RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 COL11A2P13942 1736 aaPredicted RBP6.1□□□□□ -1.43
C9orf72-203ENST00000380003 HDGFL1Q5TGJ6 251 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 FAM9BQ8IZU0 186 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 C8orf58Q8NAV2 365 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 RUNDC1Q96C34 613 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 ZNF831Q5JPB2 1677 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 HTTP42858 3142 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 HTATSF1O43719 755 aaKnown RBP6.1□□□□□ -1.43
C9orf72-203ENST00000380003 CLEC4GQ6UXB4 293 aa6.1□□□□□ -1.43
C9orf72-203ENST00000380003 SCAF8Q9UPN6 1271 aaKnown RBP6.1□□□□□ -1.43
C9orf72-203ENST00000380003 KDM2BQ8NHM5 1336 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 DUSP27Q5VZP5 1158 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 RPGRQ92834 1020 aaKnown RBP6.09□□□□□ -1.43
C9orf72-203ENST00000380003 MKRN1Q9UHC7 482 aaKnown RBP6.09□□□□□ -1.43
C9orf72-203ENST00000380003 TRMT112Q9UI30 125 aaKnown RBP6.09□□□□□ -1.43
C9orf72-203ENST00000380003 SBF1O95248 1867 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 VEGFAP15692 232 aaPredicted RBP6.09□□□□□ -1.43
C9orf72-203ENST00000380003 MAP1SQ66K74 1059 aaPredicted RBP6.09□□□□□ -1.43
C9orf72-203ENST00000380003 GIGYF2Q6Y7W6 1299 aaKnown RBP6.09□□□□□ -1.43
C9orf72-203ENST00000380003 DNAJC5GQ8N7S2 189 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 CNKSR1Q969H4 720 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 CLEC11AQ9Y240 323 aa6.09□□□□□ -1.43
C9orf72-203ENST00000380003 TAF1P21675 1872 aa6.09□□□□□ -1.44
C9orf72-203ENST00000380003 CHL1O00533 1208 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 NTSR2O95665 410 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 NPR1P16066 1061 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 AOC3Q16853 763 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 DPY19L2Q6NUT2 758 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 MRS2Q9HD23 443 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 ZNF34Q8IZ26 560 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 TNRC6CQ9HCJ0 1690 aaKnown RBP6.08□□□□□ -1.44
C9orf72-203ENST00000380003 RIMBP2O15034 1052 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 NLRP10Q86W26 655 aa6.08□□□□□ -1.44
C9orf72-203ENST00000380003 PNISRQ8TF01 805 aaKnown RBP6.08□□□□□ -1.44
C9orf72-203ENST00000380003 COL4A5P29400 1685 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 RAD17O75943 681 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 COL13A1Q5TAT6 717 aaPredicted RBP6.07□□□□□ -1.44
C9orf72-203ENST00000380003 CELF1Q92879 486 aaKnown RBP6.07□□□□□ -1.44
C9orf72-203ENST00000380003 SCN7AQ01118 1682 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 EPS15P42566 896 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 CCDC93Q567U6 631 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 STYK1Q6J9G0 422 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 ANKRD13DQ6ZTN6 518 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 G2E3Q7L622 706 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 LARGE2Q8N3Y3 721 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 NLRP3Q96P20 1036 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 UTP14AQ9BVJ6 771 aaKnown RBP6.07□□□□□ -1.44
C9orf72-203ENST00000380003 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
C9orf72-203ENST00000380003 SEC31BQ9NQW1 1179 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 ZBTB12Q9Y330 459 aaPredicted RBP6.07□□□□□ -1.44
C9orf72-203ENST00000380003 NRXN2Q9P2S2 1712 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 ARFGEF1Q9Y6D6 1849 aa6.07□□□□□ -1.44
C9orf72-203ENST00000380003 CWF19L2Q2TBE0 894 aaKnown RBP6.06□□□□□ -1.44
C9orf72-203ENST00000380003 RIC3Q7Z5B4 369 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 CFAP44Q96MT7 982 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 MYD88Q99836 296 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 NSFL1CQ9UNZ2 370 aaKnown RBP6.06□□□□□ -1.44
C9orf72-203ENST00000380003 ABCC4O15439 1325 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 LAMA3Q16787 3333 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 COL4A1P02462 1669 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 ERVV-1B6SEH8 477 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 TRAF5O00463 557 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 PPEF1O14829 653 aaPredicted RBP6.06□□□□□ -1.44
C9orf72-203ENST00000380003 IARSP41252 1262 aaKnown RBP6.06□□□□□ -1.44
C9orf72-203ENST00000380003 CRY2Q49AN0 593 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 DDX21Q9NR30 783 aaKnown RBP eCLIP6.06□□□□□ -1.44
C9orf72-203ENST00000380003 SZT2Q5T011 3432 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 LAMA2P24043 3122 aaKnown RBP6.06□□□□□ -1.44
C9orf72-203ENST00000380003 NUP98P52948 1817 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 PPIP5K2O43314 1243 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 ALDH1B1P30837 517 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 TCIRG1Q13488 830 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 DOK7Q18PE1 504 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 JDP2Q8WYK2 163 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 DBNDD1Q9H9R9 158 aa6.06□□□□□ -1.44
C9orf72-203ENST00000380003 KLRG2A4D1S0 409 aaPredicted RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 SNAP23O00161 211 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 EGFRP00533 1210 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 APLP1P51693 650 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 FKBP4Q02790 459 aaKnown RBP eCLIP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 RBM26Q5T8P6 1007 aaKnown RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 PPP1R42Q7Z4L9 355 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 SMC1BQ8NDV3 1235 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 NYXQ9GZU5 481 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 PI4KAP2A4QPH2 592 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 ZNF316A6NFI3 1004 aaPredicted RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 LMOD3Q0VAK6 560 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 KDM3BQ7LBC6 1761 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 PI4KAP1Q8N8J0 262 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 TAF1DQ9H5J8 278 aaPredicted RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 ZNF408Q9H9D4 720 aa6.05□□□□□ -1.44
C9orf72-203ENST00000380003 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 DBF4Q9UBU7 674 aaPredicted RBP6.05□□□□□ -1.44
C9orf72-203ENST00000380003 F6X3S4 739 aa6.04□□□□□ -1.44
C9orf72-203ENST00000380003 PAXIP1Q6ZW49 1069 aaPredicted RBP6.04□□□□□ -1.44
C9orf72-203ENST00000380003 WWC1Q8IX03 1113 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms