RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CPLX2Q6PUV4 134 aaKnown RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 SH3GL3Q99963 347 aa10.96□□□□□ -0.65
PTPRA-204ENST00000380393 PHF23Q9BUL5 403 aaPredicted RBP10.96□□□□□ -0.65
PTPRA-204ENST00000380393 TRPM1Q7Z4N2 1603 aa10.96□□□□□ -0.66
PTPRA-204ENST00000380393 GADD45BO75293 160 aaPredicted RBP10.96□□□□□ -0.66
PTPRA-204ENST00000380393 MYBL2P10244 700 aa10.96□□□□□ -0.66
PTPRA-204ENST00000380393 TXNDC2Q86VQ3 553 aa10.96□□□□□ -0.66
PTPRA-204ENST00000380393 CCDC26Q8TAB7 109 aa10.96□□□□□ -0.66
PTPRA-204ENST00000380393 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.66
PTPRA-204ENST00000380393 GDPD2Q9HCC8 539 aa10.96□□□□□ -0.66
PTPRA-204ENST00000380393 ERLIN2O94905 339 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 CTCFLQ8NI51 663 aaPredicted RBP10.95□□□□□ -0.66
PTPRA-204ENST00000380393 ARMC3Q5W041 872 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 ZSCAN25Q6NSZ9 544 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 WAPLQ7Z5K2 1190 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 DZIP1LQ8IYY4 767 aaKnown RBP10.95□□□□□ -0.66
PTPRA-204ENST00000380393 TCP11L2Q8N4U5 519 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 CCDC171Q6TFL3 1326 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 TMEM131LA2VDJ0 1609 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 AP1G2O75843 785 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 POLD1P28340 1107 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 TRIM74Q86UV6 250 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 TRIM73Q86UV7 250 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 UBXN6Q9BZV1 441 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 KDM4CQ9H3R0 1056 aa10.95□□□□□ -0.66
PTPRA-204ENST00000380393 SPATS2LQ9NUQ6 558 aaKnown RBP10.95□□□□□ -0.66
PTPRA-204ENST00000380393 NF2P35240 595 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 RWDD2BP57060 319 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 TRAF1Q13077 416 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 ERC1Q8IUD2 1116 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 TMTC2Q8N394 836 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 STAG1Q8WVM7 1258 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 TSR2Q969E8 191 aaKnown RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 RIMS2Q9UQ26 1411 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 FER1L4A9Z1Z3 1794 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 NEXMIFQ5QGS0 1516 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 GCFC2P16383 781 aaKnown RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 CCNHP51946 323 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 ZKSCAN2Q63HK3 967 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 MKRN1Q9UHC7 482 aaKnown RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 NRBP1Q9UHY1 535 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 RIMS1Q86UR5 1692 aaKnown RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 SMARCA5O60264 1052 aaPredicted RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 MVPQ14764 893 aaKnown RBP10.94□□□□□ -0.66
PTPRA-204ENST00000380393 RINLQ6ZS11 566 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 KAT2BQ92831 832 aa10.94□□□□□ -0.66
PTPRA-204ENST00000380393 PIK3C2GO75747 1445 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 ZNF483Q8TF39 744 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-204ENST00000380393 C3P01024 1663 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 RPGRIP1LQ68CZ1 1315 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 USP27XA6NNY8 438 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 ATP8B1O43520 1251 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 ECEL1O95672 775 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 HSPA2P54652 639 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 LRRC31Q6UY01 552 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 UBXN4Q92575 508 aa10.93□□□□□ -0.66
PTPRA-204ENST00000380393 TEX13AQ9BXU3 409 aaPredicted RBP10.93□□□□□ -0.66
PTPRA-204ENST00000380393 RDXP35241 583 aaKnown RBP10.92□□□□□ -0.66
PTPRA-204ENST00000380393 LIG3P49916 1009 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 ANAPC4Q9UJX5 808 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 SGSM2O43147 1006 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 FBXW10Q5XX13 1052 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 LRRN4CLQ8ND94 238 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 TRMT1Q9NXH9 659 aaKnown RBP10.92□□□□□ -0.66
PTPRA-204ENST00000380393 GPRASP1Q5JY77 1395 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 MINK1Q8N4C8 1332 aaPredicted RBP10.92□□□□□ -0.66
PTPRA-204ENST00000380393 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 SASH3O75995 380 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 SCRN1Q12765 414 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 RBBP5Q15291 538 aaKnown RBP10.92□□□□□ -0.66
PTPRA-204ENST00000380393 KCNV1Q6PIU1 500 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 KCNB2Q92953 911 aa10.92□□□□□ -0.66
PTPRA-204ENST00000380393 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 EME2A4GXA9 379 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-204ENST00000380393 CCP110O43303 1012 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 MX1P20591 662 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 PRAM1Q96QH2 718 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 VPS18Q9P253 973 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 EIF5P55010 431 aaKnown RBP10.91□□□□□ -0.66
PTPRA-204ENST00000380393 HDAC1Q13547 482 aaPredicted RBP10.91□□□□□ -0.66
PTPRA-204ENST00000380393 TBC1D9Q6ZT07 1266 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 METP08581 1390 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 ABCD1P33897 745 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 GIMAP6Q6P9H5 292 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 NYAP1Q6ZVC0 841 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 WDR63Q8IWG1 891 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
PTPRA-204ENST00000380393 CACTINQ8WUQ7 758 aaKnown RBP10.91□□□□□ -0.66
PTPRA-204ENST00000380393 PLEKHA4Q9H4M7 779 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 PPLO60437 1756 aa10.91□□□□□ -0.66
PTPRA-204ENST00000380393 ST18O60284 1047 aa10.9□□□□□ -0.66
PTPRA-204ENST00000380393 RPS6KA5O75582 802 aa10.9□□□□□ -0.66
PTPRA-204ENST00000380393 GCKP35557 465 aa10.9□□□□□ -0.66
PTPRA-204ENST00000380393 GRIK3Q13003 919 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms