 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 CCDC172P0C7W6 258 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 METAP2P50579 478 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 CETN1Q12798 172 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 KIAA0753Q2KHM9 967 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 KRBA2Q6ZNG9 492 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 FBF1Q8TES7 1133 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 CTNNBL1Q8WYA6 563 aaPredicted RBP19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 TTF1Q15361 905 aaPredicted RBP19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 CCDC96Q2M329 555 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 C10orf67Q8IYJ2 551 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 DNAI2Q9GZS0 605 aa19.54■□□□□ 0.72
COL4A3BP-203ENST00000380494 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 POLR3DP05423 398 aaPredicted RBP19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 CCDC6Q16204 474 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 TRIM21P19474 475 aaKnown RBP19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 ZNF445P59923 1031 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 TNIP1Q15025 636 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 F6X3S4 739 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 KRT86O43790 486 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 DNM1Q05193 864 aaKnown RBP19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 AKR1B10O60218 316 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 PDE1AP54750 535 aa19.53■□□□□ 0.72
COL4A3BP-203ENST00000380494 NOP2P46087 812 aaKnown RBP19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 SYT10Q6XYQ8 523 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 PRPHP41219 470 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 B4GALNT4Q76KP1 1039 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 POTEDQ86YR6 584 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 ATL3Q6DD88 541 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 TRIM47Q96LD4 638 aa19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL4A3BP-203ENST00000380494 PARD3Q8TEW0 1356 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms