RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 ALDH1L1O75891 902 aa30.89■■■□□ 2.54
TM6SF1-204ENST00000379390 TRIM28Q13263 835 aaKnown RBP30.89■■■□□ 2.54
TM6SF1-204ENST00000379390 TM4SF1P30408 202 aa30.88■■■□□ 2.53
TM6SF1-204ENST00000379390 DDR1Q08345 913 aa30.88■■■□□ 2.53
TM6SF1-204ENST00000379390 GCKRQ14397 625 aa30.88■■■□□ 2.53
TM6SF1-204ENST00000379390 MMP10P09238 476 aa30.87■■■□□ 2.53
TM6SF1-204ENST00000379390 MVPQ14764 893 aaKnown RBP30.87■■■□□ 2.53
TM6SF1-204ENST00000379390 PARP10Q53GL7 1025 aa30.87■■■□□ 2.53
TM6SF1-204ENST00000379390 SUSD4Q5VX71 490 aa30.87■■■□□ 2.53
TM6SF1-204ENST00000379390 NRXN2Q9P2S2 1712 aa30.87■■■□□ 2.53
TM6SF1-204ENST00000379390 RTL5Q5HYW3 569 aaPredicted RBP30.86■■■□□ 2.53
TM6SF1-204ENST00000379390 DDX60Q8IY21 1712 aaKnown RBP30.85■■■□□ 2.53
TM6SF1-204ENST00000379390 LAMB2P55268 1798 aa30.85■■■□□ 2.53
TM6SF1-204ENST00000379390 JARID2Q92833 1246 aaPredicted RBP30.85■■■□□ 2.53
TM6SF1-204ENST00000379390 MTFR1LQ9H019 292 aa30.85■■■□□ 2.53
TM6SF1-204ENST00000379390 MYH3P11055 1940 aa30.85■■■□□ 2.53
TM6SF1-204ENST00000379390 POLRMTO00411 1230 aaKnown RBP30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 CRBNQ96SW2 442 aa30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 TRMT112Q9UI30 125 aaKnown RBP30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 ATF5Q9Y2D1 282 aaPredicted RBP30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 NTSR2O95665 410 aa30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 NBPF5PQ86XG9 351 aaPredicted RBP30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 C9orf78Q9NZ63 289 aaPredicted RBP30.84■■■□□ 2.53
TM6SF1-204ENST00000379390 GRM8O00222 908 aa30.83■■■□□ 2.53
TM6SF1-204ENST00000379390 UBE3BQ7Z3V4 1068 aa30.83■■■□□ 2.53
TM6SF1-204ENST00000379390 PPP1R42Q7Z4L9 355 aa30.83■■■□□ 2.53
TM6SF1-204ENST00000379390 MEIS3Q99687 375 aa30.83■■■□□ 2.53
TM6SF1-204ENST00000379390 UTP14AQ9BVJ6 771 aaKnown RBP30.83■■■□□ 2.53
TM6SF1-204ENST00000379390 USP44Q9H0E7 712 aa30.83■■■□□ 2.53
TM6SF1-204ENST00000379390 NUTM1Q86Y26 1132 aa30.82■■■□□ 2.52
TM6SF1-204ENST00000379390 SYNE4Q8N205 404 aa30.82■■■□□ 2.52
TM6SF1-204ENST00000379390 FAM89AQ96GI7 184 aa30.82■■■□□ 2.52
TM6SF1-204ENST00000379390 SERPINB2P05120 415 aa30.81■■■□□ 2.52
TM6SF1-204ENST00000379390 IBTKQ9P2D0 1353 aaPredicted RBP30.81■■■□□ 2.52
TM6SF1-204ENST00000379390 NBPF7P0C2Y1 421 aaPredicted RBP30.8■■■□□ 2.52
TM6SF1-204ENST00000379390 DDX19BQ9UMR2 479 aa30.8■■■□□ 2.52
TM6SF1-204ENST00000379390 PARP3Q9Y6F1 533 aa30.8■■■□□ 2.52
TM6SF1-204ENST00000379390 ANKRD31Q8N7Z5 1873 aa30.8■■■□□ 2.52
TM6SF1-204ENST00000379390 NPHP1O15259 732 aa30.8■■■□□ 2.52
TM6SF1-204ENST00000379390 ZBTB38Q8NAP3 1195 aaPredicted RBP30.8■■■□□ 2.52
TM6SF1-204ENST00000379390 PCCAP05165 728 aaPredicted RBP30.79■■■□□ 2.52
TM6SF1-204ENST00000379390 CCDC24Q8N4L8 307 aa30.79■■■□□ 2.52
TM6SF1-204ENST00000379390 CNBD1Q8NA66 436 aa30.79■■■□□ 2.52
TM6SF1-204ENST00000379390 NYXQ9GZU5 481 aa30.79■■■□□ 2.52
TM6SF1-204ENST00000379390 TNRC6CQ9HCJ0 1690 aaKnown RBP30.78■■■□□ 2.52
TM6SF1-204ENST00000379390 ABCC12Q96J65 1359 aa30.78■■■□□ 2.52
TM6SF1-204ENST00000379390 SH3TC1Q8TE82 1336 aa30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 H7C1W4 665 aa30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 ZBTB7BO15156 539 aaPredicted RBP30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 GTF2E1P29083 439 aaPredicted RBP30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 ERFEQ4G0M1 354 aa30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 TPTE2Q6XPS3 522 aa30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 UTYO14607 1347 aa30.77■■■□□ 2.52
TM6SF1-204ENST00000379390 CASP7P55210 303 aa30.76■■■□□ 2.52
TM6SF1-204ENST00000379390 PRR5LQ6MZQ0 368 aa30.76■■■□□ 2.52
TM6SF1-204ENST00000379390 UBTFL1P0CB47 393 aaPredicted RBP30.76■■■□□ 2.51
TM6SF1-204ENST00000379390 EXOC6Q8TAG9 804 aa30.75■■■□□ 2.51
TM6SF1-204ENST00000379390 GNAI3P08754 354 aa30.73■■■□□ 2.51
TM6SF1-204ENST00000379390 IRS4O14654 1257 aaPredicted RBP30.73■■■□□ 2.51
TM6SF1-204ENST00000379390 NEFLP07196 543 aa30.73■■■□□ 2.51
TM6SF1-204ENST00000379390 HCLS1P14317 486 aaPredicted RBP30.73■■■□□ 2.51
TM6SF1-204ENST00000379390 POLD1P28340 1107 aa30.73■■■□□ 2.51
TM6SF1-204ENST00000379390 CDHR2Q9BYE9 1310 aa30.72■■■□□ 2.51
TM6SF1-204ENST00000379390 SUCLG2Q96I99 432 aa30.72■■■□□ 2.51
TM6SF1-204ENST00000379390 SGIP1Q9BQI5 828 aa30.72■■■□□ 2.51
TM6SF1-204ENST00000379390 C1orf115Q9H7X2 142 aa30.72■■■□□ 2.51
TM6SF1-204ENST00000379390 PTGER2P43116 358 aa30.71■■■□□ 2.51
TM6SF1-204ENST00000379390 LRRFIP2Q9Y608 721 aaKnown RBP30.71■■■□□ 2.51
TM6SF1-204ENST00000379390 KIF13BQ9NQT8 1826 aa30.71■■■□□ 2.51
TM6SF1-204ENST00000379390 ST5P78524 1137 aa30.7■■■□□ 2.51
TM6SF1-204ENST00000379390 ZBTB40Q9NUA8 1239 aa30.7■■■□□ 2.51
TM6SF1-204ENST00000379390 SPON1Q9HCB6 807 aa30.69■■■□□ 2.5
TM6SF1-204ENST00000379390 KAZALD1Q96I82 304 aa30.69■■■□□ 2.5
TM6SF1-204ENST00000379390 COL11A2P13942 1736 aaPredicted RBP30.68■■■□□ 2.5
TM6SF1-204ENST00000379390 EPHA10Q5JZY3 1008 aa30.68■■■□□ 2.5
TM6SF1-204ENST00000379390 TAF1P21675 1872 aa30.67■■■□□ 2.5
TM6SF1-204ENST00000379390 GNAI2P04899 355 aa30.67■■■□□ 2.5
TM6SF1-204ENST00000379390 CHMP4BQ9H444 224 aaKnown RBP30.67■■■□□ 2.5
TM6SF1-204ENST00000379390 C10orf71Q711Q0 1435 aa30.66■■■□□ 2.5
TM6SF1-204ENST00000379390 BICC1Q9H694 974 aaKnown RBP30.66■■■□□ 2.5
TM6SF1-204ENST00000379390 RIC1Q4ADV7 1423 aa30.66■■■□□ 2.5
TM6SF1-204ENST00000379390 SLC10A5Q5PT55 438 aa30.65■■■□□ 2.5
TM6SF1-204ENST00000379390 C3orf67Q6ZVT6 689 aa30.65■■■□□ 2.5
TM6SF1-204ENST00000379390 PDE8AO60658 829 aa30.65■■■□□ 2.5
TM6SF1-204ENST00000379390 FOXO4P98177 505 aa30.64■■■□□ 2.5
TM6SF1-204ENST00000379390 PLA2G12BQ9BX93 195 aa30.64■■■□□ 2.5
TM6SF1-204ENST00000379390 SRCAPQ6ZRS2 3230 aa30.64■■■□□ 2.5
TM6SF1-204ENST00000379390 SPEF2Q9C093 1822 aa30.64■■■□□ 2.49
TM6SF1-204ENST00000379390 CACNA1SQ13698 1873 aa30.64■■■□□ 2.49
TM6SF1-204ENST00000379390 CTSWP56202 376 aa30.63■■■□□ 2.49
TM6SF1-204ENST00000379390 CCDC85AQ96PX6 553 aaPredicted RBP30.62■■■□□ 2.49
TM6SF1-204ENST00000379390 HDAC5Q9UQL6 1122 aa30.62■■■□□ 2.49
TM6SF1-204ENST00000379390 HSP90B1P14625 803 aaKnown RBP30.62■■■□□ 2.49
TM6SF1-204ENST00000379390 ANKRD44Q8N8A2 993 aa30.62■■■□□ 2.49
TM6SF1-204ENST00000379390 NLRP3Q96P20 1036 aa30.61■■■□□ 2.49
TM6SF1-204ENST00000379390 BRIP1Q9BX63 1249 aa30.61■■■□□ 2.49
TM6SF1-204ENST00000379390 KIAA1551Q9HCM1 1747 aa30.6■■■□□ 2.49
TM6SF1-204ENST00000379390 LMBR1LQ6UX01 489 aa30.6■■■□□ 2.49
TM6SF1-204ENST00000379390 DLEC1Q9Y238 1755 aa30.6■■■□□ 2.49
TM6SF1-204ENST00000379390 CHMP3Q9Y3E7 222 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms