RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SOS2Q07890 1332 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 IFIT2P09913 472 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 HSPA4P34932 840 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 ANAPC15P60006 121 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 CLEC17AQ6ZS10 378 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 CHAMP1Q96JM3 812 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 LSG1Q9H089 658 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 CCDC8Q9H0W5 538 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 ECHDC1Q9NTX5 307 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 PARP4Q9UKK3 1724 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 COL5A2P05997 1499 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 ZCRB1Q8TBF4 217 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 IL17RAQ96F46 866 aa9.67□□□□□ -0.86
PDLIM5-204ENST00000380176 LAMB4A4D0S4 1761 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 NBPF26B4DH59 902 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 XRCC6P12956 609 aaKnown RBP eCLIP9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 G3BP1Q13283 466 aaKnown RBP eCLIP9.66□□□□□ -0.868e-6■□□□□ 9
PDLIM5-204ENST00000380176 NBPF14Q5TI25 921 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 NBPF10Q6P3W6 841 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 NBPF15Q8N660 670 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 CWC22Q9HCG8 908 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 HDAC5Q9UQL6 1122 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 SHANK3Q9BYB0 1731 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 RAD50Q92878 1312 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 GOLGA6L3A6NEY3 463 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 NUCB2P80303 420 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
PDLIM5-204ENST00000380176 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 STRN4Q9NRL3 753 aa9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 SNX14Q9Y5W7 946 aa9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 PLEKHG2Q9H7P9 1386 aa9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 UBR2Q8IWV8 1755 aa9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 MCTP1Q6DN14 999 aa9.65□□□□□ -0.86
PDLIM5-204ENST00000380176 PCDH11XQ9BZA7 1347 aa9.65□□□□□ -0.87
PDLIM5-204ENST00000380176 PCDH11YQ9BZA8 1340 aa9.65□□□□□ -0.87
PDLIM5-204ENST00000380176 PTH1RQ03431 593 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 FOXD4L5Q5VV16 416 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 FOXD4L4Q8WXT5 416 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 PANK2Q9BZ23 570 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 A1BGP04217 495 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 CUL4AQ13619 759 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 TTLL7Q6ZT98 887 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 GAS2L3Q86XJ1 694 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 DIAPH3Q9NSV4 1193 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 A0A087WZG4 1122 aa9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 EPB41L2O43491 1005 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 L1TD1Q5T7N2 865 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-204ENST00000380176 CPA1P15085 419 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 MCM2P49736 904 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 POTEDQ86YR6 584 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 GPATCH3Q96I76 525 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 FAM227BQ96M60 508 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 KCPQ6ZWJ8 1503 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 IL2RBP14784 551 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 CASP7P55210 303 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 SKOR2Q2VWA4 1001 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 KIAA1211Q6ZU35 1233 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 EVI5LQ96CN4 794 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 LMBRD1Q9NUN5 540 aa9.63□□□□□ -0.87
PDLIM5-204ENST00000380176 EDC3Q96F86 508 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 NUP188Q5SRE5 1749 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 TOGARAM1Q9Y4F4 1720 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 PAPPAQ13219 1627 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 ERVV-2B6SEH9 535 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 TFCP2Q12800 502 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 RABL6Q3YEC7 729 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 TTC14Q96N46 770 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 COPRSQ9NQ92 184 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 DDX49Q9Y6V7 483 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 NMIQ13287 307 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 ADCK5Q3MIX3 580 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 NDUFB9Q9Y6M9 179 aa9.62□□□□□ -0.87
PDLIM5-204ENST00000380176 EVA1CP58658 441 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 DBNLQ9UJU6 430 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 TJP1Q07157 1748 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 TCHHQ07283 1943 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 A0A0D9SFI3 127 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 DTNBO60941 627 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 PTMSP20962 102 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 AK2P54819 239 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 FOXO4P98177 505 aa9.61□□□□□ -0.87
PDLIM5-204ENST00000380176 KLHL40Q2TBA0 621 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms